Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G307.23 Capsicum annuum HOM05D001607 ORTHO05D001893 5.7e-220 767.3 392 100.0
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 9.7e-196 686.8 391 89.5
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 2.5e-175 619.0 389 81.7
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 3.7e-155 552.0 409 71.6
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.1e-154 550.4 413 71.2
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 4.1e-154 548.5 399 71.2
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 1.2e-153 547.0 404 69.6
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 4.6e-153 545.0 414 69.6
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 6.0e-153 544.7 413 67.6
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.3e-152 543.5 400 69.5
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 3.0e-152 542.3 409 69.2
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 3.0e-152 542.3 409 67.7
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 5.1e-152 541.6 413 69.5
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 8.6e-152 540.8 409 66.7
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.5e-151 540.0 400 69.0
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.3e-151 538.9 400 68.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 4.3e-151 538.5 402 67.4
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 5.6e-151 538.1 401 69.6
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 7.3e-151 537.7 401 71.1
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 4.7e-150 535.0 405 67.9
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.1e-150 534.3 413 66.8
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 1.8e-149 533.1 402 69.4
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 3.1e-149 532.3 402 68.7
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 3.1e-149 532.3 401 67.8
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 4.0e-149 531.9 405 69.4
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.2e-148 530.4 417 66.7
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.2e-148 530.4 411 67.4
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 3.4e-148 528.9 410 67.1
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.8e-148 528.1 410 66.8
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 7.6e-148 527.7 413 67.1
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 7.6e-148 527.7 401 68.3
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 9.9e-148 527.3 410 66.8
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 9.9e-148 527.3 410 66.8
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 9.9e-148 527.3 412 66.5
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-147 526.9 410 66.8
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.3e-147 526.9 410 66.6
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 2.2e-147 526.2 409 68.5
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.9e-147 525.8 410 66.6
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.1e-146 523.9 411 65.7
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 4.1e-146 521.9 411 66.7
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 9.2e-146 520.8 410 66.6
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 2.1e-145 519.6 426 65.5
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.5e-145 518.8 413 64.2
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 4.6e-145 518.5 405 66.7
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 1.7e-144 516.5 405 66.4
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 3.0e-144 515.8 411 65.9
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.5e-143 513.5 420 64.8
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.2e-142 510.4 402 66.2
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 2.1e-142 509.6 416 63.7
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 4.7e-142 508.4 402 65.4
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.4e-141 506.9 402 66.9
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.4e-141 506.9 415 64.3
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 2.4e-141 506.1 424 63.9
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 3.1e-141 505.8 413 63.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 4.0e-141 505.4 411 64.7
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 2.6e-140 502.7 413 64.6
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 7.6e-140 501.1 403 64.5
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 2.4e-138 496.1 408 64.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 4.2e-138 495.4 415 62.9
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 4.2e-138 495.4 408 64.7
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 9.3e-138 494.2 402 64.9
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 1.2e-137 493.8 424 62.3
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.1e-137 493.0 413 63.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 3.5e-137 492.3 402 64.7
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 3.5e-137 492.3 401 63.3
Psat0s3405g0080 Pisum sativum HOM05D001607 ORTHO05D001893 2.3e-136 489.6 413 61.7
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.9e-136 488.8 403 63.8
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.9e-135 486.5 400 64.0
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 2.5e-135 486.1 401 62.8
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 2.5e-135 486.1 408 63.7
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.6e-134 483.4 407 61.7
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.6e-134 483.4 401 62.6
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 2.8e-134 482.6 410 64.6
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 4.0e-133 478.8 408 62.3
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 3.4e-132 475.7 401 63.3
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 9.9e-132 474.2 334 76.3
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 1.7e-131 473.4 401 62.6
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 1.7e-131 473.4 401 61.8
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 1.7e-131 473.4 425 60.0
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 2.2e-131 473.0 407 60.4
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 6.4e-131 471.5 407 60.9
