Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G300.7 Capsicum annuum HOM05D003489 ORTHO05D004109 5.5e-53 210.7 106 100.0
CAN.G395.5 Capsicum annuum HOM05D003489 ORTHO05D004109 7.2e-45 183.7 104 86.5
CAN.G368.2 Capsicum annuum HOM05D003489 ORTHO05D004109 1.8e-43 179.1 104 86.5
CAN.G213.21 Capsicum annuum HOM05D003489 ORTHO05D004109 8.8e-43 176.8 104 81.7
CAN.G426.31 Capsicum annuum HOM05D003489 ORTHO05D004109 2.0e-42 175.6 104 83.7
Solyc07g066630.4 Solanum lycopersicum HOM05D003489 ORTHO05D004109 1.7e-41 172.6 100 86.0
Sopen07g034780 Solanum pennellii HOM05D003489 ORTHO05D004109 1.7e-41 172.6 100 86.0
CAN.G943.55 Capsicum annuum HOM05D003489 ORTHO05D004109 8.3e-41 170.2 100 86.0
Peaxi162Scf00452g00336 Petunia axillaris HOM05D003489 ORTHO05D004109 1.1e-40 169.9 100 84.0
Nitab4.5_0000029g0290 Nicotiana tabacum HOM05D003489 ORTHO05D004109 1.4e-40 169.5 100 84.0
Nitab4.5_0000029g0300 Nicotiana tabacum HOM05D003489 ORTHO05D004109 4.1e-40 167.9 99 83.8
Lj2A13T24 Lonicera japonica HOM05D003489 ORTHO05D004109 6.6e-38 160.6 99 79.8
HanXRQChr03g0078181 Helianthus annuus HOM05D003489 ORTHO05D004109 8.6e-38 160.2 101 78.2
vmacro09770 Vaccinium macrocarpon HOM05D003489 ORTHO05D004109 1.5e-37 159.5 99 77.8
AUR62040866 Chenopodium quinoa HOM05D003489 ORTHO05D004109 3.3e-37 158.3 96 80.2
Ah.10g033720 Amaranthus hybridus HOM05D003489 ORTHO05D004109 5.6e-37 157.5 99 77.8
MSTRG.16098 Avicennia marina HOM05D003489 ORTHO05D004109 5.6e-37 157.5 99 76.8
Ciclev10005524m.g Citrus clementina HOM05D003489 ORTHO05D004109 5.6e-37 157.5 99 77.8
Rhsim04G0003000 Rhododendron simsii HOM05D003489 ORTHO05D004109 5.6e-37 157.5 99 76.8
CSS0010976 Camellia sinensis var. sinensis HOM05D003489 ORTHO05D004109 7.3e-37 157.1 99 76.8
Migut.H01667 Erythranthe guttata HOM05D003489 ORTHO05D004109 7.3e-37 157.1 99 77.8
MBI18_g11461_MAGBIO Magnolia biondii HOM05D003489 ORTHO05D004109 7.3e-37 157.1 99 76.8
Manes.14G009200 Manihot esculenta HOM05D003489 ORTHO05D004109 7.3e-37 157.1 99 76.8
Potri.012G125900 Populus trichocarpa HOM05D003489 ORTHO05D004109 7.3e-37 157.1 101 76.2
SGA_v2.0_scaffold47G17759 Striga asiatica HOM05D003489 ORTHO05D004109 7.3e-37 157.1 99 76.8
FAN11G1209 Fragaria x ananassa HOM05D003489 ORTHO05D004109 9.5e-37 156.8 103 74.8
Oeu019723.1 Olea europaea HOM05D003489 ORTHO05D004109 9.5e-37 156.8 99 76.8
GSVIVG01036762001 Vitis vinifera HOM05D003489 ORTHO05D004109 9.5e-37 156.8 99 77.8
CANSAT80G0618 Cannabis sativa HOM05D003489 ORTHO05D004109 1.6e-36 156.0 99 77.8
CAN.G764.1 Capsicum annuum HOM05D003489 ORTHO05D004109 1.6e-36 156.0 104 77.9
Migut.M01523 Erythranthe guttata HOM05D003489 ORTHO05D004109 1.6e-36 156.0 100 78.0
