Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.2e-188 662.9 322 100.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.4e-69 266.2 138 97.1
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.4e-69 266.2 138 97.1
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.7e-65 253.8 138 93.5
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 3.9e-65 252.7 133 95.5
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 1.1e-64 251.1 128 97.7
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 4.3e-64 249.2 133 94.7
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 4.7e-63 245.7 128 95.3
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 8.0e-63 245.0 125 97.6
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.8e-62 241.9 138 90.6
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 6.8e-62 241.9 120 100.0
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.5e-61 240.7 123 97.6
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.6e-61 240.0 123 96.7
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 5.8e-61 238.8 146 84.9
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 5.8e-61 238.8 128 94.5
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 5.8e-61 238.8 128 94.5
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 5.8e-61 238.8 128 94.5
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 1.1e-59 234.6 121 95.9
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 1.3e-57 227.6 142 83.1
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.9e-57 226.1 124 89.5
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 3.3e-56 223.0 131 87.8
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 8.6e-49 198.4 101 97.0
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.5e-48 197.6 124 82.3
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 5.6e-48 195.7 103 96.1
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.2e-45 188.0 129 76.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 4.6e-42 176.0 118 80.5
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 1.0e-41 174.9 93 95.7
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 1.0e-41 174.9 93 95.7
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.7e-41 174.1 100 90.0
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.9e-41 172.9 102 86.3
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.6e-41 172.2 86 97.7
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.3e-40 169.9 95 87.4
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 2.8e-39 166.8 93 92.5
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 3.6e-39 166.4 100 88.0
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 4.0e-38 162.9 91 92.3
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 4.0e-38 162.9 83 98.8
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 1.5e-37 161.0 93 90.3
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 3.4e-37 159.8 83 97.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 9.9e-37 158.3 87 87.4
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 7.8e-34 148.7 92 80.4
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 1.1e-32 144.8 91 82.4
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 1.1e-32 144.8 91 82.4
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 1.1e-32 144.8 91 82.4
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 1.1e-32 144.8 91 82.4
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 2.5e-32 143.7 78 92.3
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 7.3e-32 142.1 79 94.9
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 9.6e-32 141.7 88 83.0
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 2.0e-29 134.0 65 98.5
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 7.6e-29 132.1 90 80.0
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 2.9e-28 130.2 85 76.5
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 6.4e-28 129.0 68 95.6
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.9e-27 127.5 66 90.9
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 3.2e-27 126.7 64 100.0
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 5.4e-27 125.9 64 96.9
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.6e-26 124.4 63 100.0
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.8e-25 120.9 72 88.9
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 5.1e-25 119.4 60 100.0
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 1.5e-24 117.9 77 81.8
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.3e-23 114.8 63 92.1
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.6e-23 114.4 56 100.0
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.2e-23 112.5 58 94.8
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.4e-22 111.3 101 63.4
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 2.0e-21 107.5 55 98.2
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 5.8e-21 105.9 59 91.5
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.9e-20 103.6 78 69.2
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 4.9e-20 102.8 115 54.8
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.1e-19 101.7 53 96.2
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.0e-17 95.1 68 66.2
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 7.4e-16 89.0 65 64.6
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.2e-15 85.9 73 61.6
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 1.1e-11 75.1 63 61.9
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 3.5e-10 70.1 54 70.4
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.0e-09 68.6 36 88.9
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 6.7e-09 65.9 36 88.9
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.8e-07 60.5 38 78.9
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 8.2e-07 58.9 31 87.1
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-06 56.2 37 70.3
Nitab4.5_0000280g0160 Nicotiana tabacum HOM05D018533 ORTHO05D282992 5.3e-06 56.2 82 42.7


User provided reference genes

Program Settings