Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 2.2e-70 268.9 135 100.0
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.4e-13 79.3 44 88.6
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.2e-13 78.6 69 59.4
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 5.5e-13 78.2 44 88.6
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.6e-12 76.6 44 84.1
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 7.9e-12 74.3 44 84.1
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 1.3e-11 73.6 44 81.8
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 2.3e-11 72.8 44 72.7
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.0e-11 72.4 44 75.0
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.0e-11 72.4 69 52.2
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.7e-11 71.2 44 75.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 6.7e-11 71.2 44 77.3
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 6.7e-11 71.2 43 81.4
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.1e-10 70.5 43 76.7
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.1e-10 70.5 44 72.7
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.1e-10 70.5 69 52.2
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 1.5e-10 70.1 48 70.8
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.5e-10 70.1 49 69.4
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.9e-10 69.7 44 75.0
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.9e-10 69.7 44 75.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 2.5e-10 69.3 69 47.8
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 4.3e-10 68.6 44 70.5
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 4.3e-10 68.6 44 72.7
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 7.4e-10 67.8 43 72.1
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 9.6e-10 67.4 60 56.7
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 9.6e-10 67.4 44 70.5
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 9.6e-10 67.4 49 61.2
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.3e-09 67.0 44 65.9
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 2.8e-09 65.9 44 72.7
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.8e-09 65.9 44 65.9
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 4.8e-09 65.1 90 43.3
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 6.2e-09 64.7 51 62.7
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 6.2e-09 64.7 44 72.7
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 8.2e-09 64.3 44 68.2
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.4e-08 63.5 44 65.9
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.8e-08 63.2 69 47.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 1.8e-08 63.2 66 45.5
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.8e-08 63.2 50 62.0
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 2.4e-08 62.8 44 63.6
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.4e-08 62.8 49 59.2
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 3.1e-08 62.4 44 63.6
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 3.1e-08 62.4 60 51.7
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.1e-08 62.4 69 43.5
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 3.1e-08 62.4 69 52.2
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.0e-08 62.0 52 51.9
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 5.3e-08 61.6 69 44.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.3e-08 61.6 59 52.5
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 9.0e-08 60.8 44 61.4
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.5e-07 60.1 44 61.4
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.5e-07 60.1 48 56.2
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.0e-07 59.7 44 59.1
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 2.0e-07 59.7 69 44.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 2.6e-07 59.3 44 56.8
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.6e-07 59.3 69 43.5
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 2.6e-07 59.3 69 43.5
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 3.4e-07 58.9 69 40.6
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 4.5e-07 58.5 69 43.5
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 4.5e-07 58.5 69 43.5
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 5.8e-07 58.2 68 44.1
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 5.8e-07 58.2 44 56.8
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 7.6e-07 57.8 45 60.0
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.0e-06 57.4 69 44.9
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.3e-06 57.0 68 42.6
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.3e-06 57.0 69 43.5
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.2e-06 56.2 44 59.1
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 2.9e-06 55.8 69 40.6
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 4.9e-06 55.1 44 56.8


User provided reference genes

Program Settings