Oeu043715.1 Olea europaea HOM05D003489 ORTHO05D004109 1.6e-36 156.0 99 76.8
ECA240G1189 Erigeron canadensis HOM05D003489 ORTHO05D004109 2.1e-36 155.6 101 76.2
Gorai.009G353800 Gossypium raimondii HOM05D003489 ORTHO05D004109 2.1e-36 155.6 99 76.8
Hma1.2p1_0151F.1_g067260 Hydrangea macrophylla HOM05D003489 ORTHO05D004109 2.1e-36 155.6 99 74.7
Nn7g38230 Nelumbo nucifera HOM05D003489 ORTHO05D004109 2.1e-36 155.6 99 76.8
Actinidia22416 Actinidia chinensis HOM05D003489 ORTHO05D004109 2.8e-36 155.2 99 74.7
CAN.G15.4 Capsicum annuum HOM05D003489 ORTHO05D004109 3.6e-36 154.8 97 81.4
CiPaw.11G061000 Carya illinoinensis HOM05D003489 ORTHO05D004109 3.6e-36 154.8 99 76.8
QL04p087224 Quercus lobata HOM05D003489 ORTHO05D004109 3.6e-36 154.8 99 76.8
EL10Ac2g03234 Beta vulgaris HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 76.8
AUR62032089 Chenopodium quinoa HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 76.8
Cc05_g16430 Coffea canephora HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 77.8
Psat4g137680 Pisum sativum HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 76.8
Sc18g0003310 Simmondsia chinensis HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 75.8
Thecc.07G182300 Theobroma cacao HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 74.7
TAR626G0906 Trochodendron aralioides HOM05D003489 ORTHO05D004109 4.7e-36 154.5 99 76.8
Eucgr.F04461 Eucalyptus grandis HOM05D003489 ORTHO05D004109 6.1e-36 154.1 99 75.8
Gohir.A04G050800 Gossypium hirsutum HOM05D003489 ORTHO05D004109 6.1e-36 154.1 99 75.8
arahy.Tifrunner.gnm1.ann1.JYF968 Arachis hypogaea HOM05D003489 ORTHO05D004109 8.0e-36 153.7 97 75.3
arahy.Tifrunner.gnm1.ann1.T86MTP Arachis hypogaea HOM05D003489 ORTHO05D004109 8.0e-36 153.7 99 74.7
Cfa019401 Carpinus fangiana HOM05D003489 ORTHO05D004109 8.0e-36 153.7 99 74.7
TWI38G2359 Tripterygium wilfordii HOM05D003489 ORTHO05D004109 8.0e-36 153.7 99 74.7
TAR624G0253 Trochodendron aralioides HOM05D003489 ORTHO05D004109 8.0e-36 153.7 99 75.8
PGR031G2340 Punica granatum HOM05D003489 ORTHO05D004109 1.0e-35 153.3 99 73.7
Dinv19586 Davidia involucrata HOM05D003489 ORTHO05D004109 1.4e-35 152.9 99 75.8
FvH4_3g14740 Fragaria vesca HOM05D003489 ORTHO05D004109 1.4e-35 152.9 99 75.8
FAN16G2962 Fragaria x ananassa HOM05D003489 ORTHO05D004109 1.4e-35 152.9 99 75.8
FAN21G0618 Fragaria x ananassa HOM05D003489 ORTHO05D004109 1.4e-35 152.9 99 75.8
FAN25G2342 Fragaria x ananassa HOM05D003489 ORTHO05D004109 1.4e-35 152.9 99 75.8
DCAR_019918 Daucus carota HOM05D003489 ORTHO05D004109 1.8e-35 152.5 100 76.0
Sabra12G0094800 Salix brachista HOM05D003489 ORTHO05D004109 1.8e-35 152.5 101 75.2
