Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.128 Capsicum annuum HOM05D008272 ORTHO05D010429 2.5e-141 505.4 248 100.0
PGR031G2232 Punica granatum HOM05D008272 ORTHO05D010429 4.6e-82 308.5 260 60.8
Haze_09670 Corylus avellana HOM05D008272 ORTHO05D010429 1.5e-77 293.5 265 58.1
Eucgr.F03464 Eucalyptus grandis HOM05D008272 ORTHO05D010429 6.0e-74 281.6 304 51.0
CiPaw.12G129300 Carya illinoinensis HOM05D008272 ORTHO05D010429 3.0e-73 279.3 286 52.4
QL08p010511 Quercus lobata HOM05D008272 ORTHO05D010429 3.0e-73 279.3 305 50.2
Cc05_g13720 Coffea canephora HOM05D008272 ORTHO05D010429 1.9e-72 276.6 296 53.4
arahy.Tifrunner.gnm1.ann1.MV6CSW Arachis hypogaea HOM05D008272 ORTHO05D010429 8.1e-71 271.2 294 51.0
arahy.Tifrunner.gnm1.ann1.UDA7AK Arachis hypogaea HOM05D008272 ORTHO05D010429 3.1e-70 269.2 288 51.0
Manes.15G072400 Manihot esculenta HOM05D008272 ORTHO05D010429 5.2e-70 268.5 284 52.1
Cpa.g.sc97.8 Carica papaya HOM05D008272 ORTHO05D010429 8.9e-70 267.7 286 50.0
Thecc.07G038600 Theobroma cacao HOM05D008272 ORTHO05D010429 8.9e-70 267.7 294 50.3
Gohir.D01G066300 Gossypium hirsutum HOM05D008272 ORTHO05D010429 3.4e-69 265.8 291 48.5
Ciclev10008983m.g Citrus clementina HOM05D008272 ORTHO05D010429 4.4e-69 265.4 304 47.0
GSVIVG01037640001 Vitis vinifera HOM05D008272 ORTHO05D010429 4.4e-69 265.4 307 48.5
Duzib170G0415 Durio zibethinus HOM05D008272 ORTHO05D010429 7.5e-69 264.6 287 49.8
Lalb_Chr17g0348421 Lupinus albus HOM05D008272 ORTHO05D010429 9.9e-69 264.2 283 50.5
Potri.011G138900 Populus trichocarpa HOM05D008272 ORTHO05D010429 9.9e-69 264.2 285 50.2
MBI02_g22115_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 1.3e-68 263.8 212 61.3
VMungo0647G0594 Vigna mungo HOM05D008272 ORTHO05D010429 2.2e-68 263.1 281 51.2
CiPaw.11G188800 Carya illinoinensis HOM05D008272 ORTHO05D010429 6.4e-68 261.5 294 48.3
MBI16_g12297_MAGBIO Magnolia biondii HOM05D008272 ORTHO05D010429 8.3e-68 261.2 154 79.2
Hund01995 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.9e-67 260.0 267 52.1
ClCG10G005430 Citrullus lanatus HOM05D008272 ORTHO05D010429 3.2e-67 259.2 294 48.6
Gohir.A01G079200 Gossypium hirsutum HOM05D008272 ORTHO05D010429 4.1e-67 258.8 291 47.8
Eucgr.F00768 Eucalyptus grandis HOM05D008272 ORTHO05D010429 6.0e-66 255.0 287 47.7
ATR0752G027 Amborella trichopoda HOM05D008272 ORTHO05D010429 8.6e-65 251.1 256 52.7
Hund23252 Selenicereus undatus HOM05D008272 ORTHO05D010429 1.1e-64 250.8 339 44.8
COL.COLO4_09657 Corchorus olitorius HOM05D008272 ORTHO05D010429 1.5e-64 250.4 185 67.0
MELO3C025383.2 Cucumis melo HOM05D008272 ORTHO05D010429 1.5e-64 250.4 294 47.6
