Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G3.37 Capsicum annuum HOM05D006922 ORTHO05D008564 1.7e-140 502.7 252 100.0
Sopen09g014130 Solanum pennellii HOM05D006922 ORTHO05D008564 2.9e-60 236.1 263 55.5
Solyc09g031610.4 Solanum lycopersicum HOM05D006922 ORTHO05D008564 8.5e-60 234.6 263 55.1
PGSC0003DMG400022078 Solanum tuberosum HOM05D006922 ORTHO05D008564 1.8e-54 216.9 142 80.3
Nitab4.5_0006472g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 7.0e-54 214.9 267 51.3
Peaxi162Scf00116g00214 Petunia axillaris HOM05D006922 ORTHO05D008564 9.1e-54 214.5 260 51.2
Prupe.6G058000 Prunus persica HOM05D006922 ORTHO05D008564 2.3e-49 199.9 190 57.4
Nitab4.5_0021689g0010 Nicotiana tabacum HOM05D006922 ORTHO05D008564 4.4e-48 195.7 338 41.1
Dinv14441 Davidia involucrata HOM05D006922 ORTHO05D008564 5.3e-46 188.7 230 49.6
TAR636G2664 Trochodendron aralioides HOM05D006922 ORTHO05D008564 8.5e-44 181.4 263 42.2
Cc01_g14160 Coffea canephora HOM05D006922 ORTHO05D008564 2.5e-43 179.9 251 44.6
CiPaw.13G078100 Carya illinoinensis HOM05D006922 ORTHO05D008564 7.2e-43 178.3 251 43.0
CSS0043924 Camellia sinensis var. sinensis HOM05D006922 ORTHO05D008564 1.6e-42 177.2 262 44.3
GSVIVG01024745001 Vitis vinifera HOM05D006922 ORTHO05D008564 4.7e-42 175.6 255 43.9
Manes.02G119900 Manihot esculenta HOM05D006922 ORTHO05D008564 1.0e-41 174.5 268 41.4
MD11G1075200 Malus domestica HOM05D006922 ORTHO05D008564 1.8e-41 173.7 267 41.9
Rhsim13G0069900 Rhododendron simsii HOM05D006922 ORTHO05D008564 1.8e-41 173.7 259 41.7
vmacro02966 Vaccinium macrocarpon HOM05D006922 ORTHO05D008564 2.3e-41 173.3 233 45.1
Nn2g13696 Nelumbo nucifera HOM05D006922 ORTHO05D008564 5.2e-41 172.2 257 40.5
QL01p038111 Quercus lobata HOM05D006922 ORTHO05D008564 1.2e-40 171.0 263 41.4
SGA_v2.0_scaffold146G36139 Striga asiatica HOM05D006922 ORTHO05D008564 1.2e-40 171.0 268 41.8
Potri.001G251000 Populus trichocarpa HOM05D006922 ORTHO05D008564 1.5e-40 170.6 267 40.8
Aqoxy4G02590 Aquilegia oxysepala HOM05D006922 ORTHO05D008564 3.4e-40 169.5 267 40.1
PSO339G4985 Papaver somniferum HOM05D006922 ORTHO05D008564 3.4e-40 169.5 238 43.3
Phvul.008G261700 Phaseolus vulgaris HOM05D006922 ORTHO05D008564 4.4e-40 169.1 259 41.7
MSTRG.17876 Avicennia marina HOM05D006922 ORTHO05D008564 5.7e-40 168.7 266 41.0
Atru.chr3.4225 Acer truncatum HOM05D006922 ORTHO05D008564 7.5e-40 168.3 237 42.2
FAN16G0983 Fragaria x ananassa HOM05D006922 ORTHO05D008564 7.5e-40 168.3 281 41.3
VMungo1080G0717 Vigna mungo HOM05D006922 ORTHO05D008564 7.5e-40 168.3 259 40.5
FAN25G0993 Fragaria x ananassa HOM05D006922 ORTHO05D008564 1.3e-39 167.5 264 42.0
Migut.N00796 Erythranthe guttata HOM05D006922 ORTHO05D008564 1.7e-39 167.2 263 42.2
PSO384G3055 Papaver somniferum HOM05D006922 ORTHO05D008564 1.7e-39 167.2 238 42.9
VMungo0647G1020 Vigna mungo HOM05D006922 ORTHO05D008564 1.7e-39 167.2 259 40.5
AUR62020125 Chenopodium quinoa HOM05D006922 ORTHO05D008564 2.2e-39 166.8 244 43.9
Ah.08g221140 Amaranthus hybridus HOM05D006922 ORTHO05D008564 2.8e-39 166.4 255 43.1
FAN11G1737 Fragaria x ananassa HOM05D006922 ORTHO05D008564 3.7e-39 166.0 262 41.6
CANSAT54G2041 Cannabis sativa HOM05D006922 ORTHO05D008564 6.3e-39 165.2 255 42.4
EL10Ac7g16162 Beta vulgaris HOM05D006922 ORTHO05D008564 8.3e-39 164.9 243 43.2