CANSAT80G0498 Cannabis sativa HOM05D003489 ORTHO05D004109 2.3e-35 152.1 99 72.7
Medtr8g442750 Medicago truncatula HOM05D003489 ORTHO05D004109 2.3e-35 152.1 99 75.8
PSO675G6571 Papaver somniferum HOM05D003489 ORTHO05D004109 3.0e-35 151.8 99 72.7
Sed0005392 Sechium edule HOM05D003489 ORTHO05D004109 3.0e-35 151.8 99 73.7
THA.LOC104826329 Tarenaya hassleriana HOM05D003489 ORTHO05D004109 3.0e-35 151.8 99 75.8
TPR.G9418 Trifolium pratense HOM05D003489 ORTHO05D004109 3.0e-35 151.8 99 75.8
unitig_578.g16335 Utricularia gibba HOM05D003489 ORTHO05D004109 3.0e-35 151.8 99 77.8
Haze_07801 Corylus avellana HOM05D003489 ORTHO05D004109 4.0e-35 151.4 99 73.7
Glyma.08G237400 Glycine max HOM05D003489 ORTHO05D004109 4.0e-35 151.4 100 77.0
Lsat_1_v5_gn_7_75601 Lactuca sativa HOM05D003489 ORTHO05D004109 4.0e-35 151.4 101 75.2
Duzib268G0350 Durio zibethinus HOM05D003489 ORTHO05D004109 5.2e-35 151.0 99 75.8
PSO675G1648 Papaver somniferum HOM05D003489 ORTHO05D004109 5.2e-35 151.0 99 72.7
FAN16G1927 Fragaria x ananassa HOM05D003489 ORTHO05D004109 6.8e-35 150.6 99 72.7
Gohir.D08G252400 Gossypium hirsutum HOM05D003489 ORTHO05D004109 6.8e-35 150.6 99 74.7
Gorai.004G269100 Gossypium raimondii HOM05D003489 ORTHO05D004109 6.8e-35 150.6 99 74.7
vmacro23254 Vaccinium macrocarpon HOM05D003489 ORTHO05D004109 6.8e-35 150.6 99 71.7
Manes.03G069001 Manihot esculenta HOM05D003489 ORTHO05D004109 8.9e-35 150.2 99 72.7
GSVIVG01012113001 Vitis vinifera HOM05D003489 ORTHO05D004109 8.9e-35 150.2 99 71.7
Cpa.g.sc30.144 Carica papaya HOM05D003489 ORTHO05D004109 1.2e-34 149.8 100 72.0
Lalb_Chr19g0133211 Lupinus albus HOM05D003489 ORTHO05D004109 1.2e-34 149.8 99 72.7
RcHm_v2.0_Chr5g0024271 Rosa chinensis HOM05D003489 ORTHO05D004109 1.2e-34 149.8 99 73.7
FAN21G3976 Fragaria x ananassa HOM05D003489 ORTHO05D004109 1.5e-34 149.4 99 71.7
MD10G1209100 Malus domestica HOM05D003489 ORTHO05D004109 2.0e-34 149.1 99 71.7
Glyma.15G213100 Glycine max HOM05D003489 ORTHO05D004109 2.6e-34 148.7 100 76.0
Gohir.A08G232000 Gossypium hirsutum HOM05D003489 ORTHO05D004109 2.6e-34 148.7 99 73.7
PGSC0003DMG402022117 Solanum tuberosum HOM05D003489 ORTHO05D004109 2.6e-34 148.7 86 84.9
Prupe.4G132600 Prunus persica HOM05D003489 ORTHO05D004109 3.4e-34 148.3 99 73.7
ClCG09G022700 Citrullus lanatus HOM05D003489 ORTHO05D004109 4.4e-34 147.9 99 71.7
DCAR_007785 Daucus carota HOM05D032355 ORTHO05D004109 4.4e-34 147.9 99 70.7
Sabra06G0018700 Salix brachista HOM05D003489 ORTHO05D004109 4.4e-34 147.9 99 72.7
BcaB06g25510 Brassica carinata HOM05D003489 ORTHO05D004109 5.7e-34 147.5 101 74.3
