Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G289.59 Capsicum annuum HOM05D002370 ORTHO05D003878 6.4e-123 444.1 228 100.0
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 2.0e-108 396.0 231 90.0
CAN.G1164.4 Capsicum annuum HOM05D002370 ORTHO05D003878 4.4e-108 394.8 231 90.0
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 7.6e-108 394.0 231 89.6
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 7.6e-108 394.0 231 89.6
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 7.1e-106 387.5 231 87.9
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 3.9e-104 381.7 231 87.0
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 3.9e-104 381.7 231 87.0
CAN.G411.107 Capsicum annuum HOM05D002370 ORTHO05D003878 2.2e-99 365.9 229 84.7
CAN.G1627.3 Capsicum annuum HOM05D002370 ORTHO05D003878 4.9e-99 364.8 221 88.7
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 8.7e-96 354.0 233 79.8
CAN.G1164.1 Capsicum annuum HOM05D002370 ORTHO05D003878 3.3e-95 352.1 231 83.1
Actinidia02446 Actinidia chinensis HOM05D002370 ORTHO05D003878 6.9e-93 344.4 233 76.8
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 9.0e-93 344.0 229 76.9
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 3.4e-92 342.0 234 75.6
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 5.8e-92 341.3 233 76.4
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 1.7e-91 339.7 238 74.8
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 2.2e-91 339.3 238 74.8
Cc02_g20170 Coffea canephora HOM05D002370 ORTHO05D003878 2.9e-91 339.0 233 74.7
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 2.9e-91 339.0 233 75.1
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 2.5e-90 335.9 233 74.7
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 4.2e-90 335.1 234 75.6
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 7.1e-90 334.3 234 76.1
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 9.3e-90 334.0 231 73.2
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 9.3e-90 334.0 231 73.2
Cpa.g.sc106.24 Carica papaya HOM05D002370 ORTHO05D003878 2.1e-89 332.8 234 72.6
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 2.1e-89 332.8 231 73.2
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 3.5e-89 332.0 233 74.2
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.5e-89 332.0 234 72.6
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 3.5e-89 332.0 234 72.6
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 4.6e-89 331.6 234 73.1
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 7.9e-89 330.9 233 74.7
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 7.9e-89 330.9 234 74.4
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 1.0e-88 330.5 232 72.8
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 1.3e-88 330.1 234 73.1
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 1.8e-88 329.7 234 72.2
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 1.8e-88 329.7 234 72.2
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 2.3e-88 329.3 234 71.4
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.9e-88 328.6 234 72.2
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 5.1e-88 328.2 233 71.7
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 5.1e-88 328.2 233 72.5
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 6.7e-88 327.8 234 73.5
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 1.1e-87 327.0 233 71.7
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 1.5e-87 326.6 215 76.7
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 2.5e-87 325.9 231 72.3
FAN24G1227 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.5e-87 325.9 231 72.3
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 2.5e-87 325.9 232 72.8
Lsat_1_v5_gn_4_143680 Lactuca sativa HOM05D002370 ORTHO05D003878 2.5e-87 325.9 234 73.1
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 3.3e-87 325.5 232 71.1
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.3e-87 325.5 234 71.8
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 4.3e-87 325.1 234 73.5
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 4.3e-87 325.1 234 71.4
Oeu028915.2 Olea europaea HOM05D002370 ORTHO05D003878 5.7e-87 324.7 233 73.0
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 7.4e-87 324.3 214 77.1
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 7.4e-87 324.3 232 72.4
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 9.6e-87 323.9 234 73.1
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 1.3e-86 323.6 235 71.9
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 1.6e-86 323.2 234 70.1
MD10G1112000 Malus domestica HOM05D002370 ORTHO05D003878 1.6e-86 323.2 234 70.1
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 3.7e-86 322.0 232 70.7
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 3.7e-86 322.0 234 71.4
QL11p028985 Quercus lobata HOM05D002370 ORTHO05D003878 4.8e-86 321.6 213 75.1
SGA_v2.0_scaffold519G52682 Striga asiatica HOM05D002370 ORTHO05D003878 8.2e-86 320.9 231 73.2
TAR625G0605 Trochodendron aralioides HOM05D002370 ORTHO05D003878 1.4e-85 320.1 233 71.2
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 1.4e-85 320.1 232 71.1
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 2.4e-85 319.3 231 71.0
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 2.4e-85 319.3 231 71.0
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 4.0e-85 318.5 235 70.2
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 5.3e-85 318.2 235 69.8
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 6.9e-85 317.8 235 70.6
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 6.9e-85 317.8 235 70.6
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 6.9e-85 317.8 211 76.3
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 9.0e-85 317.4 231 72.3
Haze_10321 Corylus avellana HOM05D002370 ORTHO05D003878 9.0e-85 317.4 240 68.8
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 1.2e-84 317.0 231 72.7
Sc18g0007320 Simmondsia chinensis HOM05D002370 ORTHO05D003878 1.5e-84 316.6 227 71.8
