Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G289.47 Capsicum annuum HOM05D002799 ORTHO05D007076 9.7e-250 866.3 424 100.0
Sopen03g002460 Solanum pennellii HOM05D002799 ORTHO05D007076 2.0e-207 725.7 425 84.0
PGSC0003DMG400012810 Solanum tuberosum HOM05D002799 ORTHO05D007076 2.3e-206 722.2 422 84.6
Solyc03g006460.4 Solanum lycopersicum HOM05D002799 ORTHO05D007076 4.4e-202 708.0 413 84.0
CSS0010295 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D007076 1.5e-149 533.5 442 61.8
Actinidia08737 Actinidia chinensis HOM05D002799 ORTHO05D007076 8.5e-145 517.7 442 60.4
Dinv17267 Davidia involucrata HOM05D002799 ORTHO05D007076 4.2e-144 515.4 432 61.6
QL09p025824 Quercus lobata HOM05D002799 ORTHO05D007076 7.2e-144 514.6 436 61.2
CiPaw.05G237100 Carya illinoinensis HOM05D002799 ORTHO05D007076 3.1e-139 499.2 437 59.7
GSVIVG01024449001 Vitis vinifera HOM05D002799 ORTHO05D007076 4.1e-139 498.8 403 62.3
MSTRG.11401 Avicennia marina HOM05D002799 ORTHO05D007076 2.9e-137 492.7 424 60.4
SalBow5G5430 Salvia bowleyana HOM05D002799 ORTHO05D007076 9.4e-136 487.6 321 73.5
TAR374G0973 Trochodendron aralioides HOM05D002799 ORTHO05D007076 2.1e-135 486.5 441 56.7
Ciclev10001355m.g Citrus clementina HOM05D002799 ORTHO05D007076 3.0e-134 482.6 430 60.5
Atru.chr12.2008 Acer truncatum HOM05D002799 ORTHO05D007076 1.5e-133 480.3 333 69.4
Cc03_g15080 Coffea canephora HOM05D002799 ORTHO05D007076 2.8e-132 476.1 431 58.5
Thecc.08G172500 Theobroma cacao HOM05D002799 ORTHO05D007076 2.8e-132 476.1 444 57.0
COL.COLO4_24619 Corchorus olitorius HOM05D002799 ORTHO05D007076 3.7e-132 475.7 330 69.1
Duzib211G0014 Durio zibethinus HOM05D002799 ORTHO05D007076 1.2e-130 470.7 441 57.4
Nn1g02009 Nelumbo nucifera HOM05D002799 ORTHO05D007076 2.0e-130 469.9 448 55.6
Gorai.006G053300 Gossypium raimondii HOM05D002799 ORTHO05D007076 2.2e-129 466.5 443 56.9
MBI04_g21139_MAGBIO Magnolia biondii HOM05D002799 ORTHO05D007076 2.9e-129 466.1 425 56.0
Gohir.D09G053900 Gossypium hirsutum HOM05D002799 ORTHO05D007076 6.5e-129 464.9 442 56.1
Manes.08G164400 Manihot esculenta HOM05D002799 ORTHO05D007076 6.5e-129 464.9 435 58.4
Gohir.A09G055000 Gossypium hirsutum HOM05D002799 ORTHO05D007076 1.1e-128 464.2 442 57.0
MD01G1233700 Malus domestica HOM05D002799 ORTHO05D007076 1.1e-128 464.2 436 55.7
Migut.I00118 Erythranthe guttata HOM05D002799 ORTHO05D007076 4.2e-128 462.2 340 68.2
Oeu014983.2 Olea europaea HOM05D002799 ORTHO05D007076 5.5e-128 461.8 414 58.9
Eucgr.K00095 Eucalyptus grandis HOM05D002799 ORTHO05D007076 2.3e-126 456.4 374 63.6
ATR0829G228 Amborella trichopoda HOM05D002799 ORTHO05D007076 5.2e-126 455.3 331 66.2
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.5e-125 453.8 339 66.1
vmacro06500 Vaccinium macrocarpon HOM05D002799 ORTHO05D007076 2.0e-125 453.4 329 67.8
FAN10G3482 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.6e-125 453.0 341 65.7
FvH4_7g33590 Fragaria vesca HOM05D002799 ORTHO05D007076 4.4e-125 452.2 333 67.0
