Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G283.12 Capsicum annuum HOM05D001673 ORTHO05D013418 1.6e-71 272.7 142 100.0
Atru.chr5.3308 Acer truncatum HOM05D001673 ORTHO05D002312 4.2e-32 141.7 110 71.8
unitig_52.g17374 Utricularia gibba HOM05D001673 ORTHO05D002312 4.2e-32 141.7 142 59.2
unitig_0.g2351 Utricularia gibba HOM05D001673 ORTHO05D002312 1.6e-31 139.8 117 66.7
Aqoxy6G02183 Aquilegia oxysepala HOM05D001673 ORTHO05D002312 2.1e-31 139.4 110 70.9
Gorai.002G196900 Gossypium raimondii HOM05D001673 ORTHO05D002312 1.8e-30 136.3 111 70.3
Eucgr.I01410 Eucalyptus grandis HOM05D001673 ORTHO05D002312 4.0e-30 135.2 104 71.2
Nitab4.5_0001891g0010 Nicotiana tabacum HOM05D001673 ORTHO05D002312 6.7e-30 134.4 88 81.8
Nitab4.5_0011722g0010 Nicotiana tabacum HOM05D001673 ORTHO05D002312 6.7e-30 134.4 88 81.8
CAN.G588.70 Capsicum annuum HOM05D001673 ORTHO05D002312 1.5e-29 133.3 88 80.7
Oeu035588.1 Olea europaea HOM05D001673 ORTHO05D002312 1.5e-29 133.3 88 80.7
Peaxi162Scf00362g00725 Petunia axillaris HOM05D001673 ORTHO05D002312 1.5e-29 133.3 88 80.7
COL.COLO4_17325 Corchorus olitorius HOM05D001673 ORTHO05D002312 2.0e-29 132.9 88 80.7
Gorai.002G003200 Gossypium raimondii HOM05D001673 ORTHO05D002312 2.0e-29 132.9 141 56.0
CiPaw.05G081300 Carya illinoinensis HOM05D001673 ORTHO05D002312 2.6e-29 132.5 88 80.7
FvH4_2g01290 Fragaria vesca HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
FAN15G1966 Fragaria x ananassa HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
FAN20G1059 Fragaria x ananassa HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
FAN24G0828 Fragaria x ananassa HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
FAN27G1306 Fragaria x ananassa HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
MD00G1173700 Malus domestica HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
MD05G1120900 Malus domestica HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
Prupe.8G164700 Prunus persica HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
RcHm_v2.0_Chr6g0251951 Rosa chinensis HOM05D001673 ORTHO05D002312 3.3e-29 132.1 88 79.5
Oeu006641.2 Olea europaea HOM05D001673 ORTHO05D002312 4.4e-29 131.7 88 79.5
Hund06431 Selenicereus undatus HOM05D001673 ORTHO05D002312 5.7e-29 131.3 88 78.4
MBI09_g17622_MAGBIO Magnolia biondii HOM05D001673 ORTHO05D002312 7.5e-29 131.0 110 67.3
TWI31G1474 Tripterygium wilfordii HOM05D001673 ORTHO05D002312 7.5e-29 131.0 88 79.5
Migut.N01316 Erythranthe guttata HOM05D001673 ORTHO05D002312 9.7e-29 130.6 88 78.4
SalBow3G3185 Salvia bowleyana HOM05D001673 ORTHO05D002312 9.7e-29 130.6 88 78.4
Thecc.02G061100 Theobroma cacao HOM05D001673 ORTHO05D002312 9.7e-29 130.6 88 78.4
