Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G3.43 Capsicum annuum HOM05D004875 ORTHO05D005598 4.8e-188 661.0 331 100.0
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 7.3e-160 567.4 331 86.1
Solyc09g057920.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 6.8e-158 560.8 331 85.2
Peaxi162Scf00055g00107 Petunia axillaris HOM05D004875 ORTHO05D005598 3.7e-148 528.5 331 79.8
Nitab4.5_0005130g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 1.7e-140 503.1 317 82.3
Nitab4.5_0000002g0020 Nicotiana tabacum HOM05D004875 ORTHO05D005598 7.1e-139 497.7 316 80.7
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 7.6e-101 371.3 335 58.5
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 3.0e-97 359.4 335 54.6
Oeu027574.2 Olea europaea HOM05D004875 ORTHO05D005598 6.7e-97 358.2 335 54.9
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 1.1e-96 357.5 337 54.9
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 2.5e-96 356.3 333 55.6
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 4.1e-94 349.0 334 54.5
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.5e-93 347.1 321 58.3
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.0e-92 344.4 333 53.8
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 2.2e-92 343.2 330 54.5
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 2.9e-92 342.8 334 53.9
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 1.9e-91 340.1 332 52.4
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 1.2e-90 337.4 312 55.4
Cpa.g.sc2.356 Carica papaya HOM05D004875 ORTHO05D005598 4.3e-88 328.9 335 52.5
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 1.3e-87 327.4 334 51.8
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.1e-86 324.3 332 51.5
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 1.4e-86 323.9 317 54.6
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 5.3e-86 322.0 334 50.9
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 6.9e-86 321.6 333 50.5
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 1.2e-85 320.9 336 50.0
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 4.5e-85 318.9 334 51.2
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 2.9e-84 316.2 336 49.1
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 6.5e-84 315.1 333 49.8
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 1.1e-83 314.3 332 49.1
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 1.4e-83 313.9 333 49.2
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 1.9e-83 313.5 332 49.4
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 3.2e-83 312.8 333 51.1
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 9.4e-83 311.2 331 48.9
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 3.6e-82 309.3 334 49.4
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 6.1e-82 308.5 328 50.9
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 4.4e-80 302.4 333 48.0
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 7.4e-80 301.6 334 48.5
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.3e-79 300.8 333 47.1
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.8e-79 299.7 333 46.8
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 4.8e-79 298.9 333 46.8
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 4.8e-79 298.9 328 45.4
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 3.1e-78 296.2 331 48.0
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 4.1e-78 295.8 331 47.4
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 7.0e-78 295.0 330 48.2
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.0e-76 291.2 319 47.3
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.0e-76 291.2 332 46.7
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 3.8e-76 289.3 314 48.4
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 8.5e-76 288.1 331 47.4
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.9e-75 287.0 319 46.7
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 7.2e-75 285.0 333 46.5
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 1.2e-74 284.3 332 45.5
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 1.2e-74 284.3 319 46.1
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 4.7e-74 282.3 319 45.5
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 5.2e-73 278.9 333 44.7
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 5.2e-73 278.9 333 46.5
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 5.7e-72 275.4 328 47.0
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 4.8e-71 272.3 334 45.2
Ca_15009_v3 Cicer arietinum L. HOM05D004875 ORTHO05D005598 6.3e-71 271.9 331 45.9
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.1e-70 271.2 333 44.1
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 5.3e-70 268.9 321 46.4
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 9.1e-70 268.1 333 44.4
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.2e-69 267.7 334 42.5
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 4.5e-69 265.8 330 46.1
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 5.9e-69 265.4 333 43.8
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 5.9e-69 265.4 333 44.4
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 1.7e-68 263.8 335 45.1
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 6.5e-68 261.9 329 43.5
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 8.5e-68 261.5 330 43.0
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.6e-66 257.3 336 40.2
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 2.1e-66 256.9 334 41.6
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 3.6e-66 256.1 333 40.8
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 4.7e-66 255.8 333 42.9
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 1.8e-65 253.8 333 40.8
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 1.8e-65 253.8 334 41.6
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 3.0e-65 253.1 334 42.2
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 6.8e-65 251.9 333 42.3
MELO3C025696.2 Cucumis melo HOM05D004875 ORTHO05D005598 8.8e-65 251.5 313 44.1
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 3.4e-64 249.6 334 41.9
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 9.8e-64 248.1 335 40.6
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 3.7e-63 246.1 334 41.0
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 1.8e-62 243.8 332 40.4
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 2.4e-62 243.4 331 40.2
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 2.4e-62 243.4 331 40.2
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 2.4e-62 243.4 323 42.1
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 9.1e-62 241.5 331 40.5
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 1.2e-61 241.1 331 40.5
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 1.2e-61 241.1 331 40.2
SHI19214 Sapria himalayana HOM05D004875 ORTHO05D005598 2.0e-61 240.4 320 41.9
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 7.7e-61 238.4 333 39.6
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 7.7e-61 238.4 337 40.7
unitig_0.g437 Utricularia gibba HOM05D004875 ORTHO05D005598 1.2e-56 224.6 327 41.6
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 9.8e-56 221.5 314 36.9
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 1.3e-55 221.1 336 38.1
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 8.3e-55 218.4 311 39.9
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.2e-53 214.5 287 40.1
Zm00001eb286340 Zea mays HOM05D004875 ORTHO05D005598 1.3e-52 211.1 314 35.0
Atru.chr3.4119 Acer truncatum HOM05D004875 ORTHO05D005598 1.7e-52 210.7 203 53.2
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 1.6e-50 204.1 289 41.5
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 1.6e-45 187.6 314 35.0
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 3.2e-38 163.3 325 35.4
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 3.2e-38 163.3 329 35.0
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 1.2e-32 144.8 356 30.9
Lsat_1_v5_gn_9_14740 Lactuca sativa HOM05D000378 ORTHO05D005598 1.1e-25 121.7 191 40.8
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 4.1e-22 109.8 116 47.4
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.1e-18 97.4 101 50.5
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 6.2e-18 95.9 101 50.5
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 9.9e-16 88.6 355 25.6
BcaB03g16392 Brassica carinata HOM05D004875 ORTHO05D005598 4.3e-11 73.2 162 29.0
PSO170G5101 Papaver somniferum HOM05D004875 ORTHO05D005598 2.2e-07 60.8 285 23.5
BcaB06g26910 Brassica carinata HOM05D000375 ORTHO05D000240 5.4e-06 56.2 120 31.7


User provided reference genes

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