Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G313.12 Capsicum annuum HOM05D000092 ORTHO05D000042 1.4e-41 172.6 88 100.0
PGSC0003DMG400016823 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.4e-22 109.4 87 66.7
CAN.G1161.13 Capsicum annuum HOM05D000092 ORTHO05D000042 7.9e-21 103.6 87 59.8
CAN.G1161.16 Capsicum annuum HOM05D000092 ORTHO05D000042 2.3e-20 102.1 87 59.8
CAN.G960.2 Capsicum annuum HOM05D000092 ORTHO05D000042 8.7e-20 100.1 86 55.8
PGSC0003DMG401007575 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.7e-19 97.4 87 56.3
Peaxi162Scf00739g00123 Petunia axillaris HOM05D000092 ORTHO05D000042 2.2e-18 95.5 87 58.6
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 2.2e-18 95.5 87 52.9
PGSC0003DMG401016933 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.8e-18 95.1 87 55.2
CAN.G1161.9 Capsicum annuum HOM05D000092 ORTHO05D000042 4.8e-18 94.4 87 52.9
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 6.3e-18 94.0 87 50.6
PGSC0003DMG400018903 Solanum tuberosum HOM05D000092 ORTHO05D000042 8.2e-18 93.6 87 54.0
CAN.G1161.48 Capsicum annuum HOM05D000092 ORTHO05D000042 1.4e-17 92.8 87 50.6
Peaxi162Scf00003g00479 Petunia axillaris HOM05D000092 ORTHO05D000042 1.4e-17 92.8 87 57.5
Solyc04g005550.2 Solanum lycopersicum HOM05D000092 ORTHO05D000042 4.1e-17 91.3 85 52.9
CAN.G1161.51 Capsicum annuum HOM05D000092 ORTHO05D000042 6.9e-17 90.5 86 50.0
PGSC0003DMG401011427 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.9e-17 90.5 87 51.7
PGSC0003DMG401017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.9e-17 90.5 85 51.8
PGSC0003DMG402017416 Solanum tuberosum HOM05D000092 ORTHO05D000042 6.9e-17 90.5 85 51.8
PGSC0003DMG400013165 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.0e-17 90.1 66 66.7
CAN.G641.10 Capsicum annuum HOM05D000092 ORTHO05D000042 1.2e-16 89.7 86 53.5
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 1.2e-16 89.7 85 55.3
PGSC0003DMG400002820 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.7e-16 87.0 87 48.3
PGSC0003DMG400021948 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.9e-15 85.1 87 49.4
CAN.G641.2 Capsicum annuum HOM05D000092 ORTHO05D000042 5.0e-15 84.3 87 50.6
Solyc12g044200.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 8.5e-15 83.6 79 54.4
Solyc12g016220.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.4e-14 82.8 76 52.6
PGSC0003DMG401003025 Solanum tuberosum HOM05D000092 ORTHO05D000042 1.4e-14 82.8 86 48.8
Peaxi162Scf00003g04724 Petunia axillaris HOM05D000092 ORTHO05D000042 1.9e-14 82.4 87 48.3
Solyc12g044180.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.5e-14 82.0 87 48.3
Peaxi162Scf00000g00843 Petunia axillaris HOM05D000092 ORTHO05D001673 3.2e-14 81.6 74 56.8
Sopen01g028960 Solanum pennellii HOM05D000092 ORTHO05D000042 5.5e-14 80.9 71 54.9
Sopen02g011670 Solanum pennellii HOM05D000092 ORTHO05D000042 1.6e-13 79.3 87 46.0
Solyc10g054970.1 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.6e-13 78.2 87 44.8
Peaxi162Scf00007g00431 Petunia axillaris HOM05D000092 ORTHO05D000042 1.8e-12 75.9 87 46.0