AUR62013042 Chenopodium quinoa HOM05D001673 ORTHO05D002312 1.3e-28 130.2 98 73.5
Gohir.A12G037650 Gossypium hirsutum HOM05D001673 ORTHO05D013418 1.7e-28 129.8 88 77.3
Gohir.D12G034800 Gossypium hirsutum HOM05D001673 ORTHO05D002312 1.7e-28 129.8 89 76.4
Gorai.008G035900 Gossypium raimondii HOM05D001673 ORTHO05D002312 1.7e-28 129.8 88 77.3
Glyma.11G107500 Glycine max HOM05D001673 ORTHO05D002312 2.2e-28 129.4 88 78.4
Glyma.12G032500 Glycine max HOM05D001673 ORTHO05D002312 2.2e-28 129.4 88 78.4
Cc02_g16240 Coffea canephora HOM05D001673 ORTHO05D002312 2.8e-28 129.0 88 77.3
ECA234G2208 Erigeron canadensis HOM05D001673 ORTHO05D002312 2.8e-28 129.0 87 79.3
SGA_v2.0_scaffold80G25844 Striga asiatica HOM05D001673 ORTHO05D002312 2.8e-28 129.0 88 77.3
PSO541G1030 Papaver somniferum HOM05D001673 ORTHO05D002312 3.7e-28 128.6 97 74.2
Sc14g0002230 Simmondsia chinensis HOM05D001673 ORTHO05D002312 3.7e-28 128.6 89 76.4
Dinv14100 Davidia involucrata HOM05D001673 ORTHO05D002312 4.8e-28 128.3 88 78.4
PSO675G1883 Papaver somniferum HOM05D001673 ORTHO05D002312 4.8e-28 128.3 97 74.2
Phvul.011G035200 Phaseolus vulgaris HOM05D001673 ORTHO05D002312 4.8e-28 128.3 88 77.3
Gohir.A01G002700 Gossypium hirsutum HOM05D001673 ORTHO05D002312 6.3e-28 127.9 141 54.6
THA.LOC104807813 Tarenaya hassleriana HOM05D001673 ORTHO05D002312 6.3e-28 127.9 110 66.4
QL11p050142 Quercus lobata HOM05D001673 ORTHO05D002312 8.2e-28 127.5 88 76.1
arahy.Tifrunner.gnm1.ann1.5SR8FF Arachis hypogaea HOM05D001673 ORTHO05D002312 1.1e-27 127.1 88 76.1
arahy.Tifrunner.gnm1.ann1.VNV0G0 Arachis hypogaea HOM05D001673 ORTHO05D002312 1.1e-27 127.1 88 76.1
Ciclev10027670m.g Citrus clementina HOM05D001673 ORTHO05D002312 1.1e-27 127.1 89 78.7
Lsat_1_v5_gn_4_71560 Lactuca sativa HOM05D001673 ORTHO05D002312 1.1e-27 127.1 107 68.2
TAR381G1293 Trochodendron aralioides HOM05D001673 ORTHO05D002312 1.1e-27 127.1 88 75.0
CAN.G186.13 Capsicum annuum HOM05D001673 ORTHO05D013418 1.4e-27 126.7 88 77.3
Lalb_Chr19g0139141 Lupinus albus HOM05D001673 ORTHO05D002312 1.4e-27 126.7 88 75.0
Solyc01g111530.3 Solanum lycopersicum HOM05D001673 ORTHO05D002312 1.4e-27 126.7 87 78.2
Sopen01g053570 Solanum pennellii HOM05D001673 ORTHO05D002312 1.4e-27 126.7 87 78.2
VMungo1127G1414 Vigna mungo HOM05D001673 ORTHO05D002312 1.4e-27 126.7 88 76.1
AUR62010051 Chenopodium quinoa HOM05D001673 ORTHO05D002312 1.8e-27 126.3 119 63.9
HanXRQChr10g0300921 Helianthus annuus HOM05D001673 ORTHO05D002312 1.8e-27 126.3 85 80.0
Sc08g0002990 Simmondsia chinensis HOM05D001673 ORTHO05D002312 1.8e-27 126.3 86 77.9
CSS0031397 Camellia sinensis var. sinensis HOM05D001673 ORTHO05D002312 3.1e-27 125.6 86 76.7
Dinv41946 Davidia involucrata HOM05D001673 ORTHO05D002312 3.1e-27 125.6 88 78.4