TWI34G0554 Tripterygium wilfordii HOM05D002799 ORTHO05D007076 5.7e-125 451.8 338 66.0
Carub.0003s2662 Capsella rubella HOM05D002799 ORTHO05D007076 9.7e-125 451.1 322 68.6
AT2G04940 Arabidopsis thaliana HOM05D002799 ORTHO05D007076 2.8e-124 449.5 323 66.9
Prupe.2G323900 Prunus persica HOM05D002799 ORTHO05D007076 3.7e-124 449.1 338 65.7
AL3G42700 Arabidopsis lyrata HOM05D002799 ORTHO05D007076 8.2e-124 448.0 336 66.4
Thhalv10002559m.g Eutrema salsugineum HOM05D002799 ORTHO05D007076 1.4e-123 447.2 333 65.5
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.4e-123 447.2 339 64.9
Potri.015G079500 Populus trichocarpa HOM05D002799 ORTHO05D007076 3.1e-123 446.0 337 65.0
Medtr4g077510 Medicago truncatula HOM05D002799 ORTHO05D007076 1.6e-122 443.7 326 67.5
CsaV3_4G004510 Cucumis sativus L. HOM05D002799 ORTHO05D007076 5.9e-122 441.8 336 66.4
arahy.Tifrunner.gnm1.ann1.IZ2599 Arachis hypogaea HOM05D002799 ORTHO05D007076 7.7e-122 441.4 340 66.2
A03p44540 Brassica napus HOM05D002799 ORTHO05D007076 7.7e-122 441.4 339 64.9
BraA03t13587Z Brassica rapa HOM05D002799 ORTHO05D007076 7.7e-122 441.4 339 64.9
Sp3g23560 Schrenkiella parvula HOM05D002799 ORTHO05D007076 1.0e-121 441.0 336 66.7
BcaB08g34494 Brassica carinata HOM05D002799 ORTHO05D007076 1.3e-121 440.7 338 63.9
C03p55340 Brassica napus HOM05D002799 ORTHO05D007076 1.3e-121 440.7 339 64.3
Phvul.011G021500 Phaseolus vulgaris HOM05D002799 ORTHO05D007076 1.3e-121 440.7 359 64.1
arahy.Tifrunner.gnm1.ann1.ZMX436 Arachis hypogaea HOM05D002799 ORTHO05D007076 1.7e-121 440.3 339 66.4
BcaC01g03181 Brassica carinata HOM05D002799 ORTHO05D007076 1.7e-121 440.3 339 64.3
BolC3t17806H Brassica oleracea HOM05D002799 ORTHO05D007076 1.7e-121 440.3 339 64.3
Glyma.12G019100 Glycine max HOM05D002799 ORTHO05D007076 3.8e-121 439.1 344 65.4
Lj1C1032G6 Lonicera japonica HOM05D002799 ORTHO05D007076 3.8e-121 439.1 435 56.6
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.5e-121 438.3 335 64.2
THA.LOC104815357 Tarenaya hassleriana HOM05D002799 ORTHO05D007076 6.5e-121 438.3 357 63.0
Lj3g0008833 Lotus japonicus HOM05D002799 ORTHO05D007076 1.5e-120 437.2 335 65.7
Ca_29855_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 2.5e-120 436.4 343 64.1
CARHR102970 Cardamine hirsuta HOM05D002799 ORTHO05D007076 3.2e-120 436.0 322 65.5
Solyc03g006452.1 Solanum lycopersicum HOM05D002799 ORTHO05D007076 9.4e-120 434.5 314 71.7
RcHm_v2.0_Chr1g0383851 Rosa chinensis HOM05D002799 ORTHO05D007076 2.1e-119 433.3 252 80.2
MD07G1305800 Malus domestica HOM05D002799 ORTHO05D007076 6.1e-119 431.8 340 62.1
HPP92_015127 Vanilla planifolia HOM05D002799 ORTHO05D007076 1.4e-118 430.6 321 66.4
VMungo1127G2112 Vigna mungo HOM05D002799 ORTHO05D007076 5.2e-118 428.7 359 63.0
CANSAT21G1863 Cannabis sativa HOM05D002799 ORTHO05D007076 1.2e-117 427.6 351 62.4
Lalb_Chr03g0024441 Lupinus albus HOM05D002799 ORTHO05D007076 3.3e-117 426.0 335 62.7
Sed0006194 Sechium edule HOM05D002799 ORTHO05D007076 3.3e-117 426.0 336 64.3
