Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.9e-176 622.5 328 100.0
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 2.9e-145 518.8 326 84.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 3.8e-145 518.5 328 83.5
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.2e-143 513.5 329 82.7
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.7e-135 485.0 328 81.1
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 4.0e-134 481.9 336 78.3
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 2.7e-130 469.2 307 79.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.3e-92 344.0 338 56.8
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 4.9e-92 342.0 333 57.7
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.4e-91 340.5 340 56.8
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 4.2e-91 339.0 337 57.3
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 4.2e-91 339.0 327 58.1
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 7.1e-91 338.2 335 58.2
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.2e-90 337.4 316 59.8
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 2.1e-90 336.7 344 57.6
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 7.9e-90 334.7 354 55.6
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.0e-89 334.3 311 58.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.3e-89 333.2 328 57.0
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.9e-89 332.4 340 57.6
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 6.6e-89 331.6 334 57.5
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.1e-88 330.9 342 52.9
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 3.3e-88 329.3 329 55.9
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.6e-88 328.6 330 58.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 9.6e-88 327.8 317 58.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 3.6e-87 325.9 332 55.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 8.1e-87 324.7 348 53.7
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 2.4e-86 323.2 332 55.1
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 5.3e-86 322.0 323 57.0
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 9.0e-86 321.2 326 57.1
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.6e-85 319.7 327 55.0
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 4.5e-85 318.9 315 58.4
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 4.5e-85 318.9 342 53.2
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 5.8e-85 318.5 341 54.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.8e-84 315.8 319 52.7
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 4.9e-84 315.5 336 53.0
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 6.4e-84 315.1 344 53.8
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.4e-83 313.9 315 55.2
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.4e-83 313.9 343 52.5
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.4e-83 313.9 340 55.0
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.9e-83 313.5 333 54.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.4e-83 313.2 343 52.8
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 4.6e-82 308.9 348 49.7
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 4.6e-82 308.9 364 48.4
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 6.0e-82 308.5 340 54.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.0e-81 307.8 318 55.3
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 2.3e-81 306.6 324 54.3
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.9e-81 305.8 306 55.6
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 3.9e-81 305.8 334 52.1
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.1e-81 305.4 314 55.7
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 5.1e-81 305.4 313 55.6
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.1e-80 304.3 309 56.6
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.5e-80 303.9 338 51.8
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 4.3e-80 302.4 337 53.4
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 5.6e-80 302.0 342 50.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 5.6e-80 302.0 322 55.9
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.6e-80 302.0 322 55.9
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 7.4e-80 301.6 328 51.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 7.4e-80 301.6 328 51.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 7.4e-80 301.6 322 51.9
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 7.4e-80 301.6 319 55.8
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 9.6e-80 301.2 320 52.5
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-79 300.1 319 56.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.1e-79 300.1 299 56.9
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 3.7e-79 299.3 327 52.9
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 4.8e-79 298.9 337 49.6
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 2.4e-78 296.6 340 52.4
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.4e-78 296.6 343 51.9
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 6.9e-78 295.0 345 49.6
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 9.0e-78 294.7 337 50.1
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.5e-77 293.9 348 49.7
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.5e-77 293.9 299 56.2
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 3.4e-77 292.7 341 49.9
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 4.5e-77 292.4 338 52.1
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.0e-76 291.2 438 43.8
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 4.9e-76 288.9 328 49.1
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 8.4e-76 288.1 328 48.5
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 1.1e-75 287.7 296 54.4
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 5.5e-75 285.4 316 50.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.5e-74 282.7 326 51.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 4.6e-74 282.3 333 50.5
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 6.7e-73 278.5 333 51.7
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 8.7e-73 278.1 333 52.0
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 4.3e-72 275.8 317 48.6
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 8.2e-71 271.6 347 45.8
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 1.8e-70 270.4 336 50.9
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.0e-69 266.9 368 46.7
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.4e-67 260.8 334 49.7
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.7e-66 256.5 243 58.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.8e-65 253.8 309 49.2
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 6.3e-63 245.4 250 54.0
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.8e-62 243.8 278 50.7
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 7.2e-59 231.9 401 38.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 9.7e-56 221.5 243 53.9
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.7e-50 203.4 441 36.1
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 1.2e-45 188.0 179 57.0
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.3e-41 173.7 219 51.1
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.1e-38 164.9 362 33.1
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.0e-36 158.3 135 60.7
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-35 154.8 288 39.2
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.3e-33 147.1 370 28.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 8.3e-31 138.7 219 43.4
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 6.1e-26 122.5 166 46.4
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 2.2e-23 114.0 98 61.2
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.4e-22 110.5 134 50.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 3.1e-22 110.2 458 24.0
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.2e-21 108.2 220 36.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.3e-20 104.0 71 74.6
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.5e-19 100.5 239 31.0
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.3e-19 99.8 103 51.5
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 4.3e-19 99.8 119 47.9
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 5.6e-19 99.4 73 69.9
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 8.9e-17 92.0 233 29.2
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 8.3e-15 85.5 71 62.0
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.8e-14 84.3 254 26.8
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.5e-11 74.7 60 66.7
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.5e-11 73.9 63 60.3
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.8e-10 70.5 55 69.1
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 8.0e-10 68.9 48 70.8
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.0e-09 68.6 50 68.0


User provided reference genes

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