Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G331.5 Capsicum annuum HOM05D000794 ORTHO05D000616 1.9e-193 679.1 375 100.0
PGSC0003DMG400022058 Solanum tuberosum HOM05D000794 ORTHO05D000616 1.6e-126 456.8 363 77.4
Sopen11g023410 Solanum pennellii HOM05D000794 ORTHO05D000616 1.8e-122 443.4 361 71.7
Solyc11g056650.2 Solanum lycopersicum HOM05D000794 ORTHO05D000616 1.3e-120 437.2 361 70.6
Nitab4.5_0000175g0070 Nicotiana tabacum HOM05D000794 ORTHO05D000616 1.7e-120 436.8 371 71.4
Nitab4.5_0002278g0070 Nicotiana tabacum HOM05D000794 ORTHO05D000616 1.6e-118 430.3 377 69.5
Nitab4.5_0001925g0040 Nicotiana tabacum HOM05D000794 ORTHO05D000616 3.2e-71 273.1 384 48.2
Peaxi162Scf00062g01420 Petunia axillaris HOM05D000794 ORTHO05D000616 6.7e-69 265.4 378 52.1
Peaxi162Scf00839g00233 Petunia axillaris HOM05D000794 ORTHO05D000616 2.6e-65 253.4 370 47.8
CAN.G575.53 Capsicum annuum HOM05D000794 ORTHO05D000616 1.3e-64 251.1 383 48.3
PGSC0003DMG400023852 Solanum tuberosum HOM05D000794 ORTHO05D000616 5.0e-64 249.2 372 50.0
Solyc12g100140.3 Solanum lycopersicum HOM05D000794 ORTHO05D000616 1.0e-61 241.5 372 46.2
Sopen12g034770 Solanum pennellii HOM05D000794 ORTHO05D000616 1.8e-61 240.7 372 46.2
Nitab4.5_0010082g0040 Nicotiana tabacum HOM05D000794 ORTHO05D000616 1.7e-59 234.2 359 45.7
Oeu035711.1 Olea europaea HOM05D000794 ORTHO05D000616 9.8e-36 155.2 355 36.6
Cc01_g04410 Coffea canephora HOM05D000794 ORTHO05D000616 1.3e-35 154.8 378 37.3
Actinidia06881 Actinidia chinensis HOM05D000794 ORTHO05D000616 3.8e-32 143.3 353 33.7
Dinv36291 Davidia involucrata HOM05D000794 ORTHO05D000616 1.0e-29 135.2 363 34.2
Dinv08044 Davidia involucrata HOM05D000794 ORTHO05D000616 8.8e-29 132.1 345 33.9
CSS0030604 Camellia sinensis var. sinensis HOM05D000794 ORTHO05D000616 1.5e-28 131.3 355 34.9
Actinidia16303 Actinidia chinensis HOM05D000794 ORTHO05D000616 1.3e-27 128.3 322 31.4
DCAR_023757 Daucus carota HOM05D000794 ORTHO05D000616 4.2e-23 113.2 367 28.1
Oeu055811.1 Olea europaea HOM05D000794 ORTHO05D000616 6.1e-22 109.4 337 30.3
Oeu024451.3 Olea europaea HOM05D000794 ORTHO05D000616 1.8e-21 107.8 326 31.6
GSVIVG01025313001 Vitis vinifera HOM05D000794 ORTHO05D000616 2.3e-21 107.5 159 42.8
Oeu055808.1 Olea europaea HOM05D000794 ORTHO05D000616 5.2e-21 106.3 337 30.3
vmacro04180 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 2.6e-20 104.0 358 33.0
Lsat_1_v5_gn_6_48561 Lactuca sativa HOM05D000794 ORTHO05D000616 5.4e-18 96.3 351 28.5
Hund07542 Selenicereus undatus HOM05D000794 ORTHO05D000616 5.4e-18 96.3 374 29.7
EL10Ac4g10307 Beta vulgaris HOM05D000794 ORTHO05D000616 7.0e-18 95.9 394 29.7
MD03G1023200 Malus domestica HOM05D000794 ORTHO05D000616 9.2e-18 95.5 364 29.7
CiPaw.13G164300 Carya illinoinensis HOM05D000794 ORTHO05D000616 1.6e-17 94.7 355 27.9