Lj1A872T54 Lonicera japonica HOM05D008272 ORTHO05D010429 9.5e-64 247.7 301 46.8
CsaV3_3G005170 Cucumis sativus L. HOM05D008272 ORTHO05D010429 2.8e-63 246.1 298 47.3
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.6e-63 245.7 248 51.2
Thecc.07G038700 Theobroma cacao HOM05D008272 ORTHO05D010429 4.7e-63 245.4 185 65.4
Migut.M01769 Erythranthe guttata HOM05D008272 ORTHO05D010429 4.0e-62 242.3 243 53.1
Hma1.2p1_1162F.1_g262620 Hydrangea macrophylla HOM05D008272 ORTHO05D010429 7.6e-61 238.0 187 63.1
HPP92_011139 Vanilla planifolia HOM05D008272 ORTHO05D010429 1.1e-59 234.2 298 46.3
RcHm_v2.0_Chr5g0039361 Rosa chinensis HOM05D008272 ORTHO05D010429 1.9e-59 233.4 187 61.0
Gorai.002G088200 Gossypium raimondii HOM05D008272 ORTHO05D010429 5.4e-59 231.9 291 43.6
Hund14975 Selenicereus undatus HOM05D008272 ORTHO05D010429 5.4e-59 231.9 343 41.4
EL10Ac4g07813 Beta vulgaris HOM05D008272 ORTHO05D010429 6.0e-58 228.4 282 46.8
PGR083G1743 Punica granatum HOM05D008272 ORTHO05D010429 2.3e-57 226.5 294 43.5
Os04g0625200 Oryza sativa ssp. japonica HOM05D008272 ORTHO05D010429 1.5e-56 223.8 187 59.9
FAN24G3338 Fragaria x ananassa HOM05D008272 ORTHO05D010429 6.2e-55 218.4 282 45.7
SMO119G0124 Selaginella moellendorffii HOM05D008272 ORTHO05D010429 5.8e-53 211.8 187 56.1
Duzib213G0361 Durio zibethinus HOM05D008272 ORTHO05D010429 4.8e-47 192.2 250 45.6
FvH4_2g04690 Fragaria vesca HOM05D008272 ORTHO05D010429 7.4e-40 168.3 247 43.3
Sc03g0008620 Simmondsia chinensis HOM05D008272 ORTHO05D010429 9.6e-40 167.9 193 48.2
VMungo0540G1205 Vigna mungo HOM05D008272 ORTHO05D010429 6.2e-39 165.2 214 45.8
Sabra11G0124700 Salix brachista HOM05D008272 ORTHO05D010429 1.5e-37 160.6 142 55.6
Nn004s41404 Nelumbo nucifera HOM05D008272 ORTHO05D010429 7.6e-37 158.3 191 48.7
Sabra11G0124400 Salix brachista HOM05D008272 ORTHO05D010429 1.5e-32 144.1 134 56.0
unitig_578.g15997 Utricularia gibba HOM05D008272 ORTHO05D010429 3.7e-31 139.4 83 74.7
MD11G1219100 Malus domestica HOM05D008272 ORTHO05D010429 2.9e-28 129.8 213 40.4
Sc16g0006090 Simmondsia chinensis HOM05D008272 ORTHO05D010429 1.2e-26 124.4 217 39.6
Phvul.L001633 Phaseolus vulgaris HOM05D008272 ORTHO05D010429 8.7e-25 118.2 73 69.9
Cfa020968 Carpinus fangiana HOM05D008272 ORTHO05D010429 6.5e-20 102.1 56 76.8
MD03G1201900 Malus domestica HOM05D008272 ORTHO05D010429 2.7e-18 96.7 58 77.6
arahy.Tifrunner.gnm1.ann1.39PYJI Arachis hypogaea HOM05D008272 ORTHO05D010429 1.8e-17 94.0 71 66.2
Oeu020117.1 Olea europaea HOM05D008272 ORTHO05D010429 5.3e-06 55.8 74 44.6


User provided reference genes

Program Settings