Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.3e-71 273.1 154 100.0
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 8.0e-61 237.3 160 88.1
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.8e-60 236.1 160 87.5
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 4.1e-57 224.9 155 85.2
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 9.2e-57 223.8 193 63.7
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.2e-53 213.4 159 79.2
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.1e-53 212.6 160 78.1
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 6.8e-52 207.6 161 76.4
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 2.6e-51 205.7 166 73.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 4.4e-51 204.9 158 77.2
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 5.8e-51 204.5 156 78.8
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 7.5e-51 204.1 160 73.8
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.5e-51 204.1 157 75.8
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 9.8e-51 203.8 157 79.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.3e-50 203.4 160 76.2
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.3e-50 203.4 156 78.2
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 1.7e-50 203.0 161 75.8
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 8.3e-50 200.7 158 75.3
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.4e-49 199.9 156 78.2
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.4e-49 199.9 160 75.0
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 1.4e-49 199.9 160 74.4
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.9e-49 199.5 159 74.2
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.9e-49 199.5 159 76.1
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.4e-49 199.1 157 73.9
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 2.4e-49 199.1 161 74.5
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.4e-49 199.1 157 74.5
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.2e-49 198.7 157 73.9
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.1e-49 198.4 157 74.5
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.4e-49 198.0 157 73.9
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 7.0e-49 197.6 151 79.5
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.2e-48 196.8 165 70.9
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 2.7e-48 195.7 152 78.9
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 3.5e-48 195.3 162 74.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 4.6e-48 194.9 157 73.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.3e-47 193.4 153 78.4
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.3e-47 192.6 158 72.8
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 3.0e-47 192.2 159 71.7
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 3.0e-47 192.2 153 77.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 3.9e-47 191.8 161 73.9
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 5.0e-47 191.4 158 72.8
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 6.6e-47 191.0 158 72.2
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 8.6e-47 190.7 160 74.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.5e-46 189.9 161 72.0
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.9e-46 189.5 154 74.0
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.9e-46 189.5 150 74.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 2.5e-46 189.1 157 76.4
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 4.3e-46 188.3 154 76.0
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 7.3e-46 187.6 166 72.3
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 7.3e-46 187.6 154 74.0
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 9.5e-46 187.2 153 74.5
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-45 186.4 168 68.5
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 2.1e-45 186.0 154 74.7
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 3.6e-45 185.3 146 73.3
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 6.2e-45 184.5 158 72.2
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 8.1e-45 184.1 155 74.2
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 8.1e-45 184.1 148 75.7
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.1e-44 183.7 150 73.3
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.8e-44 183.0 157 72.0
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.8e-44 183.0 149 75.8
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.3e-44 182.6 151 74.8
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.3e-44 182.6 157 72.6
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 2.3e-44 182.6 152 73.7
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 3.1e-44 182.2 148 74.3
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 8.9e-44 180.6 151 72.8
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 8.9e-44 180.6 145 77.9
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.2e-43 180.3 160 69.4
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.4e-43 178.7 160 70.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.4e-43 178.7 196 60.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 4.4e-43 178.3 161 71.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.5e-43 177.6 154 72.7
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.9e-42 175.6 151 72.2
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.9e-42 175.6 196 63.3
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 2.9e-42 175.6 150 72.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.7e-42 175.3 145 77.2
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.1e-41 173.7 161 68.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.1e-41 173.7 150 72.7
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 2.4e-41 172.6 151 71.5
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 7.1e-41 171.0 151 70.9
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 7.1e-41 171.0 118 84.7
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.1e-40 169.5 154 61.7
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.7e-39 166.4 138 76.8
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.3e-39 166.0 138 76.8
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 2.3e-39 166.0 163 67.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 3.9e-39 165.2 138 76.8
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 3.9e-39 165.2 138 76.8
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.1e-38 163.7 153 67.3
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.5e-38 162.5 143 74.8
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.3e-38 162.2 118 79.7
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.2e-37 157.9 123 72.4
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.2e-35 153.7 150 60.7
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 7.6e-35 151.0 115 73.9
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 9.9e-35 150.6 119 75.6
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.3e-34 150.2 185 48.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 7.1e-33 144.4 151 66.9
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.0e-31 140.6 115 70.4
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.5e-30 136.0 173 48.6
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.6e-29 132.1 124 60.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.0e-28 128.6 104 60.6
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 6.8e-28 127.9 138 53.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 1.2e-27 127.1 138 58.7
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 2.0e-27 126.3 106 65.1
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 3.9e-23 112.1 98 61.2
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 5.8e-19 98.2 144 45.8
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.1e-17 94.0 97 54.6
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 4.2e-17 92.0 86 57.0
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 6.2e-13 78.2 55 65.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.4e-12 77.0 60 61.7
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 6.4e-10 68.2 96 40.6
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 7.9e-08 61.2 60 53.3


User provided reference genes

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