Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G319.13 Capsicum annuum HOM05D005186 ORTHO05D006278 3.4e-62 241.5 123 100.0
CAN.G48.15 Capsicum annuum HOM05D005186 ORTHO05D006278 1.2e-27 126.7 80 83.8
Nitab4.5_0003875g0030 Nicotiana tabacum HOM05D005186 ORTHO05D006278 1.2e-27 126.7 79 82.3
Solyc03g083970.3 Solanum lycopersicum HOM05D005186 ORTHO05D006278 2.7e-27 125.6 80 82.5
Sopen03g023730 Solanum pennellii HOM05D005186 ORTHO05D006278 2.7e-27 125.6 80 82.5
PGSC0003DMG400013858 Solanum tuberosum HOM05D005186 ORTHO05D006278 2.7e-27 125.6 80 82.5
Nitab4.5_0001383g0010 Nicotiana tabacum HOM05D005186 ORTHO05D006278 3.5e-27 125.2 80 82.5
Peaxi162Scf00241g00318 Petunia axillaris HOM05D005186 ORTHO05D006278 7.9e-27 124.0 75 85.3
HanXRQChr14g0461411 Helianthus annuus HOM05D005186 ORTHO05D006278 3.7e-24 115.2 104 62.5
CiPaw.04G060200 Carya illinoinensis HOM05D005186 ORTHO05D006278 6.3e-24 114.4 74 74.3
Sabra12G0094900 Salix brachista HOM05D005186 ORTHO05D006278 8.2e-24 114.0 77 77.9
Potri.012G126000 Populus trichocarpa HOM05D005186 ORTHO05D006278 1.8e-23 112.8 77 76.6
Sabra15G0140200 Salix brachista HOM05D005186 ORTHO05D006278 2.4e-23 112.5 77 76.6
Oeu022491.2 Olea europaea HOM05D005186 ORTHO05D006278 3.1e-23 112.1 74 77.0
Hma1.2p1_0432F.1_g151690 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 5.3e-23 111.3 80 72.5
Migut.F00469 Erythranthe guttata HOM05D005186 ORTHO05D006278 6.9e-23 110.9 75 76.0
Potri.015G126800 Populus trichocarpa HOM05D005186 ORTHO05D006278 6.9e-23 110.9 77 75.3
Oeu042561.2 Olea europaea HOM05D005186 ORTHO05D006278 3.4e-22 108.6 74 75.7
MSTRG.128 Avicennia marina HOM05D005186 ORTHO05D006278 4.5e-22 108.2 75 70.7
Hma1.2p1_1640F.1_g295100 Hydrangea macrophylla HOM05D005186 ORTHO05D006278 4.5e-22 108.2 74 74.3
RhsimUnG0046700 Rhododendron simsii HOM05D005186 ORTHO05D006278 4.5e-22 108.2 77 72.7
PGR042G0730 Punica granatum HOM05D005186 ORTHO05D006278 7.6e-22 107.5 77 71.4
SGA_v2.0_scaffold2G01194 Striga asiatica HOM05D005186 ORTHO05D006278 1.3e-21 106.7 75 72.0
Cpa.g.sc3.315 Carica papaya HOM05D005186 ORTHO05D006278 1.7e-21 106.3 77 70.1
SalBow2G2587 Salvia bowleyana HOM05D005186 ORTHO05D006278 1.7e-21 106.3 74 71.6
vmacro06793 Vaccinium macrocarpon HOM05D005186 ORTHO05D006278 2.2e-21 105.9 77 72.7
CSS0020740 Camellia sinensis var. sinensis HOM05D005186 ORTHO05D006278 2.9e-21 105.5 74 70.3
Dinv28566 Davidia involucrata HOM05D005186 ORTHO05D006278 2.9e-21 105.5 77 71.4
Migut.F01178 Erythranthe guttata HOM05D005186 ORTHO05D006278 2.9e-21 105.5 74 70.3
Lj3g0017931 Lotus japonicus HOM05D005186 ORTHO05D006278 2.9e-21 105.5 77 70.1
arahy.Tifrunner.gnm1.ann1.7NC073 Arachis hypogaea HOM05D005186 ORTHO05D006278 6.5e-21 104.4 89 62.9
Haze_13870 Corylus avellana HOM05D005186 ORTHO05D006278 6.5e-21 104.4 77 68.8
