Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 6.3e-82 307.4 155 100.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.6e-59 232.3 139 85.6
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 4.8e-45 184.9 120 81.7
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 6.2e-45 184.5 104 80.8
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 4.0e-44 181.8 135 65.2
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 5.3e-44 181.4 135 65.2
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 9.0e-44 180.6 162 59.9
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 5.8e-43 177.9 101 82.2
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 9.9e-43 177.2 101 78.2
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.3e-42 176.8 87 90.8
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.3e-42 176.8 94 86.2
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.7e-42 176.4 94 85.1
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.9e-41 172.9 166 54.8
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 1.9e-41 172.9 95 82.1
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.4e-41 172.6 166 57.8
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 3.2e-41 172.2 108 73.1
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 7.1e-41 171.0 125 66.4
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 7.1e-41 171.0 93 81.7
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.2e-40 170.2 101 76.2
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.7e-40 169.1 96 79.2
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 4.6e-40 168.3 95 78.9
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 6.0e-40 167.9 154 59.7
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.0e-40 167.9 101 75.2
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 7.8e-40 167.5 147 60.5
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 1.0e-39 167.2 156 56.4
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.7e-39 166.4 131 62.6
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.7e-39 166.4 94 79.8
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 2.3e-39 166.0 98 75.5
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 3.0e-39 165.6 86 82.6
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 3.9e-39 165.2 91 81.3
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 3.9e-39 165.2 140 60.0
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 5.1e-39 164.9 99 77.8
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.1e-39 164.9 101 74.3
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 5.1e-39 164.9 92 78.3
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 6.6e-39 164.5 88 84.1
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 6.6e-39 164.5 138 60.9
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.1e-38 163.7 123 62.6
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 1.1e-38 163.7 94 77.7
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 1.5e-38 163.3 93 81.7
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.5e-38 163.3 114 66.7
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 3.3e-38 162.2 141 58.9
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 4.3e-38 161.8 148 56.8
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 4.3e-38 161.8 86 86.0
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 4.3e-38 161.8 96 76.0
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 5.6e-38 161.4 144 56.2
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 5.6e-38 161.4 99 74.7
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 5.6e-38 161.4 73 97.3
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 7.3e-38 161.0 87 82.8
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.3e-38 161.0 127 63.0
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 7.3e-38 161.0 81 86.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.3e-38 161.0 94 78.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 1.3e-37 160.2 95 74.7
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 2.1e-37 159.5 160 53.8
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.1e-37 159.5 95 72.6
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 3.6e-37 158.7 96 75.0
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 1.4e-36 156.8 96 72.9
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.4e-36 156.8 92 78.3
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.8e-36 156.4 87 79.3
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 1.8e-36 156.4 97 75.3
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 3.1e-36 155.6 89 79.8
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.0e-36 155.2 96 75.0
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 9.0e-36 154.1 111 68.5
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 9.0e-36 154.1 111 68.5
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 9.0e-36 154.1 88 75.0
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.5e-35 153.3 79 83.5
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.5e-35 153.3 79 83.5
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 1.5e-35 153.3 154 55.8
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 2.0e-35 152.9 86 80.2
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.0e-35 152.9 85 76.5
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 3.4e-35 152.1 123 59.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 7.6e-35 151.0 147 57.1
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 9.9e-35 150.6 153 54.9
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.3e-34 150.2 87 74.7
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 1.7e-34 149.8 73 87.7
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.2e-34 149.4 106 62.3
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 2.2e-34 149.4 107 63.6
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.1e-33 147.1 103 67.0
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.9e-33 146.4 71 85.9
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.1e-32 142.9 120 60.0
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.7e-32 142.5 97 67.0
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 4.6e-32 141.7 77 84.4
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 6.0e-32 141.4 89 69.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.3e-31 140.2 67 94.0
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 5.1e-31 138.3 76 81.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.1e-30 137.1 144 53.5
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 1.9e-30 136.3 80 71.2
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 3.3e-30 135.6 72 83.3
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 8.1e-29 131.0 132 56.1
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 4.0e-28 128.6 66 81.8
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.5e-27 126.7 66 80.3
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.5e-27 126.7 68 83.8
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.0e-27 126.3 69 84.1
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.0e-26 124.0 70 80.0
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 3.2e-25 119.0 74 71.6
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.2e-24 117.1 170 44.7
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.0e-23 114.0 72 62.5
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 8.7e-23 110.9 66 74.2
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 7.6e-19 97.8 80 61.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.7e-18 96.7 80 60.0
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 9.3e-17 90.9 63 52.4
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.8e-07 60.1 37 64.9
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 3.3e-06 55.8 54 50.0


User provided reference genes

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