Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G298.47 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-66 253.8 122 100.0
CAN.G1801.7 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-31 139.0 87 70.1
CAN.G308.46 Capsicum annuum HOM05D000679 ORTHO05D000137 9.9e-30 133.7 87 66.7
CAN.G649.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-29 132.9 86 67.4
CAN.G1282.6 Capsicum annuum HOM05D000679 ORTHO05D000137 4.2e-28 128.3 105 59.0
CAN.G321.49 Capsicum annuum HOM05D000679 ORTHO05D000137 3.0e-26 122.1 74 73.0
CAN.G697.14 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-23 113.2 74 66.2
CAN.G1045.41 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-23 112.5 87 59.8
CAN.G522.6 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-20 103.6 66 68.2
CAN.G403.10 Capsicum annuum HOM05D000679 ORTHO05D000137 7.1e-20 100.9 67 65.7
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 7.1e-20 100.9 87 55.2
CAN.G411.55 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-18 94.4 70 60.0
CAN.G132.23 Capsicum annuum HOM05D000679 ORTHO05D000137 4.8e-16 88.2 54 72.2
CAN.G170.81 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-15 86.7 52 73.1
CAN.G65.146 Capsicum annuum HOM05D002676 ORTHO05D003194 3.1e-15 85.5 52 69.2
PGSC0003DMG400025964 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.9e-15 84.3 95 42.1
CAN.G1037.8 Capsicum annuum HOM05D000679 ORTHO05D000137 9.0e-15 84.0 52 65.4
PGSC0003DMG400034380 Solanum tuberosum HOM05D011278 ORTHO05D000137 5.4e-12 74.7 80 41.2
Sopen05g026050 Solanum pennellii HOM05D000679 ORTHO05D000137 9.3e-12 73.9 77 45.5
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 4.6e-11 71.6 51 56.9
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 4.6e-11 71.6 77 42.9
Sopen01g028110 Solanum pennellii HOM05D000679 ORTHO05D000137 4.6e-11 71.6 77 44.2
PGSC0003DMG400023044 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.0e-11 71.2 82 37.8
Sopen09g025660 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-10 70.1 77 42.9
Sopen12g023980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.3e-10 70.1 82 41.5
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.9e-10 68.6 126 31.7
Sopen07g015500 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-10 68.6 77 42.9
Sopen11g013410 Solanum pennellii HOM05D000679 ORTHO05D000137 3.9e-10 68.6 77 42.9
PGSC0003DMG400043944 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.9e-10 68.6 82 37.8
Sopen07g013180 Solanum pennellii HOM05D000679 ORTHO05D000137 5.1e-10 68.2 77 42.9
Sopen04g032900 Solanum pennellii HOM05D000679 ORTHO05D000137 8.7e-10 67.4 77 41.6
Sopen05g008010 Solanum pennellii HOM05D000679 ORTHO05D000137 8.7e-10 67.4 77 41.6
Sopen05g008210 Solanum pennellii HOM05D000679 ORTHO05D000137 8.7e-10 67.4 78 42.3
Sopen06g005670 Solanum pennellii HOM05D000679 ORTHO05D000137 8.7e-10 67.4 77 41.6
Sopen09g012220 Solanum pennellii HOM05D000679 ORTHO05D000137 8.7e-10 67.4 77 41.6
Nitab4.5_0006099g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-09 66.6 80 42.5
PGSC0003DMG400037689 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.9e-09 66.2 82 36.6
Nitab4.5_0015150g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.5e-09 65.9 86 40.7
Sopen03g024750 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-09 65.9 77 41.6
PGSC0003DMG400003239 Solanum tuberosum HOM05D011278 ORTHO05D014267 2.5e-09 65.9 76 39.5
Nitab4.5_0011716g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.3e-09 65.5 119 33.6
Sopen08g005460 Solanum pennellii HOM05D000679 ORTHO05D000137 4.3e-09 65.1 76 40.8
Nitab4.5_0003533g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.6e-09 64.7 78 41.0
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.4e-09 64.3 78 38.5
Nitab4.5_0008756g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.4e-09 64.3 124 31.5
Nitab4.5_0000044g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.6e-09 63.9 80 40.0
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-08 63.5 85 40.0
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-08 63.5 86 39.5