Nn5g30770 Nelumbo nucifera HOM05D001673 ORTHO05D002312 3.1e-27 125.6 88 75.0
Nn6g31999 Nelumbo nucifera HOM05D001673 ORTHO05D002312 3.1e-27 125.6 88 76.1
HPP92_015010 Vanilla planifolia HOM05D001673 ORTHO05D002312 3.1e-27 125.6 112 63.4
Lsat_1_v5_gn_8_124281 Lactuca sativa HOM05D001673 ORTHO05D002312 4.1e-27 125.2 85 78.8
Sabra09G0104000 Salix brachista HOM05D001673 ORTHO05D002312 4.1e-27 125.2 87 75.9
CiPaw.06G122700 Carya illinoinensis HOM05D001673 ORTHO05D002312 5.3e-27 124.8 85 77.6
Duzib248G0095 Durio zibethinus HOM05D001673 ORTHO05D002312 5.3e-27 124.8 109 65.1
SGA_v2.0_scaffold207G41915 Striga asiatica HOM05D001673 ORTHO05D002312 5.3e-27 124.8 92 73.9
Ah.01g008490 Amaranthus hybridus HOM05D001673 ORTHO05D013418 1.2e-26 123.6 92 71.7
CSS0010551 Camellia sinensis var. sinensis HOM05D001673 ORTHO05D002312 1.2e-26 123.6 85 78.8
Cfa005234 Carpinus fangiana HOM05D001673 ORTHO05D002312 1.2e-26 123.6 85 76.5
Haze_02149 Corylus avellana HOM05D001673 ORTHO05D002312 1.2e-26 123.6 85 76.5
Lj3g0017227 Lotus japonicus HOM05D001673 ORTHO05D002312 1.6e-26 123.2 88 76.1
HanXRQChr04g0112351 Helianthus annuus HOM05D001673 ORTHO05D002312 2.0e-26 122.9 85 80.0
Manes.04G074400 Manihot esculenta HOM05D001673 ORTHO05D002312 2.0e-26 122.9 87 75.9
Potri.009G134300 Populus trichocarpa HOM05D001673 ORTHO05D002312 2.0e-26 122.9 87 74.7
Ah.01g022910 Amaranthus hybridus HOM05D001673 ORTHO05D002312 2.7e-26 122.5 86 77.9
Glyma.04G004000 Glycine max HOM05D001673 ORTHO05D002312 2.7e-26 122.5 88 76.1
CANSAT25G3273 Cannabis sativa HOM05D001673 ORTHO05D002312 5.9e-26 121.3 90 74.4
Cpa.g.sc37.145 Carica papaya HOM05D001673 ORTHO05D002312 5.9e-26 121.3 88 73.9
Lalb_Chr03g0025151 Lupinus albus HOM05D001673 ORTHO05D002312 7.7e-26 120.9 89 70.8
Potri.004G174700 Populus trichocarpa HOM05D001673 ORTHO05D002312 7.7e-26 120.9 87 73.6
Sabra04G0116500 Salix brachista HOM05D001673 ORTHO05D002312 7.7e-26 120.9 87 72.4
TAR625G0357 Trochodendron aralioides HOM05D001673 ORTHO05D002312 7.7e-26 120.9 88 72.7
EL10Ac9g21391 Beta vulgaris HOM05D001673 ORTHO05D002312 1.0e-25 120.6 85 77.6
Actinidia23588 Actinidia chinensis HOM05D001673 ORTHO05D002312 1.3e-25 120.2 87 75.9
Lj5C179T14 Lonicera japonica HOM05D001673 ORTHO05D002312 1.3e-25 120.2 88 77.3
DCAR_003166 Daucus carota HOM05D001673 ORTHO05D002312 1.7e-25 119.8 120 59.2
ATR0304G007 Amborella trichopoda HOM05D001673 ORTHO05D002312 2.2e-25 119.4 131 55.0
DCAR_022772 Daucus carota HOM05D001673 ORTHO05D002312 2.2e-25 119.4 89 74.2
DCAR_022773 Daucus carota HOM05D001673 ORTHO05D002312 2.2e-25 119.4 89 74.2
ClCG02G011880 Citrullus lanatus HOM05D001673 ORTHO05D002312 2.9e-25 119.0 116 60.3