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 2.0e-84 316.2 234 69.7
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 3.4e-84 315.5 232 71.1
CAN.G1627.7 Capsicum annuum HOM05D002370 ORTHO05D003878 1.0e-83 313.9 231 77.5
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 6.5e-83 311.2 234 68.8
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 8.4e-83 310.8 234 67.9
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 1.4e-82 310.1 211 74.4
Psat4g229000 Pisum sativum HOM05D002370 ORTHO05D003878 1.4e-82 310.1 211 73.9
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 1.9e-82 309.7 211 74.4
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 1.9e-82 309.7 211 74.4
CDE06G0012 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 2.5e-82 309.3 230 67.4
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 2.5e-82 309.3 228 71.1
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 3.2e-82 308.9 235 68.5
TPR.G8301 Trifolium pratense HOM05D002370 ORTHO05D003878 4.2e-82 308.5 215 72.6
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 5.5e-82 308.1 235 68.9
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 1.2e-81 307.0 213 73.2
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.3e-80 302.8 234 66.2
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 3.0e-80 302.4 233 67.4
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 3.0e-80 302.4 230 66.1
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 5.1e-80 301.6 231 66.7
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 8.7e-80 300.8 234 67.5
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 1.1e-79 300.4 231 66.2
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 1.5e-79 300.1 234 66.2
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 3.3e-79 298.9 234 65.8
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 3.3e-79 298.9 234 65.8
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 5.7e-79 298.1 231 66.2
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 7.4e-79 297.7 234 65.0
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 1.3e-78 297.0 234 64.5
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 4.5e-76 288.5 234 62.8
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 4.5e-76 288.5 194 77.3
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 1.0e-75 287.3 231 62.3
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 8.5e-75 284.3 234 61.5
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 1.9e-74 283.1 234 61.1
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 1.9e-74 283.1 234 61.1
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 1.9e-74 283.1 234 61.1
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 2.5e-74 282.7 234 61.5
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 2.5e-74 282.7 234 61.5
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 3.2e-74 282.3 232 61.6
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 3.2e-74 282.3 234 61.5
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 1.2e-73 280.4 234 61.1
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 1.6e-73 280.0 327 50.5
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 7.9e-73 277.7 234 60.3
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 1.8e-72 276.6 225 65.8
Ah.01g024560 Amaranthus hybridus HOM05D002370 ORTHO05D003878 2.3e-72 276.2 194 72.2
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 6.3e-70 268.1 198 72.2
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 1.8e-69 266.5 198 69.7
Gohir.A01G009566 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.1e-69 265.8 168 79.8
CAN.G606.79 Capsicum annuum HOM05D002370 ORTHO05D020284 1.5e-68 263.5 205 73.2
Os05g0235300 Oryza sativa ssp. japonica HOM05D002370 ORTHO05D003878 1.5e-68 263.5 198 70.2
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 6.5e-67 258.1 198 68.2
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 1.5e-63 246.9 227 58.1
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 1.8e-61 240.0 211 59.7
SalBow6G1889 Salvia bowleyana HOM05D002370 ORTHO05D003878 2.4e-61 239.6 178 70.2
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 3.8e-59 232.3 175 69.1
vmacro01937 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 1.1e-58 230.7 210 62.4
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 6.7e-56 221.5 194 58.8
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 4.8e-54 215.3 213 57.7
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 2.0e-52 209.9 180 60.0
CAN.G10698.1 Capsicum annuum HOM05D002370 ORTHO05D003878 2.6e-52 209.5 120 91.7
PRCOL_00002418 Prasinoderma coloniale HOM05D002370 ORTHO05D003878 1.2e-44 184.1 257 42.0
MCO06G142 Micromonas commoda HOM05D002370 ORTHO05D003878 2.3e-40 169.9 190 50.0
Cre09.g400553 Chlamydomonas reinhardtii HOM05D002370 ORTHO05D003878 8.3e-38 161.4 219 44.7
CBR_g23926 Chara braunii HOM05D002370 ORTHO05D003878 1.5e-34 150.6 215 42.8
Oeu025303.1 Olea europaea HOM05D002370 ORTHO05D003878 3.2e-29 132.9 82 80.5
FAN20G0378 Fragaria x ananassa HOM05D002370 ORTHO05D020284 5.8e-23 112.1 172 41.3
CDE04G3197 Ceratophyllum demersum HOM05D002370 ORTHO05D020284 3.5e-20 102.8 66 78.8
Lalb_Chr16g0376331 Lupinus albus HOM05D002370 ORTHO05D020284 2.3e-19 100.1 55 87.3
Cfa026368 Carpinus fangiana HOM05D002370 ORTHO05D003878 7.3e-18 95.1 184 33.2
Atru.chr5.2257 Acer truncatum HOM05D002370 ORTHO05D003878 2.1e-17 93.6 59 79.7
Haze_26242 Corylus avellana HOM05D002370 ORTHO05D003878 2.1e-17 93.6 210 29.0
FAN15G0843 Fragaria x ananassa HOM05D002370 ORTHO05D003878 5.8e-15 85.5 88 54.5
PSO017G1105 Papaver somniferum HOM05D000352 ORTHO05D000260 5.4e-13 79.0 109 44.0
CAN.G411.94 Capsicum annuum HOM05D009846 ORTHO05D000368 9.9e-07 58.2 33 84.8
FvH4_2g06710 Fragaria vesca HOM05D002370 ORTHO05D020284 2.2e-06 57.0 34 79.4
FAN24G2034 Fragaria x ananassa HOM05D002370 ORTHO05D020284 2.2e-06 57.0 34 79.4
CAN.G1164.5 Capsicum annuum HOM05D009846 ORTHO05D002175 2.9e-06 56.6 33 81.8
Lsat_1_v5_gn_5_137761 Lactuca sativa HOM05D002370 ORTHO05D020284 2.9e-06 56.6 32 81.2


User provided reference genes

Program Settings