Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G334.2 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-43 177.6 83 100.0
CAN.G1134.15 Capsicum annuum HOM05D000679 ORTHO05D000137 8.2e-36 153.3 82 84.1
CAN.G2326.1 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-35 151.8 82 81.7
CAN.G1316.3 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-34 148.3 82 81.7
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-34 147.5 81 82.7
CAN.G453.11 Capsicum annuum HOM05D000679 ORTHO05D000137 5.0e-33 144.1 82 79.3
CAN.G53.24 Capsicum annuum HOM05D000679 ORTHO05D000137 6.5e-33 143.7 82 79.3
CAN.G639.25 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-32 142.5 82 78.0
CAN.G211.8 Capsicum annuum HOM05D000679 ORTHO05D000137 5.7e-29 130.6 82 73.2
CAN.G1226.29 Capsicum annuum HOM05D000679 ORTHO05D000137 2.8e-28 128.3 70 82.9
CAN.G633.6 Capsicum annuum HOM05D000679 ORTHO05D000137 2.8e-28 128.3 70 84.3
CAN.G809.2 Capsicum annuum HOM05D000679 ORTHO05D000137 2.8e-28 128.3 71 81.7
CAN.G956.2 Capsicum annuum HOM05D000679 ORTHO05D000137 3.7e-28 127.9 71 81.7
CAN.G1006.3 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-27 126.3 71 77.5
CAN.G933.8 Capsicum annuum HOM05D000679 ORTHO05D000137 2.0e-26 122.1 70 80.0
CAN.G53.11 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-26 121.7 76 72.4
CAN.G337.146 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-25 119.8 70 77.1
CAN.G1541.2 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-25 117.9 70 75.7
CAN.G1273.10 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-25 116.7 90 62.2
CAN.G358.114 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-24 116.3 86 65.1
CAN.G89.22 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-22 109.4 82 63.4
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 8.8e-22 106.7 91 57.1
CAN.G1217.9 Capsicum annuum HOM05D000679 ORTHO05D000137 8.8e-22 106.7 82 61.0
CAN.G1721.1 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-21 105.9 62 75.8
CAN.G473.114 Capsicum annuum HOM05D000679 ORTHO05D000137 2.0e-21 105.5 78 64.1
CAN.G1093.7 Capsicum annuum HOM05D000679 ORTHO05D000137 3.3e-21 104.8 86 59.3
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 3.3e-21 104.8 81 63.0
CAN.G375.82 Capsicum annuum HOM05D000679 ORTHO05D000137 3.3e-21 104.8 61 80.3
CAN.G105.2 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-20 102.8 81 61.7
CAN.G249.14 Capsicum annuum HOM05D000679 ORTHO05D000137 4.8e-20 100.9 71 63.4
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-19 99.0 57 77.2
CAN.G472.2 Capsicum annuum HOM05D000679 ORTHO05D000137 3.1e-19 98.2 78 62.8
CAN.G341.8 Capsicum annuum HOM05D000679 ORTHO05D000137 4.1e-19 97.8 93 52.7
CAN.G1328.9 Capsicum annuum HOM05D000679 ORTHO05D000137 9.1e-19 96.7 58 74.1
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 9.1e-19 96.7 62 71.0
CAN.G216.4 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-18 96.3 71 64.8
CAN.G1403.1 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-18 94.4 53 79.2
CAN.G437.7 Capsicum annuum HOM05D000679 ORTHO05D000137 4.5e-18 94.4 78 60.3
CAN.G27.24 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-17 91.3 61 67.2
CAN.G756.53 Capsicum annuum HOM05D000679 ORTHO05D000137 8.5e-17 90.1 60 68.3
CAN.G459.40 Capsicum annuum HOM05D000679 ORTHO05D000137 2.5e-16 88.6 58 72.4
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-16 88.2 61 65.6
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 2.7e-15 85.1 61 62.3
CAN.G572.43 Capsicum annuum HOM05D000679 ORTHO05D000137 9.8e-13 76.6 54 63.0
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-12 74.7 82 40.2
Nitab4.5_0005654g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.8e-12 74.3 82 41.5
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 4.8e-12 74.3 77 40.3
Sopen12g024090 Solanum pennellii HOM05D000679 ORTHO05D000137 4.8e-12 74.3 77 41.6
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.3e-12 73.9 82 40.2
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 6.3e-12 73.9 80 41.2
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 6.3e-12 73.9 80 41.2
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 8.3e-12 73.6 82 36.6
Nitab4.5_0010618g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-11 73.2 81 38.3
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-11 72.8 77 40.3