MBI05_g23386_MAGBIO Magnolia biondii HOM05D001673 ORTHO05D002312 5.0e-25 118.2 88 73.9
Medtr4g073370 Medicago truncatula HOM05D001673 ORTHO05D002312 6.5e-25 117.9 86 75.6
PGR142G4388 Punica granatum HOM05D001673 ORTHO05D002312 6.5e-25 117.9 86 70.9
CsaV3_2G016050 Cucumis sativus L. HOM05D001673 ORTHO05D002312 8.5e-25 117.5 88 70.5
Oeu034968.3 Olea europaea HOM05D001673 ORTHO05D002312 1.1e-24 117.1 86 72.1
vmacro17354 Vaccinium macrocarpon HOM05D001673 ORTHO05D002312 1.1e-24 117.1 117 59.8
MSTRG.27643 Avicennia marina HOM05D001673 ORTHO05D002312 1.5e-24 116.7 84 73.8
Sed0004775 Sechium edule HOM05D001673 ORTHO05D002312 1.9e-24 116.3 88 70.5
Lj9C393T4 Lonicera japonica HOM05D001673 ORTHO05D002312 2.5e-24 115.9 85 75.3
Ca_19064_v3 Cicer arietinum L. HOM05D001673 ORTHO05D002312 3.2e-24 115.5 85 75.3
Rhsim05G0060600 Rhododendron simsii HOM05D001673 ORTHO05D002312 3.2e-24 115.5 85 74.1
Solyc10g055450.2 Solanum lycopersicum HOM05D001673 ORTHO05D002312 4.2e-24 115.2 87 72.4
Sopen10g025230 Solanum pennellii HOM05D001673 ORTHO05D002312 4.2e-24 115.2 87 72.4
PGSC0003DMG401011946 Solanum tuberosum HOM05D001673 ORTHO05D002312 4.2e-24 115.2 87 72.4
MELO3C020814.2 Cucumis melo HOM05D001673 ORTHO05D002312 5.5e-24 114.8 88 69.3
Psat7g176160 Pisum sativum HOM05D001673 ORTHO05D002312 5.5e-24 114.8 84 73.8
Thhalv10024192m.g Eutrema salsugineum HOM05D001673 ORTHO05D002312 7.2e-24 114.4 88 68.2
AT4G38600 Arabidopsis thaliana HOM05D001673 ORTHO05D002312 9.4e-24 114.0 88 68.2
MSTRG.5450 Avicennia marina HOM05D001673 ORTHO05D002312 9.4e-24 114.0 89 70.8
Carub.0007s0047 Capsella rubella HOM05D001673 ORTHO05D002312 9.4e-24 114.0 88 67.0
CARHR294330 Cardamine hirsuta HOM05D001673 ORTHO05D002312 9.4e-24 114.0 88 67.0
Sp7g37170 Schrenkiella parvula HOM05D001673 ORTHO05D002312 9.4e-24 114.0 88 67.0
TPR.G39221 Trifolium pratense HOM05D001673 ORTHO05D002312 1.2e-23 113.6 84 75.0
AL7G10500 Arabidopsis lyrata HOM05D001673 ORTHO05D002312 2.1e-23 112.8 88 67.0
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-23 112.8 82 72.0
Lj1g0027642 Lotus japonicus HOM05D001673 ORTHO05D002312 2.1e-23 112.8 86 72.1
TAR376G0437 Trochodendron aralioides HOM05D001673 ORTHO05D013418 2.1e-23 112.8 87 70.1
TAR628G0375 Trochodendron aralioides HOM05D001673 ORTHO05D013418 2.1e-23 112.8 86 73.3
BcaNung01974 Brassica carinata HOM05D001673 ORTHO05D002312 4.7e-23 111.7 88 65.9
Sed0008816 Sechium edule HOM05D001673 ORTHO05D002312 4.7e-23 111.7 88 67.0
Glyma.06G003600 Glycine max HOM05D001673 ORTHO05D002312 1.0e-22 110.5 89 69.7
Nitab4.5_0007267g0030 Nicotiana tabacum HOM05D001673 ORTHO05D002312 1.0e-22 110.5 85 70.6
BcaC01g00239 Brassica carinata HOM05D001673 ORTHO05D002312 1.4e-22 110.2 88 64.8