Peaxi162Scf00253g00315 Petunia axillaris HOM05D000092 ORTHO05D000042 1.8e-12 75.9 80 52.5
Solyc10g054990.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.8e-12 75.9 87 42.5
Sopen10g024900 Solanum pennellii HOM05D000092 ORTHO05D000042 3.9e-12 74.7 69 50.7
Peaxi162Scf00003g04738 Petunia axillaris HOM05D000092 ORTHO05D000042 6.7e-12 73.9 91 46.2
Solyc02g036270.4 Solanum lycopersicum HOM05D000092 ORTHO05D000042 6.7e-12 73.9 79 46.8
CAN.G960.37 Capsicum annuum HOM05D000092 ORTHO05D000042 4.3e-11 71.2 86 46.5
CAN.G960.21 Capsicum annuum HOM05D000092 ORTHO05D000042 5.7e-11 70.9 86 43.0
PGSC0003DMG401008349 Solanum tuberosum HOM05D000092 ORTHO05D000042 7.4e-11 70.5 83 42.2
CAN.G1161.58 Capsicum annuum HOM05D000092 ORTHO05D000042 2.8e-10 68.6 69 49.3
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 2.8e-10 68.6 87 37.9
Sed0000144 Sechium edule HOM05D000092 ORTHO05D000042 1.4e-09 66.2 82 36.6
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-09 65.9 87 36.8
Peaxi162Scf00406g00111 Petunia axillaris HOM05D000092 ORTHO05D000042 1.8e-09 65.9 86 39.5
PGSC0003DMG400021477 Solanum tuberosum HOM05D000092 ORTHO05D000042 9.1e-09 63.5 69 44.9
ClCG02G016170 Citrullus lanatus HOM05D000092 ORTHO05D000042 1.2e-08 63.2 86 37.2
Dinv20774 Davidia involucrata HOM05D000092 ORTHO05D000042 1.2e-08 63.2 87 36.8
Sopen10g029660 Solanum pennellii HOM05D000092 ORTHO05D000042 1.5e-08 62.8 87 39.1
TAR636G3578 Trochodendron aralioides HOM05D000092 ORTHO05D000042 1.5e-08 62.8 82 37.8
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-08 62.0 87 34.5
Dinv25017 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-08 62.0 69 42.0
Lj6C205T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.6e-08 62.0 87 34.5
PGSC0003DMG401010885 Solanum tuberosum HOM05D000092 ORTHO05D000042 3.4e-08 61.6 86 39.5
Lj6C195G1 Lonicera japonica HOM05D000092 ORTHO05D000042 4.5e-08 61.2 87 35.6
Sopen04g001570 Solanum pennellii HOM05D000092 ORTHO05D000042 4.5e-08 61.2 51 56.9
Dinv02871 Davidia involucrata HOM05D000092 ORTHO05D000042 5.9e-08 60.8 87 35.6
Lj5C773G9 Lonicera japonica HOM05D000092 ORTHO05D000042 1.0e-07 60.1 70 40.0
Lj5C777T3 Lonicera japonica HOM05D000092 ORTHO05D000042 1.0e-07 60.1 74 36.5
Lj6C191T2 Lonicera japonica HOM05D000092 ORTHO05D000042 1.0e-07 60.1 87 34.5
vmacro04667 Vaccinium macrocarpon HOM05D001657 ORTHO05D001557 1.0e-07 60.1 81 34.6
Lj4C322T3 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-07 59.7 75 34.7
Lj4C322T4 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-07 59.7 75 34.7
TAR636G0757 Trochodendron aralioides HOM05D000092 ORTHO05D000042 1.7e-07 59.3 77 39.0
Lj5C807T3 Lonicera japonica HOM05D000092 ORTHO05D000042 2.9e-07 58.5 70 37.1
PGSC0003DMG400010886 Solanum tuberosum HOM05D000092 ORTHO05D000042 2.9e-07 58.5 86 37.2
MD11G1090100 Malus domestica HOM05D000092 ORTHO05D000042 3.8e-07 58.2 76 35.5
Prupe.7G035600 Prunus persica HOM05D000092 ORTHO05D000042 3.8e-07 58.2 76 35.5
Sopen10g024930 Solanum pennellii HOM05D000092 ORTHO05D000042 3.8e-07 58.2 56 50.0