Ca_04931_v3 Cicer arietinum L. HOM05D002799 ORTHO05D007076 4.4e-117 425.6 333 64.6
Aqoxy3G02040 Aquilegia oxysepala HOM05D002799 ORTHO05D007076 5.7e-117 425.2 332 63.3
DCAR_009002 Daucus carota HOM05D002799 ORTHO05D007076 1.3e-116 424.1 336 64.6
EL10Ac3g05098 Beta vulgaris HOM05D002799 ORTHO05D007076 1.1e-115 421.0 342 62.3
PSO782G0547 Papaver somniferum HOM05D002799 ORTHO05D007076 1.8e-115 420.2 348 60.6
Aa31LG3G2760 Aethionema arabicum HOM05D002799 ORTHO05D007076 7.0e-115 418.3 321 66.0
PSO063G7569 Papaver somniferum HOM05D002799 ORTHO05D007076 5.0e-113 412.1 340 61.2
Hma1.2p1_0758F.1_g213600 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 2.5e-112 409.8 246 78.0
Ah.13g072670 Amaranthus hybridus HOM05D002799 ORTHO05D007076 3.2e-112 409.5 333 61.6
PGR004G1694 Punica granatum HOM05D002799 ORTHO05D007076 9.4e-112 407.9 403 55.8
AUR62028151 Chenopodium quinoa HOM05D002799 ORTHO05D007076 1.0e-110 404.4 328 60.1
CDE01G0680 Ceratophyllum demersum HOM05D000526 ORTHO05D000956 4.0e-110 402.5 328 61.3
ClCG07G017310 Citrullus lanatus HOM05D002799 ORTHO05D007076 4.4e-109 399.1 337 60.5
ECA233G3743 Erigeron canadensis HOM05D002799 ORTHO05D007076 9.8e-109 397.9 329 59.3
MELO3C017614.2 Cucumis melo HOM05D002799 ORTHO05D007076 2.2e-108 396.7 364 57.4
HanXRQChr04g0105251 Helianthus annuus HOM05D002799 ORTHO05D007076 4.8e-108 395.6 351 58.7
Lsat_1_v5_gn_8_3761 Lactuca sativa HOM05D002799 ORTHO05D007076 1.2e-103 380.9 350 56.0
Lj2A621G40 Lonicera japonica HOM05D002799 ORTHO05D007076 2.8e-103 379.8 380 54.2
unitig_62.g23564 Utricularia gibba HOM05D002799 ORTHO05D007076 6.8e-102 375.2 319 60.2
Psat7g171360 Pisum sativum HOM05D002799 ORTHO05D007076 1.1e-99 367.9 320 60.0
Zm00001eb430250 Zea mays HOM05D002799 ORTHO05D007076 7.0e-99 365.2 233 71.7
AUR62005914 Chenopodium quinoa HOM05D002799 ORTHO05D007076 7.8e-98 361.7 328 55.8
Os04g0599400 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 1.3e-97 360.9 331 56.2
Os02g0238500 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D007076 6.1e-95 352.1 231 71.4
Hund09770 Selenicereus undatus HOM05D002799 ORTHO05D007076 1.4e-94 350.9 394 50.3
Nitab4.5_0000701g0050 Nicotiana tabacum HOM05D002799 ORTHO05D007076 5.0e-89 332.4 284 63.4
Nitab4.5_0000793g0020 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.5e-88 330.1 232 71.6
Cpa.g.sc67.53 Carica papaya HOM05D002799 ORTHO05D007076 4.3e-88 329.3 191 78.5
Sc13g0010800 Simmondsia chinensis HOM05D002799 ORTHO05D007076 1.2e-87 327.8 266 61.7
AagrBONN_evm.TU.Sc2ySwM_368.1885 Anthoceros agrestis HOM05D002799 ORTHO05D007076 4.4e-85 319.3 339 49.6
Pp3c3_18900 Physcomitrium patens HOM05D002799 ORTHO05D007076 3.5e-82 309.7 292 54.5
Pp3c5_23880 Physcomitrium patens HOM05D002799 ORTHO05D007076 1.0e-81 308.1 322 50.6
Actinidia34299 Actinidia chinensis HOM05D002799 ORTHO05D007076 2.8e-79 300.1 191 75.4
Cfa015896 Carpinus fangiana HOM05D002799 ORTHO05D007076 1.8e-78 297.4 426 44.8