TWI75G0327 Tripterygium wilfordii HOM05D006922 ORTHO05D008564 8.3e-39 164.9 256 39.8
Eucgr.B02258 Eucalyptus grandis HOM05D006922 ORTHO05D008564 1.1e-38 164.5 259 42.5
PGR102G2313 Punica granatum HOM05D006922 ORTHO05D008564 1.1e-38 164.5 263 41.1
AUR62001652 Chenopodium quinoa HOM05D006922 ORTHO05D008564 1.8e-38 163.7 258 41.5
FvH4_3g38500 Fragaria vesca HOM05D006922 ORTHO05D008564 1.8e-38 163.7 262 41.2
arahy.Tifrunner.gnm1.ann1.TP1S59 Arachis hypogaea HOM05D006922 ORTHO05D008564 3.1e-38 162.9 254 40.6
CDE04G0365 Ceratophyllum demersum HOM05D006922 ORTHO05D008564 3.1e-38 162.9 259 40.9
Cfa011691 Carpinus fangiana HOM05D006922 ORTHO05D008564 4.1e-38 162.5 267 39.7
Ciclev10028135m.g Citrus clementina HOM05D006922 ORTHO05D008564 4.1e-38 162.5 256 39.5
Glyma.14G193200 Glycine max HOM05D006922 ORTHO05D008564 4.1e-38 162.5 261 41.0
Haze_24310 Corylus avellana HOM05D006922 ORTHO05D008564 5.4e-38 162.2 263 39.2
Haze_24317 Corylus avellana HOM05D006922 ORTHO05D008564 5.4e-38 162.2 263 39.2
HanXRQChr01g0011191 Helianthus annuus HOM05D006922 ORTHO05D008564 7.0e-38 161.8 237 43.0
Actinidia25162 Actinidia chinensis HOM05D006922 ORTHO05D008564 9.1e-38 161.4 226 42.5
Cpa.g.sc112.28 Carica papaya HOM05D006922 ORTHO05D008564 9.1e-38 161.4 260 38.8
Glyma.02G226300 Glycine max HOM05D006922 ORTHO05D008564 1.2e-37 161.0 261 41.0
arahy.Tifrunner.gnm1.ann1.GN6H4S Arachis hypogaea HOM05D006922 ORTHO05D008564 1.6e-37 160.6 267 40.4
Lalb_Chr17g0345061 Lupinus albus HOM05D006922 ORTHO05D008564 2.0e-37 160.2 247 42.5
ECA248G0600 Erigeron canadensis HOM05D006922 ORTHO05D008564 3.5e-37 159.5 233 44.2
Medtr5g070310 Medicago truncatula HOM05D006922 ORTHO05D008564 3.5e-37 159.5 244 39.8
Sed0026257 Sechium edule HOM05D006922 ORTHO05D008564 1.7e-36 157.1 252 40.9
Hund18850 Selenicereus undatus HOM05D006922 ORTHO05D008564 2.3e-36 156.8 250 40.8
LjContig00155g0013001 Lotus japonicus HOM05D006922 ORTHO05D008564 2.9e-36 156.4 243 39.9
TPR.G5774 Trifolium pratense HOM05D006922 ORTHO05D008564 5.0e-36 155.6 250 38.8
A02p07550 Brassica napus HOM05D006922 ORTHO05D008564 8.6e-36 154.8 254 38.6
BraA02t05832Z Brassica rapa HOM05D006922 ORTHO05D008564 8.6e-36 154.8 254 38.6
Gohir.D13G229600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 8.6e-36 154.8 254 40.6
MELO3C025853.2 Cucumis melo HOM05D006922 ORTHO05D008564 2.5e-35 153.3 221 42.1
ATR0618G165 Amborella trichopoda HOM05D006922 ORTHO05D008564 4.2e-35 152.5 262 38.5
Lsat_1_v5_gn_5_171361 Lactuca sativa HOM05D006922 ORTHO05D008564 5.5e-35 152.1 222 42.8
CsaV3_6G016240 Cucumis sativus L. HOM05D006922 ORTHO05D008564 7.2e-35 151.8 222 42.3
RcHm_v2.0_Chr5g0069361 Rosa chinensis HOM05D006922 ORTHO05D008564 7.2e-35 151.8 263 39.9
Thecc.09G302300 Theobroma cacao HOM05D006922 ORTHO05D008564 9.5e-35 151.4 262 38.5
Duzib170G0653 Durio zibethinus HOM05D006922 ORTHO05D008564 1.2e-34 151.0 256 39.5
ClCG02G019570 Citrullus lanatus HOM05D006922 ORTHO05D008564 1.6e-34 150.6 222 41.9
FAN21G2294 Fragaria x ananassa HOM05D006922 ORTHO05D008564 1.6e-34 150.6 254 40.6
Ca_05595_v3 Cicer arietinum L. HOM05D006922 ORTHO05D008564 2.8e-34 149.8 222 41.4
Gohir.A13G224600 Gossypium hirsutum HOM05D006922 ORTHO05D008564 4.7e-34 149.1 233 41.2
