Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 1.0e-51 206.5 103 100.0
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 3.3e-50 201.4 103 96.1
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 2.1e-49 198.7 103 96.1
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.8e-48 195.7 103 93.2
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 3.4e-47 191.4 99 94.9
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 5.8e-47 190.7 99 93.9
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.3e-46 189.5 97 94.8
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.3e-46 189.5 97 94.8
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 2.2e-46 188.7 99 92.9
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 2.2e-46 188.7 99 91.9
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 2.2e-46 188.7 99 91.9
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 2.9e-46 188.3 99 91.9
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 2.9e-46 188.3 99 91.9
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 4.9e-46 187.6 95 95.8
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 6.4e-46 187.2 99 90.9
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 6.4e-46 187.2 99 90.9
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 8.3e-46 186.8 99 90.9
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 8.3e-46 186.8 99 90.9
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 8.3e-46 186.8 99 90.9
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 1.4e-45 186.0 101 89.1
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 2.4e-45 185.3 99 89.9
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 2.4e-45 185.3 99 89.9
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 3.2e-45 184.9 98 89.8
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 4.1e-45 184.5 99 88.9
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 5.4e-45 184.1 99 88.9
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 5.4e-45 184.1 99 89.9
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 9.2e-45 183.3 99 89.9
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 1.2e-44 183.0 99 90.9
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 1.2e-44 183.0 97 88.7
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 1.2e-44 183.0 97 88.7
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 1.2e-44 183.0 104 86.5
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 1.6e-44 182.6 97 88.7
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 2.7e-44 181.8 99 87.9
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 2.7e-44 181.8 97 89.7
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 3.5e-44 181.4 97 87.6
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 4.6e-44 181.0 99 86.9
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 4.6e-44 181.0 104 85.6
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 6.0e-44 180.6 96 89.6
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 6.0e-44 180.6 99 86.9
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 6.0e-44 180.6 102 83.3
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 7.8e-44 180.3 99 87.9
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 1.0e-43 179.9 96 90.6
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 1.0e-43 179.9 103 83.5
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 1.0e-43 179.9 97 87.6
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 1.3e-43 179.5 97 88.7
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 1.7e-43 179.1 99 87.9
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 2.3e-43 178.7 101 85.1
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 2.3e-43 178.7 102 82.4
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 3.0e-43 178.3 99 86.9
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 3.9e-43 177.9 102 83.3
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 3.9e-43 177.9 101 84.2
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 3.9e-43 177.9 101 84.2
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 3.9e-43 177.9 99 85.9
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 3.9e-43 177.9 101 84.2
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 3.9e-43 177.9 101 84.2
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 5.0e-43 177.6 101 84.2
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 6.6e-43 177.2 101 84.2
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 6.6e-43 177.2 97 86.6
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 8.6e-43 176.8 96 88.5
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 8.6e-43 176.8 96 88.5
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 8.6e-43 176.8 102 83.3
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 1.1e-42 176.4 101 84.2
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 1.9e-42 175.6 97 86.6
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.9e-42 175.6 94 89.4
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.9e-42 175.6 94 89.4
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 2.5e-42 175.3 96 87.5
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 2.5e-42 175.3 97 85.6
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 3.3e-42 174.9 101 83.2
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 3.3e-42 174.9 101 83.2
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 3.3e-42 174.9 101 83.2
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 3.3e-42 174.9 101 83.2
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 3.3e-42 174.9 95 87.4
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 3.3e-42 174.9 99 84.8
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 4.3e-42 174.5 102 82.4
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 4.3e-42 174.5 101 82.2
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 5.6e-42 174.1 99 82.8
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 5.6e-42 174.1 95 86.3
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 7.3e-42 173.7 96 87.5
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 7.3e-42 173.7 96 86.5
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 7.3e-42 173.7 96 86.5
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 7.3e-42 173.7 96 86.5
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 7.3e-42 173.7 99 84.8
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 7.3e-42 173.7 96 86.5
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 9.5e-42 173.3 99 81.8
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 9.5e-42 173.3 99 81.8
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.2e-41 172.9 102 81.4
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.2e-41 172.9 102 81.4
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 1.2e-41 172.9 94 88.3
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 1.6e-41 172.6 99 82.8
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 1.6e-41 172.6 97 85.6
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 1.6e-41 172.6 97 84.5
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 1.6e-41 172.6 99 82.8
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 2.1e-41 172.2 96 85.4
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 2.8e-41 171.8 96 85.4
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 2.8e-41 171.8 96 85.4
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 3.6e-41 171.4 96 85.4
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 3.6e-41 171.4 99 83.8
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 4.7e-41 171.0 99 81.8
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 4.7e-41 171.0 99 81.8
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 4.7e-41 171.0 99 81.8
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 6.2e-41 170.6 99 81.8
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 6.2e-41 170.6 99 81.8
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 8.0e-41 170.2 94 86.2
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 8.0e-41 170.2 99 81.8
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 1.1e-40 169.9 95 83.2
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 1.4e-40 169.5 101 80.2
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 1.8e-40 169.1 99 80.8
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 1.8e-40 169.1 99 80.8
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 8.9e-40 166.8 94 83.0
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 1.5e-39 166.0 100 83.0
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 4.4e-39 164.5 98 81.6
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 8.3e-38 160.2 121 66.9
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 2.9e-30 135.2 99 71.7
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 3.2e-29 131.7 97 69.1
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.6e-28 129.4 78 78.2
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 3.6e-25 118.2 90 64.4
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.8e-24 115.9 90 62.2
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 5.2e-24 114.4 88 60.2
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 1.3e-22 109.8 91 57.1
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 1.7e-22 109.4 85 60.0
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 9.2e-21 103.6 90 55.6
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 3.9e-19 98.2 90 56.7
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 1.9e-18 95.9 52 88.5
TAR626G0394 Trochodendron aralioides HOM05D005994 ORTHO05D007322 1.9e-18 95.9 51 90.2
Medtr2g097750 Medicago truncatula HOM05D005994 ORTHO05D007322 9.6e-18 93.6 59 76.3
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 2.1e-17 92.4 56 75.0
Dinv10313 Davidia involucrata HOM05D005994 ORTHO05D007322 5.3e-16 87.8 94 55.3
Nitab4.5_0005540g0030 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.5e-15 86.3 52 82.7
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.6e-15 85.5 51 80.4
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 3.4e-15 85.1 95 51.6
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 7.6e-15 84.0 87 47.1
Zm00001eb041720 Zea mays HOM05D005994 ORTHO05D007322 2.1e-12 75.9 55 67.3
TAR627G0003 Trochodendron aralioides HOM05D005994 ORTHO05D007322 5.6e-10 67.8 43 79.1


User provided reference genes

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