Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G312.7 Capsicum annuum HOM05D008056 ORTHO05D009804 1.5e-36 155.6 77 100.0
Solyc06g052020.2 Solanum lycopersicum HOM05D008056 ORTHO05D009804 7.6e-28 126.7 78 84.6
PGSC0003DMG400019598 Solanum tuberosum HOM05D008056 ORTHO05D009804 1.0e-27 126.3 80 83.8
Sopen06g018070 Solanum pennellii HOM05D008056 ORTHO05D009804 4.9e-27 124.0 78 83.3
Nitab4.5_0000548g0010 Nicotiana tabacum HOM05D008056 ORTHO05D009804 1.3e-14 82.8 81 58.0
Solyc03g082945.1 Solanum lycopersicum HOM05D008056 ORTHO05D009804 4.1e-13 77.8 82 54.9
Sopen03g022760 Solanum pennellii HOM05D008056 ORTHO05D009804 4.1e-13 77.8 82 54.9
Nitab4.5_0005491g0040 Nicotiana tabacum HOM05D008056 ORTHO05D009804 1.2e-12 76.3 92 53.3
PGSC0003DMG400018526 Solanum tuberosum HOM05D008056 ORTHO05D009804 2.6e-12 75.1 82 54.9
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 7.7e-12 73.6 82 53.7
Peaxi162Scf00740g00228 Petunia axillaris HOM05D008056 ORTHO05D009804 2.2e-11 72.0 71 54.9
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 6.5e-11 70.5 75 54.7
Oeu060999.1 Olea europaea HOM05D008056 ORTHO05D009804 4.2e-10 67.8 70 54.3
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 5.5e-10 67.4 82 50.0
ECA232G3962 Erigeron canadensis HOM05D008056 ORTHO05D009804 5.5e-10 67.4 62 56.5
Lsat_1_v5_gn_9_49881 Lactuca sativa HOM05D008056 ORTHO05D009804 4.6e-09 64.3 68 50.0
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 1.4e-08 62.8 78 50.0
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 1.4e-08 62.8 77 48.1
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 2.3e-08 62.0 76 51.3
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 5.1e-08 60.8 75 46.7
Cpa.g.sc3.104 Carica papaya HOM05D008056 ORTHO05D009804 5.1e-08 60.8 81 48.1
Cc02_g01320 Coffea canephora HOM05D008056 ORTHO05D009804 6.7e-08 60.5 72 51.4
SalBow2G0413 Salvia bowleyana HOM05D008056 ORTHO05D009804 8.8e-08 60.1 83 43.4
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 8.8e-08 60.1 80 45.0
QL09p007938 Quercus lobata HOM05D008056 ORTHO05D009804 1.1e-07 59.7 72 48.6
TAR629G0325 Trochodendron aralioides HOM05D008056 ORTHO05D009804 1.1e-07 59.7 82 53.7
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 2.0e-07 58.9 81 45.7
Migut.F01018 Erythranthe guttata HOM05D008056 ORTHO05D009804 2.0e-07 58.9 80 43.8
Oeu041070.2 Olea europaea HOM05D008056 ORTHO05D009804 2.6e-07 58.5 93 39.8
DCAR_010591 Daucus carota HOM05D008056 ORTHO05D009804 4.4e-07 57.8 54 51.9
HanXRQChr09g0237881 Helianthus annuus HOM05D008056 ORTHO05D009804 1.7e-06 55.8 61 55.7
Ciclev10023143m.g Citrus clementina HOM05D008056 ORTHO05D009804 2.2e-06 55.5 67 50.7
HanXRQChr15g0485651 Helianthus annuus HOM05D008056 ORTHO05D009804 4.8e-06 54.3 68 44.1
Atru.chr12.2248 Acer truncatum HOM05D008056 ORTHO05D009804 6.3e-06 53.9 82 42.7
Migut.F00196 Erythranthe guttata HOM05D008056 ORTHO05D009804 6.3e-06 53.9 66 48.5
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 6.3e-06 53.9 66 50.0


User provided reference genes

Program Settings