Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 2.0e-62 242.3 121 100.0
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 1.1e-17 93.6 130 46.9
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 2.2e-13 79.3 127 38.6
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 2.2e-13 79.3 127 38.6
Solyc07g047827.1 Solanum lycopersicum HOM05D037802 ORTHO05D004423 2.2e-13 79.3 125 44.0
Sopen07g024260 Solanum pennellii HOM05D037802 ORTHO05D004423 8.3e-13 77.4 112 44.6
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 2.4e-12 75.9 128 42.2
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 3.2e-12 75.5 134 39.6
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 5.4e-12 74.7 133 42.1
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 9.2e-12 73.9 133 42.1
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 1.2e-11 73.6 133 38.3
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 2.1e-11 72.8 124 40.3
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 3.5e-11 72.0 128 39.1
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 3.5e-11 72.0 130 40.8
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.6e-11 71.6 122 41.8
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 4.6e-11 71.6 133 39.8
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 4.6e-11 71.6 128 42.2
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 1.3e-10 70.1 129 41.1
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 3.0e-10 68.9 128 38.3
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 8.6e-10 67.4 140 37.9
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.9e-09 66.2 131 38.2
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 2.5e-09 65.9 128 39.1
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.3e-09 65.5 130 36.2
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 3.3e-09 65.5 126 38.9
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 3.3e-09 65.5 126 38.9
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 7.3e-09 64.3 130 40.0
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 7.3e-09 64.3 134 38.8
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 9.5e-09 63.9 137 36.5
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 1.2e-08 63.5 149 37.6
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 1.2e-08 63.5 125 42.4
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 1.2e-08 63.5 125 42.4
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.6e-08 63.2 129 38.0
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.1e-08 62.8 130 39.2
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 2.1e-08 62.8 139 35.3
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 2.1e-08 62.8 126 39.7
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 3.6e-08 62.0 134 40.3
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.6e-08 62.0 131 39.7
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.6e-08 62.0 131 39.7
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 4.7e-08 61.6 129 34.1
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 4.7e-08 61.6 124 37.1
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 4.7e-08 61.6 124 43.5
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 6.2e-08 61.2 128 38.3
Actinidia21442 Actinidia chinensis HOM05D004793 ORTHO05D004423 1.1e-07 60.5 103 44.7
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.1e-07 60.5 138 34.8
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 1.1e-07 60.5 130 37.7
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.1e-07 60.5 132 37.1
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.8e-07 59.7 124 34.7
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-07 59.3 130 36.9
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 2.3e-07 59.3 130 36.9
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.3e-07 59.3 140 31.4
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 3.1e-07 58.9 141 36.9
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.1e-07 58.9 127 32.3
FAN21G3338 Fragaria x ananassa HOM05D017646 ORTHO05D004423 4.0e-07 58.5 126 36.5
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 5.2e-07 58.2 137 37.2
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 8.9e-07 57.4 139 33.8
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 8.9e-07 57.4 139 36.0
FvH4_3g24120 Fragaria vesca HOM05D017646 ORTHO05D004423 1.2e-06 57.0 126 35.7
FAN11G0385 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.2e-06 57.0 126 35.7
FAN25G0781 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.2e-06 57.0 126 35.7
FAN25G3449 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.2e-06 57.0 126 35.7
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 1.2e-06 57.0 129 37.2
FAN16G3200 Fragaria x ananassa HOM05D017646 ORTHO05D004423 1.5e-06 56.6 121 38.8
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 1.5e-06 56.6 135 34.8
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 1.5e-06 56.6 131 36.6
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 2.0e-06 56.2 125 36.8
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 2.6e-06 55.8 131 35.9
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 2.6e-06 55.8 131 35.9
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.4e-06 55.5 136 38.2
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.4e-06 55.1 132 35.6
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 4.4e-06 55.1 147 36.1
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 4.4e-06 55.1 137 36.5
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 4.4e-06 55.1 145 33.8
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 7.6e-06 54.3 134 36.6
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 7.6e-06 54.3 129 34.1
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 9.9e-06 53.9 141 32.6
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 9.9e-06 53.9 138 33.3
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 9.9e-06 53.9 145 32.4
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 9.9e-06 53.9 138 32.6
VMungo0540G1724 Vigna mungo HOM05D004793 ORTHO05D004423 9.9e-06 53.9 134 33.6


User provided reference genes

Program Settings