CSS0044390 Camellia sinensis var. sinensis HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 70.7
FvH4_3g12490 Fragaria vesca HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 71.7
FAN25G0305 Fragaria x ananassa HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 70.7
Lj3g0015370 Lotus japonicus HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 73.7
PSO541G1044 Papaver somniferum HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 71.7
PSO675G9327 Papaver somniferum HOM05D003489 ORTHO05D004109 5.7e-34 147.5 99 71.7
CARHR087330 Cardamine hirsuta HOM05D003489 ORTHO05D004109 7.5e-34 147.1 101 74.3
Phvul.011G177250 Phaseolus vulgaris HOM05D003489 ORTHO05D004109 7.5e-34 147.1 100 75.0
VMungo1127G1841 Vigna mungo HOM05D003489 ORTHO05D004109 7.5e-34 147.1 100 75.0
Aqoxy1G01416 Aquilegia oxysepala HOM05D003489 ORTHO05D004109 9.8e-34 146.7 100 73.0
MD05G1229700 Malus domestica HOM05D003489 ORTHO05D004109 9.8e-34 146.7 99 70.7
Potri.006G025400 Populus trichocarpa HOM05D003489 ORTHO05D004109 9.8e-34 146.7 99 72.7
COL.COLO4_19751 Corchorus olitorius HOM05D003489 ORTHO05D004109 1.3e-33 146.4 100 73.0
Dinv09060 Davidia involucrata HOM05D003489 ORTHO05D004109 1.3e-33 146.4 99 71.7
PGR004G2417 Punica granatum HOM05D003489 ORTHO05D004109 1.3e-33 146.4 99 70.7
Ca_25908_v3 Cicer arietinum L. HOM05D003489 ORTHO05D004109 1.7e-33 146.0 100 74.0
Ca_30115_v3 Cicer arietinum L. HOM05D003489 ORTHO05D004109 1.7e-33 146.0 100 74.0
AL3G24480 Arabidopsis lyrata HOM05D003489 ORTHO05D004109 2.2e-33 145.6 100 74.0
Eucgr.D00036 Eucalyptus grandis HOM05D003489 ORTHO05D004109 2.2e-33 145.6 99 69.7
BcaB04g18721 Brassica carinata HOM05D003489 ORTHO05D004109 2.9e-33 145.2 100 74.0
Cpa.g.sc32.29 Carica papaya HOM05D003489 ORTHO05D004109 2.9e-33 145.2 95 74.7
PSO675G0014 Papaver somniferum HOM05D003489 ORTHO05D004109 2.9e-33 145.2 100 73.0
Aqoxy72s003 Aquilegia oxysepala HOM05D003489 ORTHO05D004109 3.7e-33 144.8 96 74.0
A03p37810 Brassica napus HOM05D003489 ORTHO05D004109 3.7e-33 144.8 100 73.0
C05p55120 Brassica napus HOM05D001395 ORTHO05D004109 3.7e-33 144.8 101 73.3
BolC5t34180H Brassica oleracea HOM05D001395 ORTHO05D004109 3.7e-33 144.8 101 73.3
BraA03t12936Z Brassica rapa HOM05D003489 ORTHO05D004109 3.7e-33 144.8 100 73.0
MD05G1249900 Malus domestica HOM05D003489 ORTHO05D004109 3.7e-33 144.8 99 69.7
RcHm_v2.0_Chr5g0020441 Rosa chinensis HOM05D003489 ORTHO05D004109 4.9e-33 144.4 99 70.7
Sp3g10955 Schrenkiella parvula HOM05D003489 ORTHO05D004109 4.9e-33 144.4 100 74.0
Sp3g10960 Schrenkiella parvula HOM05D003489 ORTHO05D004109 4.9e-33 144.4 100 73.0
CDE06G1011 Ceratophyllum demersum HOM05D003489 ORTHO05D004109 6.4e-33 144.1 99 70.7