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 8.4e-131 471.1 413 60.0
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.1e-130 470.7 406 61.6
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 1.4e-130 470.3 401 62.3
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 1.4e-130 470.3 401 62.3
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 3.2e-130 469.2 401 62.1
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 7.1e-130 468.0 401 62.1
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 9.3e-130 467.6 401 62.1
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.2e-129 467.2 407 60.4
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.1e-129 466.5 403 60.0
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 2.1e-129 466.5 417 59.7
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 4.6e-129 465.3 401 62.1
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 2.3e-128 463.0 402 60.9
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 3.0e-128 462.6 401 61.1
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 1.9e-127 459.9 401 60.8
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 2.5e-127 459.5 401 60.1
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 1.3e-126 457.2 401 60.1
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.6e-126 456.8 410 59.0
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 4.8e-126 455.3 403 59.6
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 4.8e-126 455.3 403 59.6
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 1.1e-125 454.1 410 59.8
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 1.1e-125 454.1 401 60.3
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 2.4e-125 453.0 410 59.5
Gorai.004G118400 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.1e-125 452.6 367 64.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 5.3e-125 451.8 399 59.1
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.0e-120 437.6 398 56.8
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.8e-120 436.8 420 59.8
Gohir.D08G110708 Gossypium hirsutum HOM05D001607 ORTHO05D001893 7.4e-119 431.4 350 64.9
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 2.0e-116 423.3 350 65.7
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 1.9e-114 416.8 397 53.9
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.5e-108 397.1 411 54.0
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 7.6e-108 394.8 401 54.4
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 9.3e-106 387.9 321 65.7
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 3.0e-104 382.9 401 50.6
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 5.9e-100 368.6 301 65.4
Peaxi162Scf00444g00722 Petunia axillaris HOM05D001607 ORTHO05D001893 2.2e-99 366.7 211 86.7
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 3.3e-95 352.8 393 51.9
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.4e-93 347.4 405 50.6
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 6.9e-93 345.1 268 67.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 1.5e-92 344.0 515 42.9
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 2.2e-91 340.1 405 49.6
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 1.6e-89 334.0 226 76.5
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 2.7e-89 333.2 431 43.4
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 6.7e-88 328.6 442 43.0
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-82 311.2 381 50.1
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 4.2e-82 309.3 417 42.4
Nitab4.5_0005845g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.4e-80 304.3 180 85.0
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 1.8e-80 303.9 410 42.2
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 5.2e-80 302.4 380 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 2.4e-77 293.5 465 37.6
Ca_27533_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.8e-72 277.3 236 62.3
Peaxi162Scf00444g00717 Petunia axillaris HOM05D001607 ORTHO05D001893 8.3e-70 268.5 231 65.4
Solyc03g025630.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 2.5e-58 230.3 139 84.9
CDE08G1124 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.2e-49 201.4 183 57.9
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 1.6e-49 201.1 193 56.5
THA.LOC104825607 Tarenaya hassleriana HOM05D001607 ORTHO05D000093 2.1e-49 200.7 162 63.6
unitig_46.g18793 Utricularia gibba HOM05D001607 ORTHO05D001893 2.9e-46 190.3 140 67.9
Hund04843 Selenicereus undatus HOM05D001607 ORTHO05D001893 2.7e-44 183.7 140 64.3
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 6.8e-40 169.1 396 31.8
vmacro06667 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 1.2e-36 158.3 128 60.9
QL09p013882 Quercus lobata HOM05D001607 ORTHO05D001893 1.3e-35 154.8 99 74.7
BcaNung05685 Brassica carinata HOM05D001607 ORTHO05D001893 2.8e-33 147.1 177 45.8
arahy.Tifrunner.gnm1.ann1.7UXB07 Arachis hypogaea HOM05D001607 ORTHO05D001893 9.9e-31 138.7 109 60.6
MD07G1272200 Malus domestica HOM05D001607 ORTHO05D001893 2.2e-30 137.5 101 73.3
arahy.Tifrunner.gnm1.ann1.B9FIPF Arachis hypogaea HOM05D001607 ORTHO05D001893 1.7e-27 127.9 110 57.3
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.9e-27 126.7 80 73.8
SEGI_36427 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 3.3e-26 123.6 143 46.9
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 6.2e-25 119.4 456 26.1
Ca_27875_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.3e-19 101.7 100 56.0
PGSC0003DMG400019983 Solanum tuberosum HOM05D001607 ORTHO05D000214 1.3e-19 101.7 186 37.6
QL93p2019_0012 Quercus lobata HOM05D001607 ORTHO05D001893 1.1e-16 92.0 47 91.5
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 3.1e-16 90.5 47 91.5
COL.COLO4_14279 Corchorus olitorius HOM05D000257 ORTHO05D009129 4.0e-16 90.1 53 73.6
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 9.9e-15 85.5 49 81.6
MELO3C034501.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.2e-13 80.5 58 62.1
BcaNung07357 Brassica carinata HOM05D001607 ORTHO05D001893 1.6e-12 78.2 114 46.5
TPR.G34952 Trifolium pratense HOM05D001607 ORTHO05D001893 3.7e-09 67.0 55 67.3
SHI13772 Sapria himalayana HOM05D001607 ORTHO05D001893 4.5e-07 60.1 51 56.9
ECA233G1901 Erigeron canadensis HOM05D001607 ORTHO05D187244 1.7e-06 58.2 67 53.7


User provided reference genes

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