Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.2e-211 739.6 376 100.0
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.1e-202 707.6 376 95.5
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.1e-199 699.9 376 93.6
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 3.1e-199 698.4 376 94.7
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.0e-199 698.0 376 94.4
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.0e-190 669.1 376 89.6
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 6.1e-187 657.5 398 85.7
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.3e-170 602.4 369 81.8
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 5.7e-161 571.2 387 76.7
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 9.1e-159 563.9 377 76.4
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.2e-158 563.5 376 75.8
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 4.5e-158 561.6 376 76.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.1e-156 557.0 369 75.9
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 5.5e-156 554.7 385 73.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.2e-156 554.3 374 75.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 7.2e-156 554.3 390 74.1
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.4e-156 553.9 389 72.5
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 9.4e-156 553.9 369 76.4
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.7e-155 552.4 384 73.7
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.6e-155 552.0 376 74.2
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 6.1e-155 551.2 389 73.5
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.0e-154 548.5 390 73.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 5.2e-154 548.1 368 76.1
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.2e-154 548.1 389 71.5
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 5.2e-154 548.1 363 74.9
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 8.8e-154 547.4 389 72.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 4.4e-153 545.0 386 71.8
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 7.5e-153 544.3 384 72.4
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 9.8e-153 543.9 384 73.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 9.8e-153 543.9 381 72.7
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 9.8e-153 543.9 350 79.7
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 9.8e-153 543.9 367 74.9
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.7e-152 543.1 373 75.1
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.2e-152 542.7 383 72.8
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 4.9e-152 541.6 378 72.8
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 8.3e-152 540.8 388 72.9
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.4e-151 540.0 367 74.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-151 539.7 374 73.8
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.1e-151 538.9 374 73.5
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.1e-151 538.9 374 73.5
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 3.1e-151 538.9 387 72.1
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 3.1e-151 538.9 385 71.9
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 3.1e-151 538.9 385 71.9
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.1e-151 537.3 374 73.3
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 1.6e-150 536.6 409 69.4
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.0e-150 536.2 379 72.6
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 2.0e-150 536.2 362 74.6
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 4.5e-150 535.0 353 76.8
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 4.5e-150 535.0 353 76.5
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 4.5e-150 535.0 385 72.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.5e-150 535.0 362 74.3
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.7e-150 534.3 357 74.5
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 7.7e-150 534.3 390 71.0
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.9e-149 532.3 386 71.2
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 6.6e-149 531.2 362 75.1
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.6e-149 531.2 371 73.3
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 1.5e-148 530.0 385 69.6
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 5.5e-148 528.1 368 74.5
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 9.5e-148 527.3 392 69.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 9.5e-148 527.3 374 72.7
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 9.5e-148 527.3 382 72.3
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.2e-147 526.9 374 72.2
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.8e-147 525.8 355 73.5
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 3.6e-147 525.4 342 76.3
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 3.6e-147 525.4 386 71.0
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 4.7e-147 525.0 414 67.6
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 6.1e-147 524.6 378 71.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 8.0e-147 524.2 371 71.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 1.0e-146 523.9 361 73.1
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.0e-146 523.9 349 74.5
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-146 523.5 372 71.5
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.4e-146 523.5 355 73.8
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.8e-146 523.1 366 74.3
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 8.9e-146 520.8 379 70.7
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.2e-145 520.4 364 71.4
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.2e-145 520.4 355 73.5
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 1.5e-145 520.0 356 73.9
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.0e-145 519.6 395 67.8
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 2.6e-145 519.2 366 73.2
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 7.5e-145 517.7 357 73.9
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 9.8e-145 517.3 356 73.3
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.3e-144 516.9 340 75.3
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 1.7e-144 516.5 385 69.1
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 2.2e-144 516.2 351 73.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 3.7e-144 515.4 346 76.3
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 3.7e-144 515.4 356 73.9
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.1e-143 513.8 384 71.1
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.8e-143 513.1 371 72.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 2.4e-143 512.7 355 72.4
