Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 5.9e-85 318.2 253 100.0
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.2e-60 236.5 255 83.9
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.0e-56 223.4 252 81.7
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 3.7e-55 219.2 255 82.0
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 3.3e-51 206.1 253 79.8
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 9.5e-51 204.5 257 77.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 3.0e-49 199.5 253 79.1
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.0e-36 157.9 250 68.8
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.3e-35 152.5 249 68.3
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 2.1e-34 150.2 261 67.4
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 6.2e-34 148.7 255 67.5
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.5e-32 144.1 246 67.1
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 2.0e-32 143.7 258 54.3
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 3.4e-32 142.9 254 66.5
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.4e-32 142.5 204 49.5
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.3e-31 141.0 250 66.0
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.9e-31 139.8 246 65.4
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 1.1e-30 137.9 249 67.1
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.4e-30 137.5 249 65.1
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 4.1e-30 136.0 256 62.9
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 5.4e-30 135.6 248 66.1
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-29 134.4 253 64.0
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-29 134.4 253 62.5
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 3.5e-29 132.9 252 65.1
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 4.6e-29 132.5 241 67.6
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.3e-28 131.0 197 65.5
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.7e-28 130.6 252 63.5
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 3.9e-28 129.4 253 62.5
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 6.6e-28 128.6 238 64.3
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 8.6e-28 128.3 240 66.2
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 8.6e-28 128.3 246 62.2
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 8.6e-28 128.3 238 66.4
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.5e-27 127.5 243 62.6
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 3.3e-27 126.3 262 60.7
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 5.6e-27 125.6 270 59.6
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 9.5e-27 124.8 254 63.0
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.2e-26 124.4 261 61.7
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 2.1e-26 123.6 240 63.8
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.6e-26 122.9 250 63.2
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 6.2e-26 122.1 78 75.6
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.8e-25 120.6 237 66.7
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 4.0e-25 119.4 253 51.8
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.0e-25 119.4 237 65.8
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.2e-25 119.0 239 66.5
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.2e-25 119.0 237 66.2
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.2e-24 117.9 264 61.4
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.6e-24 116.7 235 65.1
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 7.5e-24 115.2 245 60.0
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 9.9e-24 114.8 248 63.7
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.3e-23 114.4 251 61.4
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.7e-23 114.0 240 64.6
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 2.2e-23 113.6 241 62.2
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 2.2e-23 113.6 241 62.2
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 2.9e-23 113.2 69 75.4
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.9e-23 113.2 299 54.8
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 3.7e-23 112.8 69 75.4
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 3.7e-23 112.8 258 60.5
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 3.7e-23 112.8 240 62.1
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 3.7e-23 112.8 250 60.4
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 3.7e-23 112.8 83 66.3
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 6.4e-23 112.1 81 69.1
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 6.4e-23 112.1 247 61.5
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 6.4e-23 112.1 247 61.5
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 1.1e-22 111.3 270 58.1
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.4e-22 110.9 256 61.7
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 2.4e-22 110.2 272 59.6
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 3.2e-22 109.8 68 75.0
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 3.2e-22 109.8 251 62.5
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.2e-22 109.8 254 58.7
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 4.1e-22 109.4 236 63.6
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.2e-21 107.8 236 62.7
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-21 107.8 79 67.1
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.2e-21 107.8 251 59.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 1.6e-21 107.5 244 61.9
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.6e-21 107.5 237 62.9
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.7e-21 106.7 237 62.9
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.7e-21 106.7 82 64.6
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 4.6e-21 105.9 236 61.4
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.0e-20 104.8 253 60.5
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.7e-20 104.0 236 61.4
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 1.7e-20 104.0 73 67.1
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.0e-20 103.2 236 61.4
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.0e-20 103.2 238 62.2
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 3.9e-20 102.8 69 68.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 6.6e-20 102.1 250 58.0
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 8.6e-20 101.7 265 57.0
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.9e-19 100.5 241 61.4
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.9e-19 100.5 80 65.0
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 4.3e-19 99.4 265 56.6
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 4.3e-19 99.4 265 56.6
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 4.3e-19 99.4 242 61.6
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 7.3e-19 98.6 239 59.0
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.6e-18 97.4 382 44.5
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 3.6e-18 96.3 272 55.9
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 7.6e-16 88.6 72 63.9
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 2.2e-15 87.0 69 59.4
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 4.9e-15 85.9 84 58.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 1.9e-14 84.0 68 58.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.4e-14 83.6 69 63.8
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.4e-14 83.6 204 66.7
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 5.4e-14 82.4 247 54.7
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 7.1e-14 82.0 235 58.7
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 3.5e-13 79.7 235 59.1
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 3.9e-12 76.3 62 58.1
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.5e-11 74.3 112 43.8
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.9e-11 73.9 203 64.5
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 3.3e-11 73.2 63 58.7
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.7e-10 69.3 203 66.0
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 4.7e-10 69.3 273 54.2
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 4.7e-10 69.3 34 94.1
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 8.1e-10 68.6 82 50.0
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 4.0e-09 66.2 271 49.4
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 5.2e-09 65.9 106 47.2
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 1.2e-08 64.7 54 51.9
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.9e-06 57.4 45 55.6
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 2.4e-06 57.0 195 58.5
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.1e-06 55.5 36 72.2


User provided reference genes

Program Settings