Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 8.1e-186 653.7 348 100.0
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 1.7e-119 433.3 348 69.8
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 4.7e-117 425.2 350 70.0
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.4e-116 423.7 350 69.7
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.3e-108 396.4 346 66.8
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 5.3e-68 262.3 356 49.2
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-65 254.6 353 48.7
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 2.1e-64 250.4 345 46.7
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 1.3e-61 241.1 241 60.6
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.2e-59 234.6 354 46.3
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 4.2e-57 226.1 352 45.7
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 5.5e-57 225.7 346 45.4
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 3.9e-55 219.5 347 45.0
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 3.9e-55 219.5 427 38.2
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 1.5e-54 217.6 349 43.3
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 9.6e-54 214.9 347 43.5
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 1.6e-53 214.2 346 41.0
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.4e-52 211.1 348 46.0
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 2.4e-52 210.3 351 41.9
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 9.0e-52 208.4 355 41.1
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.2e-51 208.0 347 43.2
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.5e-51 207.6 335 43.3
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 1.5e-51 207.6 350 42.6
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 3.4e-51 206.5 261 51.7
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 3.4e-51 206.5 351 42.2
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 3.4e-51 206.5 352 44.6
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 4.5e-51 206.1 352 41.2
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 4.5e-51 206.1 328 41.5
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 7.6e-51 205.3 306 45.4
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 1.3e-50 204.5 350 41.7
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.3e-50 204.5 295 45.1
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 2.2e-50 203.8 300 44.7
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 2.9e-50 203.4 295 45.1
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 4.9e-50 202.6 349 40.4
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 4.9e-50 202.6 351 42.2
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 6.5e-50 202.2 295 44.7
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 4.2e-49 199.5 260 51.2
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 7.1e-49 198.7 352 39.2
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 9.3e-49 198.4 289 42.6
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 9.3e-49 198.4 303 42.9
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 1.2e-48 198.0 305 43.0
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 7.9e-48 195.3 362 40.9
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 1.8e-47 194.1 350 41.4
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 3.0e-47 193.4 355 40.8
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 3.9e-47 193.0 364 38.5
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 5.1e-47 192.6 258 48.1
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 5.1e-47 192.6 289 43.9
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 6.7e-47 192.2 364 38.5
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 8.7e-47 191.8 363 39.7
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.1e-46 191.4 358 40.5
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 2.5e-46 190.3 352 40.3
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 2.5e-46 190.3 342 39.2
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 1.6e-45 187.6 332 39.8
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.6e-45 187.6 266 45.5
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 3.7e-45 186.4 355 39.2
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 4.8e-45 186.0 295 42.0
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 6.3e-45 185.7 310 40.6
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 1.4e-44 184.5 274 44.5
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 1.8e-44 184.1 284 43.7
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 1.2e-43 181.4 271 43.2
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.5e-43 181.0 324 38.0
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 5.9e-43 179.1 258 44.2
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 7.6e-43 178.7 260 43.8
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.3e-42 177.9 410 36.6
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.7e-42 177.6 354 37.3
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 2.2e-42 177.2 362 37.0
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 2.2e-42 177.2 363 39.7
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 2.9e-42 176.8 350 37.7
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 8.5e-42 175.3 350 38.6
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 8.5e-42 175.3 336 39.0
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 8.5e-42 175.3 362 37.0
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 1.9e-41 174.1 338 37.3
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.9e-41 174.1 242 45.5
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 4.2e-41 172.9 373 37.0
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 4.2e-41 172.9 285 43.9
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 7.2e-41 172.2 335 40.6
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 9.3e-41 171.8 298 40.6
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 4.6e-40 169.5 298 41.3
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 1.0e-39 168.3 343 35.9
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.0e-39 168.3 307 37.8
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.0e-39 168.3 298 42.6
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.0e-39 168.3 299 40.5
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 1.3e-39 167.9 302 39.7
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.3e-39 167.2 351 36.5
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 3.0e-39 166.8 386 38.3
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 5.1e-39 166.0 278 40.6
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.5e-38 164.5 331 37.5
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.5e-38 164.5 357 37.8
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.5e-38 164.5 326 36.8
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 7.4e-38 162.2 361 36.0
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 3.7e-37 159.8 361 37.1
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 9.0e-36 155.2 327 36.4
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 2.6e-35 153.7 373 36.7
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 5.9e-35 152.5 249 41.4
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 6.5e-34 149.1 289 37.4
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 8.8e-31 138.7 257 38.1
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 5.7e-30 136.0 225 40.4
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.2e-29 134.0 334 34.7
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 4.5e-27 126.3 363 31.7
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 4.1e-20 103.2 73 75.3
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 1.7e-18 97.8 259 31.7
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 2.9e-18 97.1 64 73.4
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 9.4e-17 92.0 298 29.2
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.2e-16 91.7 147 40.8
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 6.7e-15 85.9 278 28.1
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 8.8e-15 85.5 138 46.4
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.9e-11 72.8 164 34.8
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 7.7e-11 72.4 177 32.8
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 6.1e-08 62.8 98 37.8
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 4.0e-07 60.1 199 31.7
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 6.8e-07 59.3 112 38.4
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.2e-06 58.5 120 38.3
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.6e-06 57.4 46 56.5


User provided reference genes

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