Sopen12g008030 Solanum pennellii HOM05D000092 ORTHO05D000042 5.0e-07 57.8 52 51.9
Nitab4.5_0000358g0090 Nicotiana tabacum HOM05D000092 ORTHO05D000042 6.5e-07 57.4 99 36.4
ClCG02G016220 Citrullus lanatus HOM05D000092 ORTHO05D000042 8.5e-07 57.0 82 31.7
MELO3C004321.2 Cucumis melo HOM05D000092 ORTHO05D000042 8.5e-07 57.0 86 33.7
Dinv18667 Davidia involucrata HOM05D000092 ORTHO05D011915 8.5e-07 57.0 81 32.1
Lj4A323T38 Lonicera japonica HOM05D000092 ORTHO05D000042 8.5e-07 57.0 75 36.0
Lj4C326T2 Lonicera japonica HOM05D000092 ORTHO05D000042 8.5e-07 57.0 75 36.0
Lj6C201T1 Lonicera japonica HOM05D000092 ORTHO05D000042 8.5e-07 57.0 87 33.3
Medtr2g071850 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-06 56.6 86 29.1
Medtr2g071960 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-06 56.6 86 29.1
Rhsim10G0061900 Rhododendron simsii HOM05D000467 ORTHO05D000042 1.1e-06 56.6 73 38.4
Lj6P229T19 Lonicera japonica HOM05D000092 ORTHO05D016306 1.4e-06 56.2 75 34.7
Prupe.7G035000 Prunus persica HOM05D000092 ORTHO05D000042 1.4e-06 56.2 76 34.2
MELO3C031324.2 Cucumis melo HOM05D000092 ORTHO05D000042 2.5e-06 55.5 86 33.7
Dinv16343 Davidia involucrata HOM05D000092 ORTHO05D000042 2.5e-06 55.5 69 37.7
TAR636G0203 Trochodendron aralioides HOM05D000092 ORTHO05D000042 2.5e-06 55.5 68 35.3
CsaV3_2G010470 Cucumis sativus L. HOM05D000092 ORTHO05D000042 3.2e-06 55.1 87 31.0
Dinv25011 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-06 55.1 69 36.2
Lj1C1089T10 Lonicera japonica HOM05D000092 ORTHO05D000042 3.2e-06 55.1 81 33.3
Medtr2g072030 Medicago truncatula HOM05D000092 ORTHO05D000042 3.2e-06 55.1 86 26.7
Prupe.3G016700 Prunus persica HOM05D000092 ORTHO05D000042 3.2e-06 55.1 86 27.9
Prupe.7G037500 Prunus persica HOM05D000092 ORTHO05D000042 3.2e-06 55.1 76 31.6
QL03p003333 Quercus lobata HOM05D000092 ORTHO05D000042 3.2e-06 55.1 77 33.8
Solyc10g055080.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 3.2e-06 55.1 50 54.0
CSS0042836 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.2e-06 54.7 81 32.1
GSVIVG01021955001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.2e-06 54.7 84 28.6
CiPaw.16G058500 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.5e-06 54.3 87 31.0
CsaV3_2G033580 Cucumis sativus L. HOM05D000092 ORTHO05D000042 5.5e-06 54.3 86 32.6
Sopen04g018240 Solanum pennellii HOM05D000092 ORTHO05D000042 5.5e-06 54.3 46 56.5
PGSC0003DMG400010954 Solanum tuberosum HOM05D000092 ORTHO05D000042 5.5e-06 54.3 52 50.0
CSS0004067 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 7.2e-06 53.9 80 32.5
CiPaw.14G091300 Carya illinoinensis HOM05D000092 ORTHO05D000042 7.2e-06 53.9 82 30.5
FAN20G0799 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.2e-06 53.9 82 31.7
Sed0005596 Sechium edule HOM05D000092 ORTHO05D000042 7.2e-06 53.9 77 35.1
Dinv40446 Davidia involucrata HOM05D000092 ORTHO05D000042 9.4e-06 53.5 84 33.3
Lju124A45G66 Lonicera japonica HOM05D000092 ORTHO05D000042 9.4e-06 53.5 75 34.7


User provided reference genes

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