Mapoly0041s0072 Marchantia polymorpha HOM05D002799 ORTHO05D007076 8.6e-73 278.5 270 51.5
CBR_g26239 Chara braunii HOM05D002799 ORTHO05D007076 3.4e-69 266.5 345 41.2
SMO196G0267 Selaginella moellendorffii HOM05D002799 ORTHO05D007076 2.1e-66 257.3 196 59.7
Lj3A801T16 Lonicera japonica HOM05D002799 ORTHO05D007076 2.8e-63 246.9 230 51.7
Sabra15G0103700 Salix brachista HOM05D002799 ORTHO05D007076 1.4e-59 234.6 291 45.4
Zm00001eb071960 Zea mays HOM05D002799 ORTHO05D007076 1.4e-54 218.0 119 77.3
FvH4_7g33592 Fragaria vesca HOM05D002799 ORTHO05D007076 4.0e-54 216.5 123 81.3
FvH4_7g33593 Fragaria vesca HOM05D002799 ORTHO05D007076 7.6e-53 212.2 201 55.2
Haze_00592 Corylus avellana HOM05D002799 ORTHO05D007076 2.4e-51 207.2 304 43.4
Peaxi162Scf00195g01110 Petunia axillaris HOM05D002799 ORTHO05D007076 9.3e-51 205.3 110 87.3
Hma1.2p1_0758F.1_g213590 Hydrangea macrophylla HOM05D002799 ORTHO05D007076 1.6e-50 204.5 241 46.9
Sabra15G0103800 Salix brachista HOM05D002799 ORTHO05D007076 9.9e-45 185.3 114 79.8
Solyc03g006454.1 Solanum lycopersicum HOM05D002799 ORTHO05D007076 4.9e-44 183.0 144 64.6
Nitab4.5_0000793g0030 Nicotiana tabacum HOM05D002799 ORTHO05D007076 2.5e-43 180.6 171 58.5
Nitab4.5_0000701g0060 Nicotiana tabacum HOM05D002799 ORTHO05D007076 7.4e-40 169.1 171 56.1
PRCOL_00006278 Prasinoderma coloniale HOM05D002799 ORTHO05D007076 5.3e-38 162.9 264 39.0
SEGI_10035 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 1.7e-36 157.9 99 73.7
Cre06.g267850 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D007076 5.5e-35 152.9 342 30.1
TPR.G19958 Trifolium pratense HOM05D002799 ORTHO05D007076 1.0e-25 122.1 61 86.9
Cfa023729 Carpinus fangiana HOM05D002799 ORTHO05D007076 2.4e-22 110.9 374 27.0
HanXRQChr15g0477781 Helianthus annuus HOM05D002799 ORTHO05D007076 4.5e-21 106.7 98 58.2
Zm00001eb315690 Zea mays HOM05D002799 ORTHO05D007076 5.0e-20 103.2 55 78.2
QL03p008982 Quercus lobata HOM05D000009 ORTHO05D000008 8.5e-20 102.4 242 35.5
TPR.G21490 Trifolium pratense HOM05D002799 ORTHO05D007076 1.9e-19 101.3 73 67.1
Actinidia04566 Actinidia chinensis HOM05D002799 ORTHO05D007076 1.6e-18 98.2 185 38.9
Lj2C621T3 Lonicera japonica HOM05D002799 ORTHO05D007076 3.6e-18 97.1 62 75.8
Haze_00593 Corylus avellana HOM05D002799 ORTHO05D007076 3.0e-17 94.0 61 78.7
FAN10G3554 Fragaria x ananassa HOM05D012649 ORTHO05D007076 2.0e-16 91.3 130 43.1
SEGI_38885 Sequoiadendron giganteum HOM05D002799 ORTHO05D007076 7.4e-16 89.4 80 61.2
QL03p009165 Quercus lobata HOM05D000009 ORTHO05D000008 3.5e-13 80.5 55 74.5
VMungo1127G1706 Vigna mungo HOM05D002799 ORTHO05D007076 2.9e-12 77.4 109 41.3
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 4.2e-11 73.6 47 70.2
SHI36546 Sapria himalayana HOM05D000107 ORTHO05D000233 2.0e-08 64.7 40 75.0
Cpa.g.sc67.52 Carica papaya HOM05D002799 ORTHO05D007076 7.4e-08 62.8 150 31.3


User provided reference genes

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