A05p36670 Brassica napus HOM05D001395 ORTHO05D004109 8.3e-33 143.7 101 72.3
BraA05t22470Z Brassica rapa HOM05D001395 ORTHO05D004109 8.3e-33 143.7 101 72.3
Cfa000694 Carpinus fangiana HOM05D003489 ORTHO05D004109 8.3e-33 143.7 100 69.0
BcaC01g04035 Brassica carinata HOM05D003489 ORTHO05D004109 1.1e-32 143.3 100 72.0
ATR0697G295 Amborella trichopoda HOM05D003489 ORTHO05D004109 1.4e-32 142.9 99 70.7
Carub.0003s1216 Capsella rubella HOM05D003489 ORTHO05D004109 1.4e-32 142.9 100 73.0
MELO3C012608.2 Cucumis melo HOM05D003489 ORTHO05D004109 1.4e-32 142.9 99 68.7
CsaV3_7G022900 Cucumis sativus L. HOM05D003489 ORTHO05D004109 1.4e-32 142.9 99 68.7
HPP92_016428 Vanilla planifolia HOM05D003489 ORTHO05D004109 1.4e-32 142.9 99 68.7
HPP92_026361 Vanilla planifolia HOM05D003489 ORTHO05D004109 1.4e-32 142.9 99 68.7
Aa31LG8G80 Aethionema arabicum HOM05D003489 ORTHO05D004109 1.8e-32 142.5 99 71.7
C03p45870 Brassica napus HOM05D001395 ORTHO05D004109 1.8e-32 142.5 100 72.0
BolC3t16863H Brassica oleracea HOM05D003489 ORTHO05D004109 1.8e-32 142.5 100 72.0
CiPaw.10G063600 Carya illinoinensis HOM05D003489 ORTHO05D004109 1.8e-32 142.5 99 69.7
Thhalv10021233m.g Eutrema salsugineum HOM05D003489 ORTHO05D004109 1.8e-32 142.5 100 73.0
Hma1.2p1_0181F.1_g080070 Hydrangea macrophylla HOM05D003489 ORTHO05D004109 2.4e-32 142.1 99 68.7
AT3G12800 Arabidopsis thaliana HOM05D003489 ORTHO05D004109 3.2e-32 141.7 100 72.0
Psat4g137640 Pisum sativum HOM05D003489 ORTHO05D004109 3.2e-32 141.7 100 69.0
Sed0021670 Sechium edule HOM05D003489 ORTHO05D004109 3.2e-32 141.7 99 69.7
Haze_06095 Corylus avellana HOM05D003489 ORTHO05D004109 4.1e-32 141.4 100 68.0
Prupe.4G113900 Prunus persica HOM05D003489 ORTHO05D004109 9.2e-32 140.2 99 68.7
Zm00001eb070900 Zea mays HOM05D003489 ORTHO05D004109 2.0e-31 139.0 99 65.7
SalBow8G4095 Salvia bowleyana HOM05D003489 ORTHO05D004109 2.7e-31 138.7 101 70.3
Os04g0614000 Oryza sativa ssp. japonica HOM05D003489 ORTHO05D004109 3.5e-31 138.3 99 65.7
Ciclev10016100m.g Citrus clementina HOM05D003489 ORTHO05D004109 4.6e-31 137.9 100 69.0
AagrBONN_evm.TU.Sc2ySwM_117.344 Anthoceros agrestis HOM05D003489 ORTHO05D004109 1.3e-30 136.3 99 66.7
Lj2A345T27 Lonicera japonica HOM05D003489 ORTHO05D004109 3.9e-30 134.8 99 64.6
Thecc.02G007100 Theobroma cacao HOM05D003489 ORTHO05D004109 5.0e-30 134.4 99 64.6
SEGI_41285 Sequoiadendron giganteum HOM05D003489 ORTHO05D004109 6.6e-30 134.0 96 67.7
Pp3c20_21940 Physcomitrium patens HOM05D003489 ORTHO05D004109 8.6e-30 133.7 99 62.6
COL.COLO4_17645 Corchorus olitorius HOM05D003489 ORTHO05D004109 1.1e-29 133.3 99 63.6
Gorai.008G049000 Gossypium raimondii HOM05D003489 ORTHO05D004109 1.5e-29 132.9 99 63.6