Nn1g01074 Nelumbo nucifera HOM05D005186 ORTHO05D006278 6.5e-21 104.4 74 68.9
Cc02_g04200 Coffea canephora HOM05D005186 ORTHO05D006278 8.5e-21 104.0 80 63.8
Glyma.09G231200 Glycine max HOM05D005186 ORTHO05D006278 8.5e-21 104.0 77 68.8
Lj8A42G21 Lonicera japonica HOM05D005186 ORTHO05D006278 8.5e-21 104.0 102 57.8
Prupe.2G277700 Prunus persica HOM05D005186 ORTHO05D006278 8.5e-21 104.0 77 68.8
VMungo1127G0816 Vigna mungo HOM05D005186 ORTHO05D006278 8.5e-21 104.0 89 62.9
Actinidia13575 Actinidia chinensis HOM05D005186 ORTHO05D006278 1.1e-20 103.6 66 77.3
Ciclev10005111m.g Citrus clementina HOM05D005186 ORTHO05D006278 1.1e-20 103.6 77 68.8
Lsat_1_v5_gn_2_129120 Lactuca sativa HOM05D005186 ORTHO05D006278 1.1e-20 103.6 104 54.8
arahy.Tifrunner.gnm1.ann1.UNN1LQ Arachis hypogaea HOM05D005186 ORTHO05D006278 1.4e-20 103.2 77 67.5
TAR374G0329 Trochodendron aralioides HOM05D005186 ORTHO05D006278 1.4e-20 103.2 77 70.1
Atru.chr1.716 Acer truncatum HOM05D005186 ORTHO05D006278 1.9e-20 102.8 73 69.9
Duzib205G1009 Durio zibethinus HOM05D005186 ORTHO05D006278 1.9e-20 102.8 77 67.5
Aqoxy7G00728 Aquilegia oxysepala HOM05D005186 ORTHO05D006278 2.5e-20 102.4 77 68.8
Gohir.D03G107500 Gossypium hirsutum HOM05D005186 ORTHO05D006278 2.5e-20 102.4 70 71.4
Gorai.003G113800 Gossypium raimondii HOM05D005186 ORTHO05D006278 2.5e-20 102.4 70 71.4
PGR142G0385 Punica granatum HOM05D005186 ORTHO05D006278 2.5e-20 102.4 82 63.4
QL09p019611 Quercus lobata HOM05D005186 ORTHO05D006278 2.5e-20 102.4 70 72.9
SGA_v2.0_scaffold543G52822 Striga asiatica HOM05D005186 ORTHO05D006278 2.5e-20 102.4 75 66.7
CiPaw.03G094100 Carya illinoinensis HOM05D005186 ORTHO05D006278 3.2e-20 102.1 77 67.5
AUR62015515 Chenopodium quinoa HOM05D005186 ORTHO05D006278 3.2e-20 102.1 74 68.9
Eucgr.A02891 Eucalyptus grandis HOM05D005186 ORTHO05D006278 3.2e-20 102.1 77 67.5
ECA238G0955 Erigeron canadensis HOM05D005186 ORTHO05D006278 4.2e-20 101.7 80 61.2
Phvul.011G006100 Phaseolus vulgaris HOM05D005186 ORTHO05D006278 4.2e-20 101.7 77 67.5
Sc13g0007880 Simmondsia chinensis HOM05D005186 ORTHO05D006278 4.2e-20 101.7 76 69.7
Dinv22950 Davidia involucrata HOM05D005186 ORTHO05D006278 5.5e-20 101.3 76 65.8
Thecc.03G156500 Theobroma cacao HOM05D005186 ORTHO05D006278 5.5e-20 101.3 70 70.0
Glyma.12G005300 Glycine max HOM05D005186 ORTHO05D006278 7.2e-20 100.9 77 67.5
Manes.14G035500 Manihot esculenta HOM05D005186 ORTHO05D006278 7.2e-20 100.9 83 63.9
AUR62002195 Chenopodium quinoa HOM05D005186 ORTHO05D006278 9.3e-20 100.5 74 68.9
Ca_25005_v3 Cicer arietinum L. HOM05D005186 ORTHO05D006278 9.3e-20 100.5 81 64.2
Lalb_Chr01g0000291 Lupinus albus HOM05D005186 ORTHO05D006278 9.3e-20 100.5 77 67.5
FvH4_7g27600 Fragaria vesca HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
