Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 4.1e-95 351.3 165 100.0
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.8e-63 246.1 161 70.8
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.6e-54 214.9 163 60.1
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.5e-52 207.2 157 61.1
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 7.5e-49 197.6 164 54.9
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 8.3e-48 194.1 163 54.0
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.8e-46 187.6 163 53.4
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 1.0e-45 187.2 163 52.8
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.5e-44 180.6 163 51.5
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 3.6e-43 178.7 160 49.4
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 5.2e-42 174.9 164 52.4
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.2e-42 174.9 160 52.5
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 2.6e-41 172.6 163 49.7
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 3.4e-41 172.2 163 49.7
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.4e-41 171.8 163 51.5
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.4e-41 171.8 163 49.7
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.8e-41 171.4 163 50.9
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 9.9e-41 170.6 163 49.7
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.9e-41 170.6 163 49.1
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.7e-40 169.9 164 49.4
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.2e-40 169.5 159 50.9
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 4.1e-39 165.2 160 48.8
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 5.4e-39 164.9 161 49.1
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 2.1e-38 162.9 163 49.7
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 6.0e-38 161.4 153 52.3
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 7.8e-38 161.0 162 45.7
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.6e-37 157.9 160 49.4
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 6.2e-35 151.4 166 43.4
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.4e-34 150.2 171 43.3
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-34 149.4 160 47.5
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-33 147.1 153 49.0
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 4.9e-32 141.7 162 46.9
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 1.9e-31 139.8 164 43.3
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-30 136.3 116 54.3
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.7e-30 136.0 113 56.6
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 8.7e-29 131.0 167 39.5
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 2.5e-28 129.4 145 44.1
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 9.6e-28 127.5 153 41.8
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 2.4e-26 122.9 165 40.0
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.0e-26 120.9 103 55.3
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.2e-25 120.6 165 38.8
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.2e-25 120.6 131 43.5
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.7e-24 116.7 131 42.0
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.1e-22 109.8 124 43.5
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.8e-21 106.7 146 37.7
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 8.7e-21 104.4 162 42.0
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.6e-19 100.1 161 36.0
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 2.1e-19 99.8 152 38.8
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 6.2e-19 98.2 120 44.2
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 1.4e-18 97.1 152 38.8
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.8e-18 96.7 117 39.3
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.4e-18 96.3 134 37.3
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-17 93.6 116 43.1
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 2.9e-16 89.4 158 33.5
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 2.9e-16 89.4 197 32.0
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.9e-16 88.6 108 41.7
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 7.1e-15 84.7 112 41.1
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 7.1e-15 84.7 135 34.8
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.3e-15 84.3 112 39.3
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.2e-14 84.0 163 31.9
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.7e-14 82.8 135 34.1
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.1e-13 78.6 186 30.1
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-13 77.8 138 37.7
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 5.6e-12 75.1 150 34.0
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 7.4e-12 74.7 171 32.7
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 1.3e-11 73.9 108 36.1
Solyc10g051210.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.8e-11 72.8 119 37.0
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.4e-10 69.7 164 28.7
FAN06G2767 Fragaria x ananassa HOM05D008174 ORTHO05D010206 3.4e-09 65.9 96 37.5
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 4.5e-09 65.5 60 50.0
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.0e-08 64.3 126 32.5
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 2.9e-08 62.8 70 40.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.5e-08 61.6 77 37.7
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 1.2e-06 57.4 89 32.6
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 2.1e-06 56.6 155 32.9


User provided reference genes

Program Settings