Haze_23074 Corylus avellana HOM05D000794 ORTHO05D000616 1.6e-17 94.7 360 27.2
vmacro04179 Vaccinium macrocarpon HOM05D000794 ORTHO05D000616 1.6e-17 94.7 181 39.8
FAN16G2983 Fragaria x ananassa HOM05D000794 ORTHO05D000616 2.0e-17 94.4 387 26.9
Manes.06G167700 Manihot esculenta HOM05D000794 ORTHO05D000616 3.5e-17 93.6 375 27.5
Thecc.09G226600 Theobroma cacao HOM05D000794 ORTHO05D000616 1.0e-16 92.0 371 28.3
FAN21G1013 Fragaria x ananassa HOM05D000794 ORTHO05D000616 2.3e-16 90.9 375 27.5
Lj2A649T47 Lonicera japonica HOM05D000794 ORTHO05D000616 2.3e-16 90.9 368 29.6
SGA_v2.0_scaffold247G44835 Striga asiatica HOM05D000794 ORTHO05D000616 2.9e-16 90.5 349 28.4
Cfa009722 Carpinus fangiana HOM05D000794 ORTHO05D000616 2.5e-15 87.4 358 27.9
FAN11G0318 Fragaria x ananassa HOM05D000794 ORTHO05D000616 2.5e-15 87.4 374 25.4
FvH4_3g43280 Fragaria vesca HOM05D000794 ORTHO05D000616 3.3e-15 87.0 374 25.4
VMungo1127G2181 Vigna mungo HOM05D000794 ORTHO05D000616 3.3e-15 87.0 356 28.1
FAN25G3836 Fragaria x ananassa HOM05D000794 ORTHO05D000616 5.6e-15 86.3 381 24.9
AUR62019260 Chenopodium quinoa HOM05D000794 ORTHO05D000616 2.1e-14 84.3 198 37.4
MD11G1028100 Malus domestica HOM05D000794 ORTHO05D000616 2.1e-14 84.3 375 28.8
Lj3g0005882 Lotus japonicus HOM05D000794 ORTHO05D000616 2.8e-14 84.0 353 27.2
Gohir.D05G070900 Gossypium hirsutum HOM05D000794 ORTHO05D000616 6.2e-14 82.8 354 27.1
Medtr2g098310 Medicago truncatula HOM05D000794 ORTHO05D000616 8.0e-14 82.4 331 28.1
QL01p005692 Quercus lobata HOM05D000794 ORTHO05D000616 8.0e-14 82.4 156 39.1
Migut.D00568 Erythranthe guttata HOM05D000794 ORTHO05D000616 1.4e-13 81.6 347 30.3
Glyma.13G341700 Glycine max HOM05D000794 ORTHO05D000616 1.4e-13 81.6 151 35.1
Ca_20578_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 1.8e-13 81.3 349 25.8
RcHm_v2.0_Chr5g0077341 Rosa chinensis HOM05D000794 ORTHO05D000616 1.8e-13 81.3 377 24.7
Prupe.6G022200 Prunus persica HOM05D000794 ORTHO05D000616 2.3e-13 80.9 363 27.5
Lalb_Chr24g0396981 Lupinus albus HOM05D000794 ORTHO05D000616 3.1e-13 80.5 358 26.3
TAR623G0922 Trochodendron aralioides HOM05D000794 ORTHO05D000616 3.1e-13 80.5 352 28.7
MELO3C015207.2 Cucumis melo HOM05D000794 ORTHO05D000616 4.0e-13 80.1 372 28.0
Phvul.011G057400 Phaseolus vulgaris HOM05D000794 ORTHO05D000616 4.0e-13 80.1 356 27.2
Duzib168G1008 Durio zibethinus HOM05D000794 ORTHO05D000616 6.8e-13 79.3 373 27.1
Potri.001G017300 Populus trichocarpa HOM05D000794 ORTHO05D000616 6.8e-13 79.3 332 25.9
Rhsim13G0224500 Rhododendron simsii HOM05D000794 ORTHO05D000616 6.8e-13 79.3 383 29.2
SGA_v2.0_scaffold3G01536 Striga asiatica HOM05D000794 ORTHO05D000616 6.8e-13 79.3 347 27.4
Gorai.009G071900 Gossypium raimondii HOM05D000794 ORTHO05D000616 8.9e-13 79.0 356 27.2
Sabra01G0012100 Salix brachista HOM05D000794 ORTHO05D000616 8.9e-13 79.0 365 26.3
