Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.6e-55 219.2 108 100.0
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.0e-38 163.3 154 57.8
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 8.7e-38 160.2 154 53.9
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.9e-37 159.1 154 55.2
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 5.7e-29 131.0 154 47.4
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 9.7e-29 130.2 154 46.1
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 1.3e-28 129.8 152 46.7
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 8.2e-28 127.1 154 44.8
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 1.8e-27 125.9 152 44.7
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 2.4e-27 125.6 152 46.7
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 3.1e-27 125.2 152 45.4
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 4.1e-27 124.8 154 44.2
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 5.3e-27 124.4 154 42.9
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 5.3e-27 124.4 152 44.1
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 6.9e-27 124.0 152 43.4
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 9.1e-27 123.6 150 46.0
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 9.1e-27 123.6 154 44.2
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.2e-26 123.2 154 44.2
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.2e-26 123.2 154 43.5
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 1.5e-26 122.9 152 43.4
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 1.5e-26 122.9 152 44.7
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 1.5e-26 122.9 152 44.7
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 1.5e-26 122.9 152 45.4
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 2.0e-26 122.5 154 42.2
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 2.0e-26 122.5 154 43.5
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 2.0e-26 122.5 154 42.9
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 2.6e-26 122.1 154 42.2
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 2.6e-26 122.1 152 42.8
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 2.6e-26 122.1 152 44.1
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 2.6e-26 122.1 154 42.2
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 3.4e-26 121.7 152 44.1
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 5.9e-26 120.9 152 42.8
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 7.7e-26 120.6 154 42.2
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 7.7e-26 120.6 152 43.4
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 7.7e-26 120.6 151 42.4
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 1.3e-25 119.8 152 42.8
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 1.3e-25 119.8 154 42.9
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 2.2e-25 119.0 152 42.1
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 2.2e-25 119.0 152 42.8
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 3.8e-25 118.2 152 43.4
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 5.0e-25 117.9 152 43.4
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 5.0e-25 117.9 154 41.6
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 8.5e-25 117.1 154 40.9
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 2.5e-24 115.5 154 40.9
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 1.6e-23 112.8 154 41.6
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 2.1e-23 112.5 152 41.4
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 4.7e-23 111.3 154 40.3
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 6.1e-23 110.9 153 41.2
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 1.4e-22 109.8 152 41.4
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 1.1e-21 106.7 154 40.3
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 1.1e-21 106.7 154 40.3
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.5e-21 106.3 154 40.3
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 4.4e-21 104.8 152 36.2
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 3.7e-20 101.7 156 39.1
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 6.3e-20 100.9 153 37.9
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 1.1e-19 100.1 154 39.0
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.1e-19 100.1 154 39.0
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 1.1e-19 100.1 154 38.3
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 1.4e-19 99.8 149 38.3
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 1.4e-19 99.8 153 38.6
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 6.9e-19 97.4 152 38.2
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 2.6e-18 95.5 149 36.9
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 1.0e-17 93.6 154 38.3
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 2.5e-16 89.0 154 33.1
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 9.4e-16 87.0 156 32.7
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 9.4e-16 87.0 110 47.3
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 2.3e-14 82.4 142 36.6
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 5.2e-14 81.3 142 34.5
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 2.0e-13 79.3 122 36.1
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 1.7e-12 76.3 58 58.6
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.5e-10 68.6 155 29.7
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 3.2e-08 62.0 53 56.6
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 3.6e-07 58.5 55 49.1
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 1.0e-06 57.0 52 46.2
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.8e-06 56.2 153 27.5
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 2.3e-06 55.8 57 50.9


User provided reference genes

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