Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 7.1e-254 880.2 467 100.0
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 1.0e-106 391.3 421 56.3
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 4.4e-94 349.4 468 49.6
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 3.6e-88 329.7 214 83.6
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 1.2e-67 261.5 161 87.0
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 2.1e-59 234.2 326 50.9
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 9.9e-54 215.3 325 48.6
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 2.9e-53 213.8 325 48.6
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 8.4e-53 212.2 318 45.9
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.8e-47 194.5 356 41.6
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 7.1e-44 182.6 145 71.7
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 1.5e-38 164.9 324 43.8
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 4.9e-29 133.3 313 38.0
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 6.7e-26 122.9 311 37.3
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 1.6e-24 118.2 153 50.3
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 3.7e-24 117.1 319 35.4
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 6.3e-24 116.3 307 36.8
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.4e-23 114.4 313 35.5
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 2.0e-22 111.3 201 43.8
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 3.4e-22 110.5 146 48.6
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 3.4e-22 110.5 307 36.2
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 1.0e-21 109.0 307 34.9
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 5.0e-21 106.7 302 35.8
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.4e-20 105.1 174 43.1
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.4e-20 105.1 174 43.1
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 2.5e-20 104.4 331 33.2
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 5.5e-20 103.2 319 34.8
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 5.5e-20 103.2 316 35.8
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 9.3e-20 102.4 313 33.9
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 9.3e-20 102.4 305 33.8
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 4.6e-19 100.1 320 34.1
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 1.0e-18 99.0 322 32.9
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.3e-18 98.6 168 44.6
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 2.3e-18 97.8 312 34.0
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 2.3e-18 97.8 312 34.0
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 6.7e-18 96.3 175 41.1
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 2.5e-17 94.4 187 39.6
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 4.3e-17 93.6 317 31.9
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 1.3e-16 92.0 326 32.2
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 4.8e-16 90.1 195 40.5
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 8.2e-16 89.4 312 31.4
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 1.8e-15 88.2 171 38.0
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 4.1e-15 87.0 305 29.8
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 6.9e-15 86.3 284 30.6
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 6.9e-15 86.3 170 38.8
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 1.2e-14 85.5 377 30.2
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 1.5e-14 85.1 286 30.1
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 2.0e-14 84.7 317 30.0
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 1.7e-13 81.6 174 37.9
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 6.5e-13 79.7 162 38.9
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 6.5e-13 79.7 284 33.5
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 6.5e-13 79.7 317 30.9
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 8.5e-13 79.3 307 30.3
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 3.2e-12 77.4 193 36.8
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 5.5e-12 76.6 155 41.3
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 5.5e-12 76.6 177 36.7
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 5.5e-12 76.6 306 30.7
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 7.2e-12 76.3 312 28.2
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 7.2e-12 76.3 314 30.6
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 9.4e-12 75.9 294 28.6
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 9.4e-12 75.9 295 29.2
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 9.4e-12 75.9 317 31.9
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 9.4e-12 75.9 148 41.2
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 1.6e-11 75.1 183 38.3
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.7e-11 74.3 316 29.1
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 6.1e-11 73.2 176 37.5
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 6.1e-11 73.2 309 31.1
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 1.0e-10 72.4 307 30.3
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.8e-10 71.6 200 33.0
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 3.0e-10 70.9 172 33.7
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 3.9e-10 70.5 141 39.0
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 6.7e-10 69.7 178 34.3
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 6.7e-10 69.7 315 29.2
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 1.5e-09 68.6 316 32.0
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 1.5e-09 68.6 344 26.2
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.0e-09 68.2 309 28.2
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 2.0e-09 68.2 180 36.7
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 4.3e-09 67.0 310 33.2
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 4.3e-09 67.0 143 38.5
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.3e-09 67.0 143 38.5
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 9.7e-09 65.9 154 34.4
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 1.7e-08 65.1 311 30.2
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 4.8e-08 63.5 314 28.7
CAN.G106.13 Capsicum annuum HOM05D004628 ORTHO05D005166 1.4e-07 62.0 50 74.0
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.4e-07 62.0 195 33.3
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.1e-07 60.8 195 31.8
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 4.1e-07 60.5 317 29.7
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 5.3e-07 60.1 326 31.3
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 6.9e-07 59.7 103 40.8
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 9.1e-07 59.3 301 28.2
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 9.1e-07 59.3 185 31.9
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 1.2e-06 58.9 314 28.3
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.2e-06 58.9 314 28.3
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 1.5e-06 58.5 308 28.6
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 2.0e-06 58.2 143 35.7
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 2.0e-06 58.2 320 26.6
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 5.9e-06 56.6 143 35.0
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 7.7e-06 56.2 166 34.3


User provided reference genes

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