Nitab4.5_0009017g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-08 63.2 78 39.7
Nitab4.5_0010319g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-08 63.2 78 39.7
Nitab4.5_0000159g0140 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-08 62.4 86 39.5
Nitab4.5_0000379g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-08 62.4 79 44.3
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-08 62.4 79 40.5
Nitab4.5_0000207g0350 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-08 62.0 76 40.8
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-08 62.0 75 40.0
Nitab4.5_0000725g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.7e-08 62.0 85 37.6
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.8e-08 61.6 78 39.7
Nitab4.5_0007537g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.8e-08 61.6 79 43.0
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.2e-08 61.2 83 38.6
PGSC0003DMG400037778 Solanum tuberosum HOM05D011278 ORTHO05D000137 6.2e-08 61.2 80 37.5
Nitab4.5_0004200g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000137 8.1e-08 60.8 79 41.8
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 1.1e-07 60.5 102 32.4
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-07 60.5 86 37.2
Nitab4.5_0001504g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-07 60.1 79 41.8
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-07 60.1 86 38.4
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 1.8e-07 59.7 93 36.6
Nitab4.5_0007636g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.8e-07 59.7 79 39.2
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 2.4e-07 59.3 82 37.8
CAN.G1139.12 Capsicum annuum HOM05D009195 ORTHO05D000137 3.1e-07 58.9 93 33.3
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.1e-07 58.9 123 30.1
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.1e-07 58.9 75 41.3
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.0e-07 58.5 76 42.1
Nitab4.5_0002461g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.3e-07 58.2 75 38.7
Nitab4.5_0000095g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-06 57.0 79 40.5
Nitab4.5_0000980g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-06 57.0 77 36.4
Nitab4.5_0004143g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-06 57.0 78 37.2
Nitab4.5_0002755g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-06 56.6 78 37.2
Peaxi162Scf00048g01514 Petunia axillaris HOM05D010453 ORTHO05D012004 1.5e-06 56.6 86 34.9
Nitab4.5_0004557g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.0e-06 56.2 78 41.0
Solyc08g150114.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 2.0e-06 56.2 61 47.5
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 2.0e-06 56.2 77 37.7
CAN.G27.26 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-06 55.8 95 32.6
Nitab4.5_0001057g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.6e-06 55.8 77 40.3
Sopen11g022990 Solanum pennellii HOM05D000004 ORTHO05D000137 3.4e-06 55.5 60 46.7
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 3.4e-06 55.5 77 37.7
Nitab4.5_0000853g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.5e-06 55.1 72 41.7
Nitab4.5_0002495g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.5e-06 55.1 78 37.2
Solyc08g066625.1 Solanum lycopersicum HOM05D009268 ORTHO05D011733 5.8e-06 54.7 61 45.9
Solyc09g061400.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 5.8e-06 54.7 61 45.9
Sopen01g020370 Solanum pennellii HOM05D009268 ORTHO05D011733 5.8e-06 54.7 61 45.9
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 5.8e-06 54.7 61 44.3
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 5.8e-06 54.7 61 44.3
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 5.8e-06 54.7 61 44.3
Sopen07g008740 Solanum pennellii HOM05D007732 ORTHO05D010105 7.6e-06 54.3 89 33.7
Sopen10g014500 Solanum pennellii HOM05D000541 ORTHO05D010105 7.6e-06 54.3 78 37.2
CAN.G1621.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-05 53.9 82 35.4
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.0e-05 53.9 77 35.1


User provided reference genes

Program Settings