FAN03G1399 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
FAN06G2498 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
FAN06G5126 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
FAN10G1701 Fragaria x ananassa HOM05D005186 ORTHO05D006278 1.6e-19 99.8 77 66.2
Lalb_Chr19g0140361 Lupinus albus HOM05D005186 ORTHO05D006278 1.6e-19 99.8 83 62.7
TAR375G0993 Trochodendron aralioides HOM05D005186 ORTHO05D006278 1.6e-19 99.8 70 71.4
Hund11823 Selenicereus undatus HOM05D005186 ORTHO05D006278 2.1e-19 99.4 76 68.4
Ah.07g207900 Amaranthus hybridus HOM05D005186 ORTHO05D006278 2.7e-19 99.0 74 66.2
RcHm_v2.0_Chr1g0374461 Rosa chinensis HOM05D005186 ORTHO05D006278 2.7e-19 99.0 77 66.2
EL10Ac3g05838 Beta vulgaris HOM05D005186 ORTHO05D006278 3.6e-19 98.6 74 71.6
PSO170G0780 Papaver somniferum HOM05D005186 ORTHO05D006278 3.6e-19 98.6 66 74.2
CANSAT56G0052 Cannabis sativa HOM05D005186 ORTHO05D006278 4.6e-19 98.2 76 65.8
DCAR_020192 Daucus carota HOM05D005186 ORTHO05D006278 4.6e-19 98.2 108 53.7
PSO017G1100 Papaver somniferum HOM05D005186 ORTHO05D006278 4.6e-19 98.2 66 74.2
COL.COLO4_14129 Corchorus olitorius HOM05D005186 ORTHO05D006278 7.9e-19 97.4 77 63.6
Nn6g34030 Nelumbo nucifera HOM05D005186 ORTHO05D006278 1.4e-18 96.7 77 64.9
TPR.G3671 Trifolium pratense HOM05D005186 ORTHO05D006278 1.8e-18 96.3 77 64.9
TWI23G1038 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 2.3e-18 95.9 77 66.2
Psat7g207000 Pisum sativum HOM05D005186 ORTHO05D006278 3.0e-18 95.5 70 67.1
Manes.06G135200 Manihot esculenta HOM05D005186 ORTHO05D006278 3.9e-18 95.1 83 62.7
MELO3C018660.2 Cucumis melo HOM05D005186 ORTHO05D006278 5.1e-18 94.7 77 61.0
THA.LOC104821410 Tarenaya hassleriana HOM05D005186 ORTHO05D006278 5.1e-18 94.7 77 64.9
GSVIVG01018630001 Vitis vinifera HOM05D005186 ORTHO05D006278 5.1e-18 94.7 76 68.4
Gohir.A03G058600 Gossypium hirsutum HOM05D005186 ORTHO05D006278 6.7e-18 94.4 77 63.6
Sed0012571 Sechium edule HOM05D005186 ORTHO05D006278 6.7e-18 94.4 77 61.0
CsaV3_7G006320 Cucumis sativus L. HOM05D005186 ORTHO05D006278 8.8e-18 94.0 70 62.9
ClCG09G015150 Citrullus lanatus HOM05D005186 ORTHO05D006278 1.1e-17 93.6 77 61.0
Medtr4g036110 Medicago truncatula HOM05D005186 ORTHO05D006278 1.1e-17 93.6 77 64.9
unitig_1.g29355 Utricularia gibba HOM05D005186 ORTHO05D006278 1.5e-17 93.2 76 65.8
unitig_747.g22057 Utricularia gibba HOM05D005186 ORTHO05D006278 1.5e-17 93.2 76 65.8
Thecc.01G380900 Theobroma cacao HOM05D005186 ORTHO05D006278 1.9e-17 92.8 72 65.3
COL.COLO4_07114 Corchorus olitorius HOM05D005186 ORTHO05D006278 2.5e-17 92.4 77 61.0
Thhalv10004201m.g Eutrema salsugineum HOM05D005186 ORTHO05D006278 4.3e-17 91.7 70 67.1
TWI39G1272 Tripterygium wilfordii HOM05D005186 ORTHO05D006278 4.3e-17 91.7 77 64.9
HPP92_022436 Vanilla planifolia HOM05D005186 ORTHO05D006278 4.3e-17 91.7 75 61.3
