Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 3.9e-188 661.4 352 100.0
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 6.5e-175 617.5 351 94.0
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 6.5e-175 617.5 351 94.3
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 4.2e-174 614.8 351 93.7
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 7.4e-171 604.0 351 91.2
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 1.8e-169 599.4 351 90.3
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 3.6e-165 585.1 351 89.2
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 4.1e-153 545.0 351 80.1
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 5.6e-150 534.6 351 78.3
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 9.5e-150 533.9 352 80.1
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 4.4e-147 525.0 351 77.8
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 2.9e-146 522.3 348 78.7
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.7e-146 521.9 351 77.8
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 6.4e-146 521.2 351 77.5
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 8.3e-146 520.8 352 78.4
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.0e-143 513.8 333 79.3
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.0e-143 513.8 332 81.6
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 1.9e-142 509.6 348 77.6
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 9.5e-142 507.3 346 77.2
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 3.6e-141 505.4 348 75.3
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 6.2e-141 504.6 351 74.9
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 1.4e-140 503.4 351 74.9
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.4e-140 503.4 347 76.1
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.8e-140 503.1 349 77.4
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.8e-140 503.1 355 75.5
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 3.1e-140 502.3 337 77.4
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 5.2e-140 501.5 343 76.1
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 5.2e-140 501.5 348 75.3
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 1.2e-139 500.4 346 77.2
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.5e-139 500.0 338 77.8
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 9.8e-139 497.3 357 74.8
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 1.7e-138 496.5 356 75.3
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 2.9e-138 495.7 332 77.4
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 3.7e-138 495.4 358 74.6
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 3.7e-138 495.4 351 74.9
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 3.7e-138 495.4 353 76.2
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 6.4e-138 494.6 369 73.7
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 6.4e-138 494.6 337 76.3
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 1.1e-137 493.8 333 77.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 1.1e-137 493.8 356 75.0
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 1.4e-137 493.4 333 77.2
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 1.9e-137 493.0 337 76.0
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 3.2e-137 492.3 333 77.2
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 3.2e-137 492.3 339 76.7
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 3.2e-137 492.3 339 76.7
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 2.0e-136 489.6 346 75.7
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 1.3e-135 486.9 349 74.8
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.3e-135 486.1 351 73.8
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 1.1e-134 483.8 339 75.8
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.9e-134 483.0 349 73.1
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.9e-134 483.0 334 76.6
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.3e-134 481.9 385 68.6
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.6e-134 481.5 336 75.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 5.6e-134 481.5 331 75.8
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 7.3e-134 481.1 354 72.6
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 9.5e-134 480.7 349 73.4
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 9.5e-134 480.7 349 72.8
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.2e-133 480.3 351 72.9
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.6e-133 479.9 335 75.5
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.6e-133 479.9 346 74.0
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 2.8e-133 479.2 343 73.5
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 3.6e-133 478.8 361 70.6
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 4.7e-133 478.4 385 68.1
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 6.2e-133 478.0 335 75.8
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.4e-132 476.9 345 73.0
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.4e-132 476.9 335 75.5
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 8.9e-132 474.2 338 73.1
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 1.2e-131 473.8 342 73.1
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 2.0e-131 473.0 342 73.1
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 9.8e-131 470.7 332 75.3
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 9.8e-131 470.7 335 75.2
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 5.4e-129 464.9 346 69.4
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 2.7e-128 462.6 335 72.5
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 2.3e-127 459.5 338 71.0
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 2.3e-127 459.5 338 71.9
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 3.0e-127 459.1 338 71.0
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 3.0e-127 459.1 338 71.0
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 3.0e-127 459.1 338 71.0
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 1.5e-126 456.8 339 71.1
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 2.5e-126 456.1 339 72.6
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 5.6e-126 454.9 352 68.2
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 2.1e-125 453.0 334 71.3
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 2.8e-125 452.6 333 72.4
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 6.2e-125 451.4 334 71.9
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 4.0e-124 448.7 338 73.7
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 2.9e-122 442.6 299 76.9
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.4e-121 440.3 330 67.9
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 7.3e-118 427.9 270 81.1
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 8.1e-117 424.5 270 80.0
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.2e-107 394.0 335 59.4
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 2.9e-106 389.4 356 60.1
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 5.4e-105 385.2 332 58.4
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.3e-103 380.6 336 59.8
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.3e-101 374.0 273 73.3
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 3.5e-96 355.9 261 73.2
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 6.1e-80 302.0 285 61.8
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 1.2e-75 287.7 242 62.0
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.4e-73 280.8 273 57.1
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.2e-73 279.6 351 46.7
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.3e-70 269.6 229 65.9
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 1.7e-69 267.3 332 49.4
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 2.2e-66 256.9 311 48.6
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.9e-63 246.1 151 81.5
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.1e-62 244.6 182 69.8
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 1.1e-60 238.0 332 44.0
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.8e-60 237.3 193 65.8
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 7.0e-60 235.3 332 47.0
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.0e-56 221.9 186 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 1.9e-49 200.7 167 59.3
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 8.0e-48 195.3 140 73.6
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 6.5e-42 175.6 139 64.0
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 1.2e-40 171.4 265 40.4
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 4.0e-39 166.4 114 75.4
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.4e-38 162.9 91 89.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 4.6e-27 126.3 131 51.1
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.9e-26 123.2 133 59.4
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 9.5e-25 118.6 66 87.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.2e-21 107.5 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.1e-15 88.6 89 52.8
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 2.9e-13 80.5 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 8.3e-13 79.0 46 82.6


User provided reference genes

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