SEGI_16258 Sequoiadendron giganteum HOM05D003489 ORTHO05D004109 1.9e-29 132.5 97 66.0
TAR629G0486 Trochodendron aralioides HOM05D003489 ORTHO05D004109 2.5e-29 132.1 82 76.8
Gohir.A12G047600 Gossypium hirsutum HOM05D003489 ORTHO05D004109 4.3e-29 131.3 99 62.6
Gohir.D12G046300 Gossypium hirsutum HOM05D003489 ORTHO05D004109 5.6e-29 131.0 99 62.6
Duzib132G1003 Durio zibethinus HOM05D003489 ORTHO05D004109 9.5e-29 130.2 99 60.6
Lsat_1_v5_gn_3_107180 Lactuca sativa HOM05D003489 ORTHO05D004109 9.5e-29 130.2 99 66.7
Mapoly0057s0046 Marchantia polymorpha HOM05D003489 ORTHO05D004109 1.2e-28 129.8 99 60.6
Pp3c23_13630 Physcomitrium patens HOM05D003489 ORTHO05D004109 2.8e-28 128.6 100 63.0
CBR_g6539 Chara braunii HOM05D003489 ORTHO05D004109 1.0e-27 126.7 101 60.4
Duzib248G1596 Durio zibethinus HOM05D003489 ORTHO05D004109 2.3e-27 125.6 99 60.6
SMO116G0107 Selaginella moellendorffii HOM05D003489 ORTHO05D004109 6.8e-27 124.0 99 58.6
HanXRQChr12g0381551 Helianthus annuus HOM05D003489 ORTHO05D004109 8.9e-27 123.6 99 62.6
Zm00001eb430820 Zea mays HOM05D003489 ORTHO05D004109 1.5e-26 122.9 85 69.4
QL11p013743 Quercus lobata HOM05D003489 ORTHO05D004109 1.3e-25 119.8 81 67.9
ECA246G5026 Erigeron canadensis HOM05D003489 ORTHO05D004109 4.9e-25 117.9 99 60.6
Atru.chr10.457 Acer truncatum HOM05D003489 ORTHO05D004109 1.1e-24 116.7 99 63.6
AT2G07640 Arabidopsis thaliana HOM05D003489 ORTHO05D004109 1.6e-23 112.8 86 68.6
Oeu034981.1 Olea europaea HOM05D003489 ORTHO05D004109 3.5e-23 111.7 77 70.1
CAN.G1090.23 Capsicum annuum HOM05D003489 ORTHO05D004109 4.3e-21 104.8 61 86.9
AagrBONN_evm.TU.Sc2ySwM_117.1485 Anthoceros agrestis HOM05D003489 ORTHO05D004109 3.6e-20 101.7 96 57.3
SMO172G0050 Selaginella moellendorffii HOM05D003489 ORTHO05D004109 4.0e-19 98.2 99 55.6
HanXRQChr03g0078191 Helianthus annuus HOM05D003489 ORTHO05D004109 5.2e-19 97.8 61 82.0
Cre17.g731850 Chlamydomonas reinhardtii HOM05D003489 ORTHO05D004109 1.9e-16 89.4 99 47.5
Thecc.08G124400 Theobroma cacao HOM05D003489 ORTHO05D004109 1.6e-15 86.3 71 64.8
PSO673G0003 Papaver somniferum HOM05D003489 ORTHO05D004109 2.1e-15 85.9 60 68.3
CSS0006688 Camellia sinensis var. sinensis HOM05D003489 ORTHO05D004109 3.9e-14 81.6 99 47.5
Nitab4.5_0006109g0040 Nicotiana tabacum HOM05D003489 ORTHO05D004109 1.1e-11 73.6 44 79.5
TAR375G0977 Trochodendron aralioides HOM05D003489 ORTHO05D004109 7.6e-10 67.4 39 79.5
CANSAT80G1187 Cannabis sativa HOM05D003489 ORTHO05D004109 1.2e-07 60.1 39 66.7
Cfa024890 Carpinus fangiana HOM05D003489 ORTHO05D121620 6.6e-06 54.3 106 32.1


User provided reference genes

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