SalBow4G0116 Salvia bowleyana HOM05D000794 ORTHO05D000616 8.9e-13 79.0 339 28.3
Sed0020680 Sechium edule HOM05D000794 ORTHO05D000616 8.9e-13 79.0 360 27.5
ClCG03G013380 Citrullus lanatus HOM05D000794 ORTHO05D000616 1.2e-12 78.6 381 27.6
CsaV3_1G042640 Cucumis sativus L. HOM05D000794 ORTHO05D000616 1.2e-12 78.6 370 27.6
DCAR_002048 Daucus carota HOM05D000794 ORTHO05D000616 1.2e-12 78.6 362 27.3
Sc09g0000510 Simmondsia chinensis HOM05D000794 ORTHO05D000616 2.0e-12 77.8 357 28.6
AUR62000088 Chenopodium quinoa HOM05D000794 ORTHO05D000616 2.6e-12 77.4 198 34.8
Potri.003G207200 Populus trichocarpa HOM05D000794 ORTHO05D000616 2.6e-12 77.4 368 25.8
Prupe.2G009100 Prunus persica HOM05D000794 ORTHO05D000616 3.4e-12 77.0 356 27.5
Eucgr.J00796 Eucalyptus grandis HOM05D000794 ORTHO05D000616 4.4e-12 76.6 335 30.1
Glyma.12G055400 Glycine max HOM05D000794 ORTHO05D000616 4.4e-12 76.6 355 25.6
SalBow4G2902 Salvia bowleyana HOM05D000794 ORTHO05D000616 7.5e-12 75.9 338 28.1
CANSAT54G2065 Cannabis sativa HOM05D000794 ORTHO05D000616 9.8e-12 75.5 373 27.6
Eucgr.B03669 Eucalyptus grandis HOM05D000794 ORTHO05D000616 9.8e-12 75.5 148 34.5
COL.COLO4_24830 Corchorus olitorius HOM05D000794 ORTHO05D000616 1.3e-11 75.1 382 27.2
Psat5g288240 Pisum sativum HOM05D000794 ORTHO05D000616 1.3e-11 75.1 331 26.0
CiPaw.14G122200 Carya illinoinensis HOM05D000794 ORTHO05D000616 1.7e-11 74.7 355 26.8
Manes.14G013300 Manihot esculenta HOM05D000794 ORTHO05D000616 1.7e-11 74.7 361 24.9
Aqoxy1G00271 Aquilegia oxysepala HOM05D000794 ORTHO05D000616 2.2e-11 74.3 351 28.2
Gohir.A05G067900 Gossypium hirsutum HOM05D000794 ORTHO05D000616 2.2e-11 74.3 352 26.7
Cpa.g.sc84.89 Carica papaya HOM05D000794 ORTHO05D000616 2.9e-11 73.9 368 26.4
TWI34G2012 Tripterygium wilfordii HOM05D000794 ORTHO05D000616 3.7e-11 73.6 149 37.6
Ciclev10015437m.g Citrus clementina HOM05D000794 ORTHO05D000616 8.3e-11 72.4 356 26.4
Ca_01280_v3 Cicer arietinum L. HOM05D000794 ORTHO05D000616 1.4e-10 71.6 361 25.2
PGR004G0217 Punica granatum HOM05D000794 ORTHO05D000616 2.4e-10 70.9 160 37.5
Hund22072 Selenicereus undatus HOM05D000794 ORTHO05D000616 5.4e-10 69.7 370 28.4
Sabra03G0152900 Salix brachista HOM05D000794 ORTHO05D000616 9.2e-10 68.9 371 26.1
Hma1.2p1_0728F.1_g209300 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 2.0e-09 67.8 348 30.2
Nn7g36098 Nelumbo nucifera HOM05D000794 ORTHO05D000616 2.7e-09 67.4 350 25.1
FAN06G2728 Fragaria x ananassa HOM05D000794 ORTHO05D000616 7.8e-09 65.9 336 27.1
Glyma.15G032700 Glycine max HOM05D000794 ORTHO05D000616 7.8e-09 65.9 365 24.7
CiPaw.09G033500 Carya illinoinensis HOM05D000794 ORTHO05D000616 1.7e-08 64.7 159 33.3
CDE07G0431 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 1.7e-08 64.7 135 34.1
MSTRG.17578 Avicennia marina HOM05D000794 ORTHO05D000616 3.9e-08 63.5 349 26.4
