Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G285.7 Capsicum annuum HOM05D000136 ORTHO05D000080 3.8e-51 205.3 175 100.0
CAN.G790.66 Capsicum annuum HOM05D000136 ORTHO05D000080 2.0e-23 113.2 59 91.5
CAN.G1694.3 Capsicum annuum HOM05D000136 ORTHO05D000080 2.6e-23 112.8 59 89.8
PGSC0003DMG400009173 Solanum tuberosum HOM05D000136 ORTHO05D000080 2.5e-18 96.3 59 83.1
Peaxi162Scf00038g02224 Petunia axillaris HOM05D000136 ORTHO05D000080 1.2e-15 87.4 61 70.5
Manes.11G014800 Manihot esculenta HOM05D000136 ORTHO05D000080 2.6e-15 86.3 60 70.0
Nitab4.5_0003981g0080 Nicotiana tabacum HOM05D000136 ORTHO05D000080 1.1e-13 80.9 60 66.7
Solyc03g123540.3 Solanum lycopersicum HOM05D000136 ORTHO05D000080 1.1e-13 80.9 59 74.6
Sopen03g041310 Solanum pennellii HOM05D000136 ORTHO05D000080 1.1e-13 80.9 59 74.6
QL05p001966 Quercus lobata HOM05D000136 ORTHO05D000080 1.4e-13 80.5 56 67.9
Dinv37836 Davidia involucrata HOM05D000136 ORTHO05D000080 3.5e-12 75.9 54 70.4
MD17G1151000 Malus domestica HOM05D000136 ORTHO05D000080 6.0e-12 75.1 57 66.7
Gohir.A05G137800 Gossypium hirsutum HOM05D000136 ORTHO05D000080 7.8e-12 74.7 63 58.7
Cfa003491 Carpinus fangiana HOM05D000136 ORTHO05D000080 1.0e-11 74.3 55 63.6
Actinidia21818 Actinidia chinensis HOM05D000136 ORTHO05D000080 1.7e-11 73.6 72 55.6
Gohir.D05G139900 Gossypium hirsutum HOM05D000136 ORTHO05D000080 2.3e-11 73.2 63 58.7
Lj3g0015700 Lotus japonicus HOM05D000136 ORTHO05D000080 2.3e-11 73.2 55 61.8
Gorai.009G144200 Gossypium raimondii HOM05D000136 ORTHO05D000080 3.9e-11 72.4 63 58.7
CANSAT56G1017 Cannabis sativa HOM05D000136 ORTHO05D000080 5.1e-11 72.0 54 63.0
Haze_16102 Corylus avellana HOM05D000136 ORTHO05D000080 5.1e-11 72.0 58 55.2
CiPaw.01G214000 Carya illinoinensis HOM05D000136 ORTHO05D000080 1.1e-10 70.9 54 64.8
Prupe.3G034800 Prunus persica HOM05D000136 ORTHO05D000080 1.5e-10 70.5 55 63.6
vmacro15068 Vaccinium macrocarpon HOM05D000136 ORTHO05D000080 1.9e-10 70.1 60 60.0
Rhsim08G0242400 Rhododendron simsii HOM05D000136 ORTHO05D000080 2.5e-10 69.7 60 60.0
Eucgr.I02136 Eucalyptus grandis HOM05D000136 ORTHO05D000080 3.3e-10 69.3 59 55.9
MBI13_g01669_MAGBIO Magnolia biondii HOM05D000136 ORTHO05D000080 3.3e-10 69.3 55 61.8
Potri.003G071100 Populus trichocarpa HOM05D000136 ORTHO05D000080 7.3e-10 68.2 61 52.5
Duzib235G0174 Durio zibethinus HOM05D000136 ORTHO05D000080 9.6e-10 67.8 60 51.7
Lj9C536T8 Lonicera japonica HOM05D000136 ORTHO05D000080 9.6e-10 67.8 55 65.5
COL.COLO4_30831 Corchorus olitorius HOM05D000136 ORTHO05D000080 1.2e-09 67.4 64 53.1
Cpa.g.sc25.172 Carica papaya HOM05D000136 ORTHO05D000080 1.6e-09 67.0 55 54.5
Thecc.06G127300 Theobroma cacao HOM05D000136 ORTHO05D000080 1.6e-09 67.0 63 54.0
Lalb_Chr10g0101231 Lupinus albus HOM05D000136 ORTHO05D000080 2.1e-09 66.6 56 58.9
PGR119G2070 Punica granatum HOM05D000136 ORTHO05D000080 3.6e-09 65.9 56 53.6
BcaC01g01429 Brassica carinata HOM05D000136 ORTHO05D000080 4.7e-09 65.5 57 52.6
C03p91930 Brassica napus HOM05D000136 ORTHO05D000080 4.7e-09 65.5 57 52.6
BolC3t21513H Brassica oleracea HOM05D000136 ORTHO05D000080 4.7e-09 65.5 57 52.6
Hma1.2p1_0090F.1_g045990 Hydrangea macrophylla HOM05D000136 ORTHO05D000080 6.2e-09 65.1 55 60.0