Gorai.013G260300 Gossypium raimondii HOM05D006922 ORTHO05D008564 6.1e-34 148.7 214 42.5
Sabra16G0152600 Salix brachista HOM05D006922 ORTHO05D008564 6.1e-34 148.7 214 43.0
Psat2g058840 Pisum sativum HOM05D006922 ORTHO05D008564 1.8e-33 147.1 222 40.1
unitig_0.g440 Utricularia gibba HOM05D006922 ORTHO05D008564 1.8e-33 147.1 237 38.8
Sp6g20450 Schrenkiella parvula HOM05D006922 ORTHO05D008564 3.0e-33 146.4 261 36.8
BcaC03g14075 Brassica carinata HOM05D006922 ORTHO05D008564 6.8e-33 145.2 197 43.1
C02p13110 Brassica napus HOM05D006922 ORTHO05D008564 6.8e-33 145.2 197 43.1
BolC2t07428H Brassica oleracea HOM05D006922 ORTHO05D008564 6.8e-33 145.2 197 43.1
BcaB05g22449 Brassica carinata HOM05D006922 ORTHO05D008564 8.9e-33 144.8 197 43.1
Aa31LG11G520 Aethionema arabicum HOM05D006922 ORTHO05D008564 2.6e-32 143.3 254 36.2
AL8G35040 Arabidopsis lyrata HOM05D006922 ORTHO05D008564 1.7e-31 140.6 194 42.3
Thhalv10013126m.g Eutrema salsugineum HOM05D006922 ORTHO05D008564 1.7e-31 140.6 265 36.6
Carub.0008s1938 Capsella rubella HOM05D006922 ORTHO05D008564 2.2e-31 140.2 197 41.1
AT5G58760 Arabidopsis thaliana HOM05D006922 ORTHO05D008564 6.3e-31 138.7 194 41.2
HPP92_019886 Vanilla planifolia HOM05D006922 ORTHO05D008564 6.3e-31 138.7 252 38.5
Lj2A1081T41 Lonicera japonica HOM05D006922 ORTHO05D008564 1.1e-30 137.9 189 43.9
CARHR272670 Cardamine hirsuta HOM05D006922 ORTHO05D008564 1.4e-30 137.5 197 41.6
THA.LOC104814912 Tarenaya hassleriana HOM05D006922 ORTHO05D008564 1.4e-30 137.5 210 39.0
DCAR_007371 Daucus carota HOM05D006922 ORTHO05D008564 5.4e-30 135.6 224 38.8
Sc12g0000700 Simmondsia chinensis HOM05D006922 ORTHO05D008564 7.8e-29 131.7 182 44.0
Os01g0141700 Oryza sativa ssp. japonica HOM05D006922 ORTHO05D008564 3.3e-27 126.3 200 38.0
Oeu056142.1 Olea europaea HOM05D006922 ORTHO05D008564 9.5e-27 124.8 194 40.7
Pp3c8_16660 Physcomitrium patens HOM05D006922 ORTHO05D008564 3.6e-26 122.9 199 34.7
SHI19141 Sapria himalayana HOM05D006922 ORTHO05D008564 3.6e-26 122.9 257 33.9
COL.COLO4_19151 Corchorus olitorius HOM05D006922 ORTHO05D008564 1.0e-25 121.3 81 71.6
SMO200G0225 Selaginella moellendorffii HOM05D006922 ORTHO05D008564 1.4e-25 120.9 257 33.5
AagrBONN_evm.TU.Sc2ySwM_344.796 Anthoceros agrestis HOM05D006922 ORTHO05D008564 4.0e-25 119.4 195 35.4
Zm00001eb335650 Zea mays HOM05D006922 ORTHO05D008564 2.0e-24 117.1 206 34.5
CBR_g22343 Chara braunii HOM05D006922 ORTHO05D008564 4.1e-22 109.4 207 35.7
Zm00001eb098530 Zea mays HOM05D008428 ORTHO05D010743 4.1e-22 109.4 102 53.9
Zm00001eb204440 Zea mays HOM05D008428 ORTHO05D010743 1.6e-21 107.5 99 53.5
Zm00001eb302770 Zea mays HOM05D008428 ORTHO05D010743 1.3e-20 104.4 99 52.5
HPP92_019877 Vanilla planifolia HOM05D006922 ORTHO05D008564 8.0e-18 95.1 244 32.4
Cre13.g577550 Chlamydomonas reinhardtii HOM05D006922 ORTHO05D008564 4.4e-16 89.4 84 47.6
CDE02G4620 Ceratophyllum demersum HOM05D006922 ORTHO05D008564 7.5e-16 88.6 132 43.2
Actinidia23246 Actinidia chinensis HOM05D006922 ORTHO05D008564 3.7e-07 59.7 40 67.5
Actinidia16091 Actinidia chinensis HOM05D006922 ORTHO05D008564 6.4e-07 58.9 34 73.5
Actinidia14201 Actinidia chinensis HOM05D000103 ORTHO05D000049 8.3e-07 58.5 63 49.2


User provided reference genes

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