Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G294.17 Capsicum annuum HOM05D001579 ORTHO05D003470 3.9e-51 204.5 105 100.0
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 2.0e-07 59.3 31 80.6
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 2.0e-07 59.3 31 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 2.7e-07 58.9 31 80.6
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.7e-07 58.9 31 80.6
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.7e-07 58.9 31 80.6
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
SEGI_28257 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 80.6
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
vmacro11113 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 3.5e-07 58.5 31 77.4
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
CDE06G1318 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 4.5e-07 58.2 31 80.6
vmacro02105 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 4.5e-07 58.2 98 38.8
DCAR_006198 Daucus carota HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
Lj7A248G12 Lonicera japonica HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
Lj7C253T7 Lonicera japonica HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
SGA_v2.0_scaffold32G13167 Striga asiatica HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 5.9e-07 57.8 31 77.4
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 1.0e-06 57.0 31 74.2
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 74.2
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 74.2
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 74.2
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 77.4
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 74.2
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.3e-06 56.6 31 74.2
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 1.7e-06 56.2 32 71.9
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 1.7e-06 56.2 32 71.9
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 1.7e-06 56.2 32 71.9
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 1.7e-06 56.2 32 71.9
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 1.7e-06 56.2 32 71.9
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Cc00_g17000 Coffea canephora HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Lsat_1_v5_gn_2_67440 Lactuca sativa HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Lalb_Chr03g0025681 Lupinus albus HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 74.2
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 1.7e-06 56.2 31 77.4
ATR1101G101 Amborella trichopoda HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 77.4
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
CARHR112710 Cardamine hirsuta HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 77.4
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 74.2
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 77.4
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 77.4
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 2.3e-06 55.8 31 77.4
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
CiPaw.01G010000 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
CiPaw.01G010500 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
CiPaw.01G010800 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 2.9e-06 55.5 30 76.7
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 74.2
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
QL11p043604 Quercus lobata HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 2.9e-06 55.5 31 77.4
CSS0030455 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 3.8e-06 55.1 30 73.3
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 3.8e-06 55.1 31 71.0
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 3.8e-06 55.1 31 74.2
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 3.8e-06 55.1 31 74.2
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 3.8e-06 55.1 31 74.2
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 3.8e-06 55.1 31 71.0
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 5.0e-06 54.7 31 71.0
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 6.6e-06 54.3 31 71.0
CARHR112730 Cardamine hirsuta HOM05D001579 ORTHO05D003470 6.6e-06 54.3 31 71.0
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 6.6e-06 54.3 31 74.2
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 6.6e-06 54.3 31 74.2
SalBow6G2679 Salvia bowleyana HOM05D001579 ORTHO05D003470 6.6e-06 54.3 31 71.0


User provided reference genes

Program Settings