TAR365G0096 Trochodendron aralioides HOM05D000428 ORTHO05D009311 6.2e-09 65.1 54 59.3
TAR624G1315 Trochodendron aralioides HOM05D000136 ORTHO05D000080 6.2e-09 65.1 56 60.7
Cc04_g00900 Coffea canephora HOM05D000136 ORTHO05D000080 1.4e-08 63.9 70 45.7
SalBow1G3649 Salvia bowleyana HOM05D000136 ORTHO05D000080 1.4e-08 63.9 62 50.0
SalBow3G1470 Salvia bowleyana HOM05D000136 ORTHO05D000080 1.4e-08 63.9 62 50.0
SalBow6G3653 Salvia bowleyana HOM05D000136 ORTHO05D000080 1.4e-08 63.9 62 50.0
THA.LOC104815608 Tarenaya hassleriana HOM05D000136 ORTHO05D000080 1.4e-08 63.9 53 50.9
A08p01270 Brassica napus HOM05D000136 ORTHO05D000080 2.4e-08 63.2 57 50.9
BraA08t32178Z Brassica rapa HOM05D000136 ORTHO05D000080 2.4e-08 63.2 57 50.9
AT1G54050 Arabidopsis thaliana HOM05D000136 ORTHO05D000080 4.0e-08 62.4 59 50.8
Ciclev10026683m.g Citrus clementina HOM05D000136 ORTHO05D000080 4.0e-08 62.4 63 52.4
HanXRQChr12g0360161 Helianthus annuus HOM05D000136 ORTHO05D000080 4.0e-08 62.4 70 50.0
Thhalv10011844m.g Eutrema salsugineum HOM05D000136 ORTHO05D000080 5.2e-08 62.0 58 50.0
Duzib192G0788 Durio zibethinus HOM05D000136 ORTHO05D000080 8.9e-08 61.2 74 44.6
Nitab4.5_0002441g0040 Nicotiana tabacum HOM05D000136 ORTHO05D000080 1.2e-07 60.8 47 63.8
MSTRG.10925 Avicennia marina HOM05D000136 ORTHO05D000080 1.5e-07 60.5 68 48.5
BcaB04g17033 Brassica carinata HOM05D000136 ORTHO05D000080 2.6e-07 59.7 57 50.9
Aa31LG10G1370 Aethionema arabicum HOM05D000136 ORTHO05D000080 3.4e-07 59.3 56 50.0
Carub.0001s4328 Capsella rubella HOM05D000136 ORTHO05D000080 3.4e-07 59.3 57 47.4
ClCG07G014370 Citrullus lanatus HOM05D000136 ORTHO05D000080 4.4e-07 58.9 58 50.0
CARHR044380 Cardamine hirsuta HOM05D000136 ORTHO05D000080 5.8e-07 58.5 56 50.0
Sc15g0000650 Simmondsia chinensis HOM05D000136 ORTHO05D000080 5.8e-07 58.5 54 51.9
arahy.Tifrunner.gnm1.ann1.BPK097 Arachis hypogaea HOM05D000136 ORTHO05D000080 7.6e-07 58.2 65 46.2
Ca_23421_v3 Cicer arietinum L. HOM05D000136 ORTHO05D000080 7.6e-07 58.2 37 73.0
Ca_30849_v3 Cicer arietinum L. HOM05D000136 ORTHO05D000080 7.6e-07 58.2 37 73.0
FvH4_6g35450 Fragaria vesca HOM05D000136 ORTHO05D000080 7.6e-07 58.2 56 57.1
FAN09G2084 Fragaria x ananassa HOM05D000136 ORTHO05D000080 7.6e-07 58.2 56 57.1
FAN14G4247 Fragaria x ananassa HOM05D000136 ORTHO05D000080 7.6e-07 58.2 56 57.1
AL1G62750 Arabidopsis lyrata HOM05D000136 ORTHO05D000080 9.9e-07 57.8 60 46.7
Lsat_1_v5_gn_5_136741 Lactuca sativa HOM05D000136 ORTHO05D000080 1.3e-06 57.4 55 54.5
RcHm_v2.0_Chr2g0147001 Rosa chinensis HOM05D000136 ORTHO05D000080 1.3e-06 57.4 55 54.5
arahy.Tifrunner.gnm1.ann1.E4H0XU Arachis hypogaea HOM05D000136 ORTHO05D000080 1.7e-06 57.0 64 46.9
FAN05G1919 Fragaria x ananassa HOM05D000136 ORTHO05D000080 1.7e-06 57.0 56 57.1
Sp1g40490 Schrenkiella parvula HOM05D000136 ORTHO05D000080 1.7e-06 57.0 57 47.4
VMungo0331G0847 Vigna mungo HOM05D000136 ORTHO05D000080 2.9e-06 56.2 56 53.6
TPR.G16666 Trifolium pratense HOM05D000136 ORTHO05D000080 3.8e-06 55.8 53 52.8
arahy.Tifrunner.gnm1.ann1.C18Q5H Arachis hypogaea HOM05D000136 ORTHO05D000080 6.4e-06 55.1 66 48.5
Glyma.16G012000 Glycine max HOM05D000136 ORTHO05D000080 8.4e-06 54.7 56 53.6


User provided reference genes

Program Settings