Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G30.21 Capsicum annuum HOM05D000038 ORTHO05D115232 1.4e-26 124.0 60 100.0
CAN.G913.6 Capsicum annuum HOM05D000038 ORTHO05D000143 3.2e-15 86.3 59 72.9
Sopen03g021160 Solanum pennellii HOM05D000038 ORTHO05D000143 4.6e-14 82.4 59 71.2
PGSC0003DMG400018452 Solanum tuberosum HOM05D000038 ORTHO05D000143 4.6e-14 82.4 59 71.2
Solyc03g078370.1 Solanum lycopersicum HOM05D000038 ORTHO05D000143 1.8e-13 80.5 59 69.5
Peaxi162Scf00583g00232 Petunia axillaris HOM05D000038 ORTHO05D000143 8.7e-13 78.2 59 67.8
Nitab4.5_0005285g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000143 3.3e-12 76.3 59 67.8
Nitab4.5_0001438g0020 Nicotiana tabacum HOM05D000038 ORTHO05D000143 9.6e-12 74.7 59 64.4
Haze_16388 Corylus avellana HOM05D000038 ORTHO05D000143 1.3e-08 64.3 58 51.7
Cc07_g17570 Coffea canephora HOM05D000038 ORTHO05D000143 3.8e-08 62.8 54 51.9
Haze_25154 Corylus avellana HOM05D000038 ORTHO05D000143 8.4e-08 61.6 58 50.0
QL06p039257 Quercus lobata HOM05D000038 ORTHO05D000143 8.4e-08 61.6 58 46.6
Haze_06146 Corylus avellana HOM05D000038 ORTHO05D000143 1.9e-07 60.5 58 50.0
Haze_25167 Corylus avellana HOM05D000038 ORTHO05D000143 1.9e-07 60.5 58 50.0
Haze_25161 Corylus avellana HOM05D000038 ORTHO05D000143 3.2e-07 59.7 58 48.3
Haze_25156 Corylus avellana HOM05D000038 ORTHO05D000143 4.2e-07 59.3 57 47.4
QL06p039202 Quercus lobata HOM05D000038 ORTHO05D000143 4.2e-07 59.3 58 44.8
Thecc.01G123700 Theobroma cacao HOM05D000038 ORTHO05D000143 4.2e-07 59.3 58 50.0
Prupe.6G165500 Prunus persica HOM05D000038 ORTHO05D000143 5.5e-07 58.9 57 52.6
Cfa002858 Carpinus fangiana HOM05D000038 ORTHO05D000143 7.1e-07 58.5 58 46.6
Haze_21747 Corylus avellana HOM05D000038 ORTHO05D000143 7.1e-07 58.5 57 47.4
Gohir.A05G387300 Gossypium hirsutum HOM05D000038 ORTHO05D000143 1.2e-06 57.8 58 50.0
Gohir.D04G028901 Gossypium hirsutum HOM05D000038 ORTHO05D000143 1.2e-06 57.8 58 50.0
Gorai.012G031600 Gossypium raimondii HOM05D000038 ORTHO05D000143 1.2e-06 57.8 58 50.0
Prupe.6G165300 Prunus persica HOM05D000038 ORTHO05D000143 1.2e-06 57.8 57 50.9
Gohir.A05G387600 Gossypium hirsutum HOM05D000038 ORTHO05D000143 1.6e-06 57.4 58 48.3
Gohir.A05G387900 Gossypium hirsutum HOM05D000038 ORTHO05D000143 1.6e-06 57.4 58 48.3
Nn5g28689 Nelumbo nucifera HOM05D000038 ORTHO05D000143 1.6e-06 57.4 55 47.3
CiPaw.04G085500 Carya illinoinensis HOM05D000038 ORTHO05D000143 2.1e-06 57.0 57 47.4
Ciclev10024921m.g Citrus clementina HOM05D000038 ORTHO05D000143 2.7e-06 56.6 57 49.1
QL01p031994 Quercus lobata HOM05D000038 ORTHO05D000143 2.7e-06 56.6 54 46.3
CiPaw.04G085300 Carya illinoinensis HOM05D000038 ORTHO05D000143 3.5e-06 56.2 54 48.1
CiPaw.04G085600 Carya illinoinensis HOM05D000038 ORTHO05D000143 3.5e-06 56.2 54 48.1
Gohir.D04G030700 Gossypium hirsutum HOM05D000038 ORTHO05D000143 3.5e-06 56.2 58 48.3
QL06p034915 Quercus lobata HOM05D000038 ORTHO05D000143 3.5e-06 56.2 54 48.1
TAR628G1163 Trochodendron aralioides HOM05D000038 ORTHO05D000143 3.5e-06 56.2 54 50.0
CANSAT01G1260 Cannabis sativa HOM05D000038 ORTHO05D000143 4.6e-06 55.8 54 48.1
Cc07_g17480 Coffea canephora HOM05D000038 ORTHO05D000143 4.6e-06 55.8 54 46.3
Eucgr.H04925 Eucalyptus grandis HOM05D000038 ORTHO05D000143 4.6e-06 55.8 53 45.3
CiPaw.15G018700 Carya illinoinensis HOM05D000038 ORTHO05D000143 6.0e-06 55.5 53 52.8
Duzib187G0906 Durio zibethinus HOM05D000038 ORTHO05D000143 6.0e-06 55.5 57 47.4
QL10p007510 Quercus lobata HOM05D000038 ORTHO05D000143 6.0e-06 55.5 54 46.3
RcHm_v2.0_Chr2g0118771 Rosa chinensis HOM05D000038 ORTHO05D000143 6.0e-06 55.5 56 50.0
Haze_05741 Corylus avellana HOM05D000038 ORTHO05D000143 7.9e-06 55.1 56 48.2
Haze_17708 Corylus avellana HOM05D000038 ORTHO05D000143 7.9e-06 55.1 47 53.2
Duzib187G0367 Durio zibethinus HOM05D000038 ORTHO05D000143 7.9e-06 55.1 57 47.4
Gorai.012G032700 Gossypium raimondii HOM05D000038 ORTHO05D000143 7.9e-06 55.1 53 47.2


User provided reference genes

Program Settings