CDE06G0859 Ceratophyllum demersum HOM05D000794 ORTHO05D000616 5.0e-08 63.2 148 30.4
Duzib150G1464 Durio zibethinus HOM05D000794 ORTHO05D000616 5.0e-08 63.2 354 25.4
FvH4_7g00670 Fragaria vesca HOM05D000794 ORTHO05D000616 5.0e-08 63.2 336 26.8
arahy.Tifrunner.gnm1.ann1.1K2NHD Arachis hypogaea HOM05D000794 ORTHO05D000616 6.6e-08 62.8 353 25.8
arahy.Tifrunner.gnm1.ann1.HQ4J8E Arachis hypogaea HOM05D000794 ORTHO05D000616 6.6e-08 62.8 348 26.1
FAN10G3413 Fragaria x ananassa HOM05D000794 ORTHO05D000616 6.6e-08 62.8 335 26.9
PSO339G5582 Papaver somniferum HOM05D000794 ORTHO05D000616 6.6e-08 62.8 323 27.6
Cfa016883 Carpinus fangiana HOM05D000794 ORTHO05D000616 8.6e-08 62.4 167 31.7
SGA_v2.0_scaffold8G04620 Striga asiatica HOM05D000794 ORTHO05D000616 1.1e-07 62.0 353 28.0
TPR.G13648 Trifolium pratense HOM05D000794 ORTHO05D000616 1.1e-07 62.0 382 23.3
arahy.Tifrunner.gnm1.ann1.Y2E5VB Arachis hypogaea HOM05D000794 ORTHO05D000616 2.5e-07 60.8 353 26.1
ECA233G3932 Erigeron canadensis HOM05D000794 ORTHO05D000616 2.5e-07 60.8 147 37.4
FAN03G1148 Fragaria x ananassa HOM05D000794 ORTHO05D000616 3.3e-07 60.5 338 26.9
HanXRQChr02g0056251 Helianthus annuus HOM05D000794 ORTHO05D000616 3.3e-07 60.5 369 26.6
Actinidia21564 Actinidia chinensis HOM05D000794 ORTHO05D000616 4.3e-07 60.1 276 26.1
FAN01G1314 Fragaria x ananassa HOM05D000794 ORTHO05D000616 5.6e-07 59.7 345 26.4
FAN01G1851 Fragaria x ananassa HOM05D000794 ORTHO05D000616 5.6e-07 59.7 345 26.4
Lsat_1_v5_gn_2_101000 Lactuca sativa HOM05D000794 ORTHO05D000616 5.6e-07 59.7 351 25.9
Psat6g101360 Pisum sativum HOM05D000794 ORTHO05D000616 5.6e-07 59.7 152 32.2
Psat7g213560 Pisum sativum HOM05D000794 ORTHO05D000616 5.6e-07 59.7 369 24.1
Atru.chr3.2555 Acer truncatum HOM05D000794 ORTHO05D000616 7.3e-07 59.3 349 24.6
AUR62043582 Chenopodium quinoa HOM05D000794 ORTHO05D000616 7.3e-07 59.3 137 35.8
Haze_19931 Corylus avellana HOM05D000794 ORTHO05D000616 9.5e-07 58.9 165 31.5
PGR119G1081 Punica granatum HOM05D000794 ORTHO05D000616 9.5e-07 58.9 115 37.4
COL.COLO4_28740 Corchorus olitorius HOM05D000794 ORTHO05D000616 1.6e-06 58.2 167 31.7
Medtr4g065870 Medicago truncatula HOM05D000794 ORTHO05D000616 1.6e-06 58.2 352 26.7
PSO384G1452 Papaver somniferum HOM05D000794 ORTHO05D000616 2.1e-06 57.8 323 26.6
Potri.009G064700 Populus trichocarpa HOM05D000794 ORTHO05D000616 2.8e-06 57.4 351 23.9
Sabra06G0040700 Salix brachista HOM05D000794 ORTHO05D000616 2.8e-06 57.4 181 30.9
Ah.06g193570 Amaranthus hybridus HOM05D000794 ORTHO05D000616 4.7e-06 56.6 401 29.9
Hma1.2p1_0929F.1_g237920 Hydrangea macrophylla HOM05D000794 ORTHO05D000616 6.2e-06 56.2 177 28.8
PGR102G2941 Punica granatum HOM05D000794 ORTHO05D000616 8.1e-06 55.8 146 33.6


User provided reference genes

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