Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 1.6e-239 832.4 429 100.0
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 2.8e-212 741.9 395 95.7
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 1.2e-210 736.5 395 94.9
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 1.5e-197 693.0 404 89.1
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 9.4e-184 647.1 395 85.6
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 6.1e-183 644.4 381 87.9
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 7.9e-175 617.5 402 79.1
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 5.1e-174 614.8 428 76.4
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 1.1e-173 613.6 430 74.9
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 1.8e-171 606.3 430 74.0
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 9.1e-171 604.0 402 78.1
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 2.6e-170 602.4 402 78.4
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 1.0e-169 600.5 398 77.1
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 2.2e-169 599.4 430 72.1
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 2.9e-169 599.0 397 78.3
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 4.2e-168 595.1 397 77.8
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 5.5e-168 594.7 430 73.5
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 9.4e-168 594.0 401 76.6
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 1.6e-167 593.2 431 72.6
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 2.3e-166 589.3 398 76.6
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 6.7e-166 587.8 416 73.8
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 2.0e-165 586.3 388 78.1
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 9.7e-165 583.9 430 71.2
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 9.7e-165 583.9 430 72.3
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 1.7e-164 583.2 430 71.4
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 8.2e-164 580.9 398 75.4
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 1.1e-163 580.5 430 70.0
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.4e-163 579.3 432 70.4
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 4.1e-163 578.6 400 75.0
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 7.0e-163 577.8 429 72.3
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.2e-162 577.0 388 76.3
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 1.0e-161 573.9 401 74.3
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 6.5e-161 571.2 401 74.3
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 2.5e-160 569.3 429 69.9
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 2.5e-160 569.3 430 71.9
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 3.2e-160 568.9 402 75.6
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 1.2e-159 567.0 385 75.3
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 1.6e-159 566.6 388 75.8
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.7e-159 565.8 402 73.6
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 3.6e-159 565.5 402 73.6
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 4.7e-159 565.1 402 73.4
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 8.0e-159 564.3 422 71.3
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.4e-158 563.5 402 73.6
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 3.0e-158 562.4 385 74.8
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 3.0e-158 562.4 397 73.3
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 4.0e-158 562.0 385 74.5
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 5.2e-158 561.6 391 74.2
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 6.7e-158 561.2 385 74.0
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 6.7e-158 561.2 398 74.1
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 1.2e-157 560.5 389 73.5
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 3.3e-157 558.9 397 72.8
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 4.4e-157 558.5 427 71.0
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 4.4e-157 558.5 431 71.0
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 7.5e-157 557.8 389 72.8
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 1.3e-156 557.0 415 71.6
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 2.2e-156 556.2 387 73.9
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 2.8e-156 555.8 402 72.4
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 2.8e-156 555.8 402 72.4
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 6.3e-156 554.7 387 73.6
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 6.3e-156 554.7 387 73.6
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 8.2e-156 554.3 393 72.3
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 1.1e-155 553.9 430 68.4
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.8e-155 553.1 393 72.5
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 2.4e-155 552.7 430 67.4
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 3.1e-155 552.4 421 67.9
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 4.1e-155 552.0 385 73.0
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 5.3e-155 551.6 388 73.7
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 7.0e-155 551.2 393 72.0
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 1.2e-154 550.4 388 73.5
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-154 550.1 385 72.5
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-154 550.1 385 72.7
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 1.6e-154 550.1 386 73.1
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 1.6e-154 550.1 385 72.5
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 2.7e-154 549.3 385 73.2
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 5.9e-154 548.1 391 73.4
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.8e-153 545.4 403 71.2
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 3.8e-153 545.4 399 73.9
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 5.0e-153 545.0 386 72.8
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 5.0e-153 545.0 384 73.7
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 5.0e-153 545.0 388 72.4
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 5.0e-153 545.0 430 68.6
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 6.5e-153 544.7 425 71.1
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 1.1e-152 543.9 386 72.8
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 1.6e-151 540.0 430 70.0
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 4.7e-151 538.5 430 69.1
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.8e-150 536.6 373 75.3
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 1.2e-149 533.9 391 73.4
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 4.4e-149 531.9 429 66.2
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 7.5e-149 531.2 390 71.5
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 4.8e-148 528.5 385 71.7
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 8.3e-148 527.7 394 68.5
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 1.1e-147 527.3 425 67.8
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.6e-146 523.5 421 67.7
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 5.0e-145 518.5 369 72.9
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.1e-144 517.3 383 68.9
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 2.5e-144 516.2 397 68.0
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 2.5e-144 516.2 397 68.0
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 3.6e-143 512.3 425 64.7
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 3.6e-143 512.3 402 68.2
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 8.0e-143 511.1 371 73.0
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 1.4e-142 510.4 397 67.8
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 2.3e-142 509.6 441 64.4
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 1.2e-141 507.3 437 65.4
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 7.5e-141 504.6 407 69.3
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 3.1e-139 499.2 425 62.8
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 4.5e-138 495.4 519 56.3
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.3e-137 493.0 389 68.1
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 8.6e-137 491.1 395 64.6
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 2.1e-135 486.5 390 64.1
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 3.6e-135 485.7 421 60.8
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 6.8e-126 454.9 706 43.2
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 6.4e-124 448.4 388 62.6
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 1.7e-121 440.3 377 64.2
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 9.5e-112 407.9 346 66.2
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 8.4e-108 394.8 395 54.4
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 3.5e-106 389.4 388 55.2
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.1e-102 376.3 392 54.6
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 5.1e-97 359.0 382 51.8
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 4.3e-96 355.9 365 54.0
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 9.6e-96 354.8 394 50.8
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 7.9e-82 308.5 391 45.8
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 5.3e-78 295.8 178 80.9
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 8.5e-68 261.9 194 73.7
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.1e-62 245.0 216 59.3
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 1.0e-60 238.4 176 71.6
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 1.6e-58 231.1 143 78.3
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.6e-58 229.9 216 56.5
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 3.6e-58 229.9 216 56.5
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 1.0e-57 228.4 265 49.4
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 4.8e-55 219.5 130 81.5
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 2.9e-52 210.3 129 83.7
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 1.1e-51 208.4 215 53.5
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 3.9e-49 199.9 137 70.1
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 8.0e-42 175.6 161 60.9
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 8.8e-33 145.6 85 80.0
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.1e-30 138.7 87 74.7
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 7.0e-30 136.0 86 72.1
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-28 129.4 92 73.9
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 1.9e-27 127.9 200 34.5
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-26 122.9 79 70.9
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 4.0e-25 120.2 81 66.7
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 4.7e-18 96.7 83 63.9
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 4.7e-18 96.7 83 63.9
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 2.5e-11 74.3 48 77.1


User provided reference genes

Program Settings