Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2846.2 Capsicum annuum HOM05D005972 ORTHO05D007548 6.4e-32 140.2 74 100.0
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 3.5e-14 81.3 51 84.3
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 2.4e-10 68.6 50 72.0
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 2.4e-10 68.6 50 72.0
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 6.9e-10 67.0 50 70.0
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 1.3e-08 62.8 50 66.0
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 2.2e-08 62.0 50 64.0
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 5.5e-07 57.4 50 58.0
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 7.1e-07 57.0 49 57.1
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 1.6e-06 55.8 50 54.0
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 2.1e-06 55.5 49 59.2
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 3.5e-06 54.7 49 55.1
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 4.6e-06 54.3 49 59.2
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 4.6e-06 54.3 49 51.0
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 4.6e-06 54.3 49 55.1


User provided reference genes

Program Settings