Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 5.4e-51 204.1 111 100.0
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 5.3e-38 161.0 130 74.6
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 1.5e-37 159.5 130 73.8
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 3.4e-37 158.3 130 73.1
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.3e-36 156.4 98 86.7
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 4.6e-34 147.9 157 60.5
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 4.3e-32 141.4 110 75.5
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 3.5e-26 121.7 125 58.4
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 3.5e-26 121.7 127 59.1
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 3.5e-26 121.7 127 59.1
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 6.0e-26 120.9 130 58.5
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 5.1e-25 117.9 128 57.0
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 6.7e-25 117.5 130 56.2
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 1.1e-24 116.7 128 57.0
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 1.9e-24 115.9 133 56.4
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 3.3e-24 115.2 153 52.3
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 4.3e-24 114.8 127 55.9
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 7.4e-24 114.0 130 56.2
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 7.4e-24 114.0 129 57.4
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 9.6e-24 113.6 130 55.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.3e-23 113.2 130 56.9
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.8e-23 112.1 130 57.7
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 2.8e-23 112.1 126 56.3
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 3.7e-23 111.7 130 58.5
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 3.7e-23 111.7 115 59.1
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 3.7e-23 111.7 131 53.4
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 4.8e-23 111.3 130 53.1
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 4.8e-23 111.3 129 57.4
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 6.2e-23 110.9 91 67.0
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 8.2e-23 110.5 105 63.8
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 8.2e-23 110.5 130 53.1
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 1.4e-22 109.8 88 68.2
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 1.4e-22 109.8 98 63.3
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 1.8e-22 109.4 101 63.4
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.8e-22 109.4 91 65.9
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.8e-22 109.4 130 57.7
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.8e-22 109.4 128 53.9
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.4e-22 109.0 86 68.6
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.4e-22 109.0 91 67.0
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 2.4e-22 109.0 129 54.3
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 3.1e-22 108.6 126 54.0
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.0e-22 108.2 79 72.2
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.0e-22 108.2 79 72.2
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 5.3e-22 107.8 99 64.6
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 6.9e-22 107.5 125 53.6
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 9.0e-22 107.1 91 65.9
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 9.0e-22 107.1 77 74.0
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 1.2e-21 106.7 127 55.1
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.0e-21 105.9 127 53.5
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.0e-21 105.9 126 53.2
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.0e-21 105.9 129 52.7
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 2.6e-21 105.5 91 63.7
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 2.6e-21 105.5 130 55.4
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.6e-21 105.5 121 57.0
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-21 105.1 79 69.6
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 3.4e-21 105.1 79 69.6
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 3.4e-21 105.1 99 62.6
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 4.5e-21 104.8 85 65.9
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 5.8e-21 104.4 127 56.7
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 7.6e-21 104.0 122 54.1
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 7.6e-21 104.0 128 56.2
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 7.6e-21 104.0 128 56.2
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 7.6e-21 104.0 76 76.3
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 1.7e-20 102.8 89 65.2
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.7e-20 102.8 128 56.2
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 2.2e-20 102.4 91 61.5
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 2.2e-20 102.4 104 61.5
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 3.8e-20 101.7 130 51.5
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 4.9e-20 101.3 89 61.8
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 8.4e-20 100.5 91 61.5
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.1e-19 100.1 91 62.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.5e-19 99.0 101 61.4
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 3.2e-19 98.6 124 53.2
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 7.1e-19 97.4 124 52.4
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.2e-18 96.7 127 49.6
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.7e-18 95.5 102 59.8
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.7e-18 95.5 102 59.8
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.7e-18 95.5 102 59.8
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 3.5e-18 95.1 127 47.2
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 4.6e-18 94.7 139 51.8
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 7.9e-18 94.0 87 60.9
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 1.0e-17 93.6 124 49.2
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.0e-17 93.6 125 48.8
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.0e-17 93.6 125 48.8
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.3e-17 93.2 125 48.8
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.3e-17 93.2 125 48.8
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.3e-17 93.2 125 48.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 1.3e-17 93.2 125 48.0
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 1.8e-17 92.8 125 48.0
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 3.9e-17 91.7 124 49.2
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 5.1e-17 91.3 132 48.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 5.1e-17 91.3 100 62.0
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 5.1e-17 91.3 100 62.0
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 6.7e-17 90.9 127 48.0
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.1e-16 90.1 129 46.5
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.1e-16 90.1 126 47.6
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-16 90.1 126 47.6
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.1e-16 90.1 126 47.6
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 1.9e-16 89.4 130 50.0
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 4.8e-15 84.7 83 59.0
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 1.8e-14 82.8 99 53.5
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 2.4e-14 82.4 70 57.1
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 5.3e-14 81.3 87 52.9
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.5e-13 79.7 87 52.9
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 3.2e-11 72.0 91 48.4
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 9.4e-11 70.5 130 40.8
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.2e-10 70.1 76 52.6
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 1.9e-08 62.8 130 40.8
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 6.9e-06 54.3 44 61.4
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 9.1e-06 53.9 87 42.5


User provided reference genes

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