Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 3.6e-71 271.6 144 100.0
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.0e-58 229.2 131 93.1
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.6e-55 219.5 131 89.3
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.3e-52 207.2 130 86.9
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.4e-51 206.5 130 86.2
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 3.2e-51 205.3 131 84.7
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 2.2e-44 182.6 138 73.2
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-43 180.3 135 69.6
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 7.0e-43 177.6 139 68.3
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 9.2e-43 177.2 135 71.1
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.2e-42 176.8 138 70.3
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 1.6e-42 176.4 133 70.7
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.6e-42 176.4 139 69.1
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.1e-42 176.0 138 70.3
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.7e-42 175.6 138 71.0
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.7e-42 175.6 133 66.9
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.5e-42 175.3 139 67.6
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.5e-42 175.3 139 68.3
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 3.5e-42 175.3 135 69.6
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 3.5e-42 175.3 132 70.5
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 4.6e-42 174.9 135 68.1
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.6e-42 174.9 131 69.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.6e-42 174.9 131 69.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.6e-42 174.9 132 69.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 6.0e-42 174.5 139 69.8
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 7.8e-42 174.1 138 68.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 7.8e-42 174.1 128 71.9
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.3e-41 173.3 131 71.8
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 1.3e-41 173.3 138 68.1
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.7e-41 172.9 132 69.7
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 1.7e-41 172.9 131 71.0
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.3e-41 172.6 139 66.9
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 3.9e-41 171.8 138 66.7
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.9e-41 171.8 138 67.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.9e-41 171.8 128 69.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 3.9e-41 171.8 130 70.0
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 6.6e-41 171.0 138 66.7
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.6e-41 171.0 131 67.2
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 8.6e-41 170.6 127 70.9
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 8.6e-41 170.6 135 65.2
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.1e-40 170.2 139 67.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.1e-40 170.2 132 65.9
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 3.3e-40 168.7 131 67.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 4.3e-40 168.3 135 63.7
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.6e-40 167.9 135 67.4
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 5.6e-40 167.9 135 68.1
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 7.3e-40 167.5 136 69.1
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 7.3e-40 167.5 129 70.5
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 7.3e-40 167.5 138 65.9
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.2e-39 166.8 135 65.2
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.6e-39 166.4 135 66.7
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 2.1e-39 166.0 130 67.7
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 2.8e-39 165.6 143 62.2
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.8e-39 165.6 134 66.4
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 3.6e-39 165.2 142 63.4
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 3.6e-39 165.2 138 63.8
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 4.7e-39 164.9 130 68.5
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 6.2e-39 164.5 133 63.2
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 6.2e-39 164.5 135 67.4
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 6.2e-39 164.5 130 69.2
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 6.2e-39 164.5 130 65.4
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 8.1e-39 164.1 138 61.6
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 8.1e-39 164.1 138 63.0
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 1.1e-38 163.7 138 63.0
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-38 162.5 143 59.4
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 3.1e-38 162.2 138 61.6
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 4.0e-38 161.8 138 60.1
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 5.2e-38 161.4 133 63.2
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.2e-38 161.4 133 63.2
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 5.2e-38 161.4 131 66.4
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 5.2e-38 161.4 143 62.9
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 6.8e-38 161.0 131 65.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.5e-37 159.8 139 64.7
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 1.5e-37 159.8 138 60.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.5e-37 159.8 143 56.6
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.5e-37 159.8 143 56.6
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 1.5e-37 159.8 143 56.6
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.5e-37 159.8 142 60.6
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.5e-37 159.8 135 62.2
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.0e-37 159.5 129 66.7
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.4e-37 158.3 133 62.4
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 7.5e-37 157.5 135 60.7
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 9.9e-37 157.1 138 59.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 9.9e-37 157.1 138 59.4
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 9.9e-37 157.1 131 65.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.3e-36 156.8 133 66.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 2.2e-36 156.0 143 55.2
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.2e-36 156.0 131 64.1
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.9e-36 154.8 121 66.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.9e-35 152.9 130 62.3
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.4e-35 152.5 138 58.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.4e-35 152.5 128 63.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.2e-35 152.1 138 60.1
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 4.1e-35 151.8 128 64.1
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.6e-34 149.8 130 61.5
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 2.7e-34 149.1 138 61.6
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.3e-33 146.7 129 65.1
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.7e-33 146.4 131 60.3
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 2.3e-33 146.0 136 56.6
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.3e-33 146.0 128 60.2
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 7.3e-32 141.0 81 93.8
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 9.5e-32 140.6 131 58.8
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.3e-28 130.2 126 55.6
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 4.9e-28 128.3 117 58.1
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 6.4e-28 127.9 131 58.8
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.6e-26 123.2 104 65.4
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.5e-26 122.1 128 55.5
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 7.3e-24 114.4 131 51.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.5e-21 106.7 74 74.3
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.8e-18 94.4 80 62.5
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.5e-16 90.1 73 67.1
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 8.1e-15 84.3 73 63.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.8e-14 83.2 121 43.8
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.9e-11 73.2 99 44.4
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.9e-11 73.2 110 42.7
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 4.2e-11 72.0 65 60.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 6.0e-10 68.2 129 34.9
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.3e-08 62.0 46 65.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 9.6e-08 60.8 47 70.2


User provided reference genes

Program Settings