COL.COLO4_12507 Corchorus olitorius HOM05D005186 ORTHO05D006278 5.7e-17 91.3 73 63.0
MBI04_g37589_MAGBIO Magnolia biondii HOM05D005186 ORTHO05D006278 5.7e-17 91.3 73 63.0
Sed0005126 Sechium edule HOM05D005186 ORTHO05D006278 5.7e-17 91.3 83 57.8
HanXRQChr05g0146091 Helianthus annuus HOM05D005186 ORTHO05D006278 9.7e-17 90.5 88 59.1
Aa31LG11G1230 Aethionema arabicum HOM05D005186 ORTHO05D006278 2.2e-16 89.4 70 65.7
CDE02G0091 Ceratophyllum demersum HOM05D005186 ORTHO05D006278 2.8e-16 89.0 66 62.1
Os02g0105500 Oryza sativa ssp. japonica HOM05D005186 ORTHO05D006278 3.7e-16 88.6 66 63.6
Zm00001eb379410 Zea mays HOM05D005186 ORTHO05D006278 3.7e-16 88.6 66 66.7
Sp2g25560 Schrenkiella parvula HOM05D005186 ORTHO05D006278 4.8e-16 88.2 70 64.3
Zm00001eb229450 Zea mays HOM05D005186 ORTHO05D006278 4.8e-16 88.2 66 65.2
A01p12890 Brassica napus HOM05D005186 ORTHO05D006278 1.1e-15 87.0 70 64.3
C01p15530 Brassica napus HOM05D005186 ORTHO05D006278 1.1e-15 87.0 70 64.3
BolC1t01505H Brassica oleracea HOM05D005186 ORTHO05D006278 1.1e-15 87.0 70 64.3
BraA01t01233Z Brassica rapa HOM05D005186 ORTHO05D006278 1.1e-15 87.0 70 64.3
BcaNung02779 Brassica carinata HOM05D005186 ORTHO05D006278 1.4e-15 86.7 70 64.3
Carub.0008s2307 Capsella rubella HOM05D005186 ORTHO05D006278 1.8e-15 86.3 70 61.4
AL8G39220 Arabidopsis lyrata HOM05D005186 ORTHO05D006278 2.4e-15 85.9 70 62.9
CAN.G1067.7 Capsicum annuum HOM05D005186 ORTHO05D006278 3.1e-15 85.5 72 63.9
BcaC01g02463 Brassica carinata HOM05D005186 ORTHO05D006278 4.1e-15 85.1 70 62.9
C03p64500 Brassica napus HOM05D005186 ORTHO05D006278 4.1e-15 85.1 70 62.9
BolC3t18705H Brassica oleracea HOM05D005186 ORTHO05D006278 5.3e-15 84.7 70 62.9
AT5G62390 Arabidopsis thaliana HOM05D005186 ORTHO05D006278 6.9e-15 84.3 70 61.4
Os06g0104400 Oryza sativa ssp. japonica HOM05D005186 ORTHO05D006278 6.9e-15 84.3 66 60.6
CARHR276170 Cardamine hirsuta HOM05D005186 ORTHO05D006278 9.1e-15 84.0 70 62.9
Hund04601 Selenicereus undatus HOM05D005186 ORTHO05D006278 5.9e-14 81.3 76 56.6
GSVIVG01000691001 Vitis vinifera HOM05D005186 ORTHO05D006278 2.2e-13 79.3 64 64.1
GSVIVG01000692001 Vitis vinifera HOM05D005186 ORTHO05D006278 1.9e-12 76.3 64 62.5
BcaC01g02462 Brassica carinata HOM05D005186 ORTHO05D006278 5.5e-12 74.7 60 65.0
ATR1153G063 Amborella trichopoda HOM05D005186 ORTHO05D006278 1.2e-11 73.6 63 57.1
SHI13968 Sapria himalayana HOM05D005186 ORTHO05D006278 1.4e-10 70.1 71 47.9
RcHm_v2.0_Chr1g0335331 Rosa chinensis HOM05D005186 ORTHO05D006278 9.7e-09 63.9 47 70.2
SEGI_24397 Sequoiadendron giganteum HOM05D005186 ORTHO05D006278 3.4e-06 55.5 64 42.2
Atru.chr5.265 Acer truncatum HOM05D005186 ORTHO05D006278 4.5e-06 55.1 43 55.8


User provided reference genes

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