Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 3.1e-69 265.0 135 100.0
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.5e-42 176.4 132 73.5
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 3.6e-41 171.8 132 72.0
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 1.4e-40 169.9 132 71.2
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 8.4e-22 107.5 138 50.0
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 1.9e-18 96.3 149 45.6
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.3e-17 93.6 114 51.8
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 1.6e-17 93.2 117 48.7
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.1e-17 92.8 115 50.4
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 3.6e-17 92.0 88 56.8
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 8.1e-17 90.9 107 51.4
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.4e-16 90.1 136 43.4
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 3.1e-16 89.0 126 50.0
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 9.0e-16 87.4 118 48.3
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 9.0e-16 87.4 107 53.3
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 1.5e-15 86.7 112 50.9
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 3.4e-15 85.5 131 45.8
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 5.8e-15 84.7 138 44.2
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 7.6e-15 84.3 111 51.4
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.7e-14 83.2 110 51.8
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 2.2e-14 82.8 114 48.2
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 2.9e-14 82.4 90 54.4
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 4.9e-14 81.6 123 48.0
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 4.9e-14 81.6 88 55.7
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 6.4e-14 81.3 109 48.6
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.4e-13 80.1 109 48.6
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 1.4e-13 80.1 75 61.3
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.9e-13 79.7 109 48.6
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.9e-13 79.7 109 48.6
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 4.2e-13 78.6 110 46.4
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 2.1e-12 76.3 63 63.5
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.1e-12 76.3 97 52.6
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 2.7e-12 75.9 112 47.3
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 2.7e-12 75.9 111 48.6
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 3.5e-12 75.5 86 55.8
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.5e-12 75.5 92 54.3
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.5e-12 75.5 92 54.3
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 4.6e-12 75.1 106 47.2
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 4.6e-12 75.1 107 44.9
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 4.6e-12 75.1 105 42.9
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 1.0e-11 73.9 138 39.9
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 1.3e-11 73.6 77 55.8
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.8e-11 73.2 92 53.3
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.8e-11 73.2 65 61.5
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 3.9e-11 72.0 112 46.4
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 5.1e-11 71.6 103 50.5
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 5.1e-11 71.6 85 55.3
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 1.1e-10 70.5 128 42.2
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 1.5e-10 70.1 132 38.6
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 1.5e-10 70.1 126 41.3
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 1.9e-10 69.7 128 42.2
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 1.9e-10 69.7 131 34.4
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 2.5e-10 69.3 112 43.8
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 7.4e-10 67.8 143 33.6
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 7.4e-10 67.8 143 33.6
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 9.6e-10 67.4 116 44.8
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 9.6e-10 67.4 136 39.0
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 9.6e-10 67.4 94 45.7
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 9.6e-10 67.4 142 35.9
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.3e-09 67.0 142 31.7
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 1.6e-09 66.6 103 44.7
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.6e-09 66.6 142 35.2
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 1.6e-09 66.6 80 50.0
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 1.6e-09 66.6 79 48.1
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 2.1e-09 66.2 94 44.7
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 2.1e-09 66.2 94 43.6
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 2.8e-09 65.9 94 43.6
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 2.8e-09 65.9 111 40.5
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 3.7e-09 65.5 121 41.3
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 3.7e-09 65.5 132 41.7
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 4.8e-09 65.1 70 50.0
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 4.8e-09 65.1 86 47.7
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 4.8e-09 65.1 134 33.6
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 4.8e-09 65.1 116 37.9
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 4.8e-09 65.1 60 55.0
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 6.2e-09 64.7 97 39.2
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 6.2e-09 64.7 101 41.6
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 6.2e-09 64.7 101 41.6
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 6.2e-09 64.7 101 41.6
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 8.2e-09 64.3 83 50.6
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 8.2e-09 64.3 101 41.6
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 1.1e-08 63.9 91 44.0
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 1.1e-08 63.9 97 42.3
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 1.1e-08 63.9 135 34.1
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.4e-08 63.5 83 45.8
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 1.4e-08 63.5 83 45.8
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 1.4e-08 63.5 83 45.8
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 1.4e-08 63.5 101 39.6
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 1.8e-08 63.2 91 42.9
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 1.8e-08 63.2 89 46.1
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 2.4e-08 62.8 132 40.2
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 3.1e-08 62.4 91 44.0
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 3.1e-08 62.4 89 46.1
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 5.3e-08 61.6 60 53.3
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 9.0e-08 60.8 86 43.0
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 9.0e-08 60.8 86 41.9
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 9.0e-08 60.8 86 41.9
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 1.2e-07 60.5 86 44.2
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 1.2e-07 60.5 86 41.9
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 1.5e-07 60.1 77 48.1
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 1.5e-07 60.1 108 38.0
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 2.0e-07 59.7 103 39.8
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 2.0e-07 59.7 71 46.5
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 3.4e-07 58.9 83 45.8
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 3.4e-07 58.9 133 33.1
Sed0005978 Sechium edule HOM05D024969 ORTHO05D025069 3.4e-07 58.9 118 34.7
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 4.5e-07 58.5 140 35.0
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 4.5e-07 58.5 125 42.4
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 5.8e-07 58.2 137 35.8
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 1.0e-06 57.4 56 53.6
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.0e-06 57.4 120 32.5
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.3e-06 57.0 55 54.5
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 2.2e-06 56.2 86 43.0
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 2.2e-06 56.2 149 36.2
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 2.9e-06 55.8 102 40.2
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 3.8e-06 55.5 96 38.5
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 6.5e-06 54.7 95 47.4
VMungo1383G2444 Vigna mungo HOM05D001624 ORTHO05D001530 8.4e-06 54.3 87 39.1


User provided reference genes

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