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.2e-143 512.3 371 72.0
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 7.0e-143 511.1 386 69.4
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 7.0e-143 511.1 355 72.4
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.2e-143 510.8 365 71.2
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.2e-143 510.8 365 71.2
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 9.2e-143 510.8 365 71.2
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 9.2e-143 510.8 354 72.6
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.2e-142 510.4 371 71.7
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.6e-142 510.0 339 76.4
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.7e-142 509.2 387 69.0
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 4.6e-142 508.4 365 71.0
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 7.8e-142 507.7 383 69.5
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.3e-141 506.9 388 69.1
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.7e-141 506.5 384 68.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.7e-141 506.5 346 71.7
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.9e-141 505.4 365 70.7
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.9e-141 505.4 365 70.7
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 5.0e-141 505.0 407 67.8
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 6.6e-141 504.6 385 68.6
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 8.6e-141 504.2 320 74.7
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 1.9e-140 503.1 357 71.7
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 4.3e-140 501.9 334 73.4
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 6.1e-139 498.0 375 69.6
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 2.3e-138 496.1 324 74.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.1e-138 495.7 349 70.8
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 6.8e-138 494.6 379 67.8
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.4e-137 491.9 384 68.8
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 7.5e-137 491.1 361 69.0
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 9.8e-137 490.7 329 72.9
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.2e-136 489.6 347 70.9
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.7e-136 488.8 369 67.5
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.4e-135 486.9 475 56.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 5.4e-135 485.0 381 67.5
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-133 479.6 353 68.6
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 3.0e-133 479.2 386 67.4
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.6e-131 472.2 386 64.2
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 8.1e-131 471.1 297 76.8
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 1.4e-127 460.3 271 80.4
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.1e-127 458.8 370 67.0
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.5e-126 455.7 354 67.5
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 8.6e-125 451.1 321 66.7
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.1e-124 450.7 388 63.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.9e-124 449.9 385 63.9
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 2.3e-122 443.0 313 65.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 4.0e-122 442.2 295 75.3
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 9.9e-121 437.6 286 73.4
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 9.2e-119 431.0 317 70.7
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.3e-117 427.2 324 67.3
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 8.6e-117 424.5 354 60.2
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.6e-117 424.5 314 63.4
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.5e-116 422.9 341 59.8
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.1e-114 417.5 347 61.1
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 4.0e-114 415.6 251 80.5
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.2e-111 405.6 326 61.3
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 7.1e-111 404.8 417 55.4
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 2.3e-109 399.8 241 82.2
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 6.6e-109 398.3 361 58.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.7e-109 397.9 315 61.0
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 5.6e-100 368.6 385 55.1
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.6e-99 367.1 221 79.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 9.3e-87 324.7 355 49.0
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 7.4e-84 315.1 221 67.4
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.3e-75 287.7 237 64.1
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.6e-62 243.0 150 78.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.0e-61 240.0 366 43.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.6e-54 217.6 202 57.4
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.5e-52 211.1 171 66.1
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 5.9e-41 172.6 175 54.9
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.5e-31 140.6 94 72.3
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.0e-29 135.2 279 32.3
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 4.9e-27 126.3 101 64.4
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.9e-25 119.4 250 38.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.7e-24 117.9 374 27.0
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 2.1e-22 110.9 313 27.8
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 5.2e-21 106.3 65 75.4
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 6.0e-17 92.8 66 69.7
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 6.0e-17 92.8 66 69.7
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.3e-16 90.9 66 69.7
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-15 88.2 59 72.9
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.1e-13 82.0 78 57.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.3e-13 80.9 377 23.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.3e-13 80.9 91 58.2
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 7.5e-12 75.9 90 55.6
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 5.4e-10 69.7 151 29.1
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 7.8e-09 65.9 33 87.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 2.5e-07 60.8 41 68.3
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 4.3e-07 60.1 41 65.9
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 7.3e-07 59.3 39 69.2
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 9.5e-07 58.9 35 74.3


User provided reference genes

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