C03p77170 Brassica napus HOM05D001673 ORTHO05D002312 1.4e-22 110.2 88 64.8
BolC3t19969H Brassica oleracea HOM05D001673 ORTHO05D002312 1.4e-22 110.2 88 64.8
Nitab4.5_0001889g0100 Nicotiana tabacum HOM05D001673 ORTHO05D002312 1.4e-22 110.2 85 71.8
A08p24140 Brassica napus HOM05D001673 ORTHO05D002312 1.8e-22 109.8 88 63.6
BraA08t34369Z Brassica rapa HOM05D001673 ORTHO05D002312 1.8e-22 109.8 88 63.6
Aa31LG6G16560 Aethionema arabicum HOM05D001673 ORTHO05D002312 2.3e-22 109.4 88 67.0
CDE05G2005 Ceratophyllum demersum HOM05D001673 ORTHO05D002312 2.3e-22 109.4 84 71.4
Peaxi162Scf00042g02521 Petunia axillaris HOM05D001673 ORTHO05D002312 2.3e-22 109.4 88 69.3
Duzib132G0795 Durio zibethinus HOM05D001673 ORTHO05D002312 6.8e-22 107.8 79 73.4
Dinv40117 Davidia involucrata HOM05D001673 ORTHO05D002312 8.8e-22 107.5 93 62.4
Ca_15305_v3 Cicer arietinum L. HOM05D001673 ORTHO05D002312 5.7e-21 104.8 88 67.0
Lalb_Chr01g0001851 Lupinus albus HOM05D001673 ORTHO05D002312 5.7e-21 104.8 89 67.4
VMungo1309G2569 Vigna mungo HOM05D001673 ORTHO05D002312 5.7e-21 104.8 92 65.2
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 1.7e-20 103.2 76 71.1
Phvul.009G119700 Phaseolus vulgaris HOM05D001673 ORTHO05D002312 6.3e-20 101.3 94 64.9
Mapoly0061s0046 Marchantia polymorpha HOM05D001673 ORTHO05D002312 8.3e-20 100.9 101 57.4
AagrBONN_evm.TU.Sc2ySwM_368.2663 Anthoceros agrestis HOM05D001673 ORTHO05D002312 1.1e-19 100.5 93 61.3
SEGI_13493 Sequoiadendron giganteum HOM05D001673 ORTHO05D013418 9.1e-19 97.4 82 67.1
SMO118G0088 Selaginella moellendorffii HOM05D001673 ORTHO05D002312 1.6e-18 96.7 116 51.7
Psat0s2358g0200 Pisum sativum HOM05D001673 ORTHO05D013418 2.0e-18 96.3 84 64.3
CAN.G1235.33 Capsicum annuum HOM05D001673 ORTHO05D013418 1.3e-17 93.6 84 60.7
CBR_g4741 Chara braunii HOM05D001673 ORTHO05D002312 2.3e-17 92.8 82 63.4
SEGI_16712 Sequoiadendron giganteum HOM05D001673 ORTHO05D002312 2.9e-17 92.4 94 58.5
CAN.G124.13 Capsicum annuum HOM05D001673 ORTHO05D013418 5.0e-17 91.7 126 48.4
CAN.G37.9 Capsicum annuum HOM05D001673 ORTHO05D013418 5.0e-17 91.7 126 48.4
Zm00001eb086710 Zea mays HOM05D001673 ORTHO05D002312 1.5e-16 90.1 107 51.4
GSVIVG01018731001 Vitis vinifera HOM05D001673 ORTHO05D002312 1.0e-14 84.0 82 56.1
Zm00001eb229270 Zea mays HOM05D001673 ORTHO05D002312 5.2e-14 81.6 80 57.5
ECA233G4585 Erigeron canadensis HOM05D001673 ORTHO05D002312 6.8e-14 81.3 89 52.8
CAN.G340.4 Capsicum annuum HOM05D001673 ORTHO05D013418 1.5e-13 80.1 68 61.8
Zm00001eb063630 Zea mays HOM05D001673 ORTHO05D013418 2.2e-12 76.3 77 55.8
SGA_v2.0_scaffold58G20376 Striga asiatica HOM05D001673 ORTHO05D002312 9.5e-08 60.8 126 37.3


User provided reference genes

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