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 1.4e-11 72.8 82 36.6
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.4e-11 72.8 73 43.8
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-11 72.4 48 66.7
CAN.G63.10 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-11 72.4 37 86.5
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.1e-11 71.6 82 39.0
Sopen07g004240 Solanum pennellii HOM05D000635 ORTHO05D000488 4.1e-11 71.2 80 38.8
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.1e-11 71.2 82 39.0
CAN.G185.2 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-11 70.9 59 59.3
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.4e-11 70.9 79 39.2
Solyc07g041820.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 5.4e-11 70.9 82 35.4
Solyc12g017670.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 5.4e-11 70.9 82 36.6
CAN.G43.27 Capsicum annuum HOM05D000679 ORTHO05D000137 7.0e-11 70.5 55 61.8
Nitab4.5_0008167g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.1e-11 70.1 80 40.0
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.1e-11 70.1 82 37.8
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 9.1e-11 70.1 77 40.3
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-10 69.7 82 39.0
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-10 69.7 82 37.8
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 1.2e-10 69.7 77 40.3
Sopen06g010730 Solanum pennellii HOM05D000679 ORTHO05D000137 1.2e-10 69.7 72 40.3
Nitab4.5_0000596g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-10 69.3 82 36.6
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-10 68.9 76 42.1
Nitab4.5_0011642g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.0e-10 68.9 82 39.0
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.7e-10 68.6 74 43.2
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 2.7e-10 68.6 77 39.0
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.5e-10 68.2 73 42.5
Nitab4.5_0002373g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.9e-10 67.4 81 38.3
Nitab4.5_0001030g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-09 66.6 74 40.5
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-09 66.6 82 39.0
Nitab4.5_0002879g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-09 66.2 78 38.5
CAN.G208.34 Capsicum annuum HOM05D000679 ORTHO05D000137 2.2e-09 65.5 82 46.3
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.2e-09 65.5 82 37.8
CAN.G682.2 Capsicum annuum HOM05D000679 ORTHO05D000137 2.9e-09 65.1 37 81.1
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.9e-09 65.1 70 42.9
Sopen09g020980 Solanum pennellii HOM05D000679 ORTHO05D000137 3.8e-09 64.7 77 39.0
Nitab4.5_0001140g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.0e-09 64.3 72 40.3
PGSC0003DMG400020014 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.5e-09 63.5 94 36.2
Nitab4.5_0001140g0240 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.1e-08 63.2 73 41.1
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-08 62.8 73 39.7
Sopen03g025990 Solanum pennellii HOM05D000679 ORTHO05D030640 1.5e-08 62.8 78 37.2
Nitab4.5_0011890g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.9e-08 62.4 70 41.4
CAN.G1054.3 Capsicum annuum HOM05D000679 ORTHO05D000137 2.5e-08 62.0 40 72.5
Nitab4.5_0000632g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 62.0 82 37.8
Nitab4.5_0000692g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 62.0 72 41.7
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 62.0 76 38.2
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-08 62.0 73 42.5
PGSC0003DMG400038255 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.5e-08 62.0 94 35.1
CAN.G284.12 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-08 61.6 36 77.8
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.2e-08 61.6 82 34.1
Sopen05g020660 Solanum pennellii HOM05D000541 ORTHO05D000137 3.2e-08 61.6 94 36.2
CAN.G1187.2 Capsicum annuum HOM05D000679 ORTHO05D000137 4.2e-08 61.2 41 68.3
Nitab4.5_0002356g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.2e-08 61.2 70 41.4
Nitab4.5_0002755g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.2e-08 61.2 74 37.8
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 37.2
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 39.4
Sopen02g028490 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 39.4
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 39.4
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 37.2
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 4.2e-08 61.2 94 37.2
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 5.5e-08 60.8 94 37.2
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 7.2e-08 60.5 94 34.0
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 7.2e-08 60.5 94 35.1
Nitab4.5_0008167g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.4e-08 60.1 70 40.0
Solyc01g094723.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.4e-08 60.1 82 36.6
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 9.4e-08 60.1 82 36.6
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 9.4e-08 60.1 82 36.6
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 9.4e-08 60.1 82 36.6
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 9.4e-08 60.1 82 36.6
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT11G0656 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT25G3489 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT54G0660 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT54G0860 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT56G1233 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-07 59.7 84 34.5
CAN.G1089.23 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-07 59.7 27 92.6
Sopen03g030630 Solanum pennellii HOM05D000541 ORTHO05D000137 1.2e-07 59.7 94 37.2
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 1.2e-07 59.7 94 38.3
Sopen00g005360 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-07 59.3 94 35.1
Sopen01g017990 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-07 59.3 94 35.1
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 1.6e-07 59.3 93 37.6
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-07 58.9 70 40.0
Nitab4.5_0003730g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-07 58.9 72 37.5
Sopen04g012950 Solanum pennellii HOM05D000679 ORTHO05D014686 2.1e-07 58.9 71 40.8
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-07 58.9 94 37.2
Nitab4.5_0000444g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.6e-07 58.2 67 40.3
Sopen12g015350 Solanum pennellii HOM05D000541 ORTHO05D000137 3.6e-07 58.2 94 36.2
CAN.G341.3 Capsicum annuum HOM05D000679 ORTHO05D000137 4.7e-07 57.8 41 63.4
CAN.G1222.17 Capsicum annuum HOM05D000679 ORTHO05D000137 6.1e-07 57.4 80 41.2
Nitab4.5_0000207g0350 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.1e-07 57.4 67 38.8
Nitab4.5_0000347g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.1e-07 57.4 82 34.1
Nitab4.5_0000814g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.1e-07 57.4 70 38.6
Nitab4.5_0001816g0180 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.0e-07 57.0 69 40.6
PGSC0003DMG400007650 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.0e-07 57.0 91 36.3
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 8.0e-07 57.0 75 34.7
CANSAT54G2329 Cannabis sativa HOM05D008636 ORTHO05D000137 1.0e-06 56.6 76 35.5
CAN.G546.31 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-06 56.6 41 63.4
Nitab4.5_0003772g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-06 56.6 72 40.3
Nitab4.5_0000648g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-06 56.2 70 37.1
CAN.G269.4 Capsicum annuum HOM05D000679 ORTHO05D000137 1.8e-06 55.8 41 63.4
CAN.G168.29 Capsicum annuum HOM05D000679 ORTHO05D000137 2.3e-06 55.5 33 75.8
CAN.G1374.15 Capsicum annuum HOM05D000541 ORTHO05D000137 3.0e-06 55.1 82 31.7
Nitab4.5_0007600g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.0e-06 55.1 82 31.7
CAN.G208.33 Capsicum annuum HOM05D000679 ORTHO05D000137 4.0e-06 54.7 41 63.4
Nitab4.5_0001361g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.0e-06 54.7 70 37.1
Solyc11g042805.1 Solanum lycopersicum HOM05D009268 ORTHO05D000137 4.0e-06 54.7 36 61.1
CANSAT25G0378 Cannabis sativa HOM05D000679 ORTHO05D000137 5.2e-06 54.3 76 36.8
Sopen09g022190 Solanum pennellii HOM05D000679 ORTHO05D014686 6.8e-06 53.9 73 37.0
CAN.G1302.4 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 53.5 82 31.7
CAN.G134.50 Capsicum annuum HOM05D000541 ORTHO05D000137 8.8e-06 53.5 82 30.5
Solyc09g150106.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 8.8e-06 53.5 36 61.1


User provided reference genes

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