Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.9e-256 887.9 533 100.0
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.7e-222 776.2 534 89.5
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 8.2e-222 773.9 534 89.1
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.4e-205 719.2 550 81.8
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.9e-173 613.2 540 75.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 5.5e-109 399.1 551 54.8
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 3.3e-106 389.8 552 54.2
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.5e-101 374.4 551 50.8
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.2e-101 373.2 544 52.6
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 3.0e-99 366.7 584 49.8
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.2e-98 364.8 554 51.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.5e-98 364.4 538 52.6
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.7e-97 360.9 538 52.4
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 2.4e-96 357.1 553 51.5
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.6e-95 354.4 538 50.7
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.0e-94 351.7 549 51.2
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 4.2e-93 346.3 550 50.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.0e-91 341.7 540 50.4
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 8.8e-91 338.6 551 50.5
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 9.8e-90 335.1 538 51.1
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.7e-89 334.3 545 50.6
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.8e-88 330.9 551 48.8
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.8e-88 330.9 600 47.7
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 2.4e-88 330.5 533 48.8
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.4e-88 329.3 543 49.7
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 5.4e-88 329.3 548 48.9
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 7.0e-88 328.9 564 51.4
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.7e-87 327.0 550 49.6
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.0e-86 325.1 555 48.6
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.3e-86 324.7 553 48.8
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 4.2e-85 319.7 548 49.3
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.8e-83 314.3 540 49.6
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.6e-82 310.5 546 49.8
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 3.4e-82 310.1 549 48.3
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.4e-82 310.1 543 50.1
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 3.4e-82 310.1 556 49.5
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 3.4e-82 310.1 546 46.7
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.2e-80 303.5 549 47.9
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 9.2e-80 302.0 548 47.4
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.2e-79 301.6 534 50.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 2.7e-79 300.4 560 47.5
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.7e-79 300.4 538 47.6
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 2.3e-78 297.4 546 46.3
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.6e-78 295.4 513 50.7
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 3.1e-75 287.0 554 36.3
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.2e-74 285.0 544 47.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.5e-74 284.6 606 33.5
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.2e-73 280.8 545 47.3
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.1e-72 278.5 538 47.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.9e-72 277.7 552 44.4
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 7.0e-72 275.8 546 47.6
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.2e-71 275.0 431 40.8
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 3.5e-71 273.5 530 48.1
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 4.6e-71 273.1 530 46.4
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 4.6e-71 273.1 546 47.4
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.3e-70 270.8 440 41.4
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 3.0e-70 270.4 545 47.2
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 3.9e-70 270.0 536 48.1
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 6.6e-70 269.2 547 48.4
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 1.9e-69 267.7 427 40.3
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.2e-68 265.0 437 39.4
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 1.1e-67 261.9 543 47.9
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.1e-67 261.9 529 43.7
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.8e-67 261.2 528 44.5
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 3.1e-67 260.4 463 37.1
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 3.1e-67 260.4 532 46.2
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.8e-66 256.1 533 44.1
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 7.5e-66 255.8 442 40.5
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 3.7e-65 253.4 533 46.7
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 8.3e-65 252.3 531 43.7
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 4.1e-64 250.0 531 44.8
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 5.4e-64 249.6 531 47.1
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.6e-63 248.1 463 49.2
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.1e-63 247.7 529 42.5
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.1e-63 247.7 531 43.5
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.3e-62 245.0 531 46.3
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 1.3e-62 245.0 519 47.2
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.7e-62 244.6 532 43.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 3.0e-62 243.8 531 43.3
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 3.0e-62 243.8 530 45.5
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.1e-61 241.9 530 44.2
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 7.3e-61 239.2 535 43.4
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 7.3e-61 239.2 536 44.2
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.4e-59 235.0 388 38.7
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 1.3e-57 228.4 549 40.6
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 1.7e-54 218.0 345 39.4
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.0e-54 217.2 125 88.0
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 3.1e-43 180.6 431 44.8
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 3.1e-43 180.6 529 38.6
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 5.3e-43 179.9 384 33.9
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 2.4e-40 171.0 540 40.6
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.2e-39 168.7 409 45.7
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.7e-38 164.9 544 31.4
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.1e-37 162.2 431 30.4
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.8e-35 154.8 149 55.7
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.9e-32 144.8 425 29.4
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.3e-28 132.1 348 31.3
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 8.7e-22 109.4 215 35.3
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 6.3e-20 103.2 84 61.9
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.0e-17 93.6 193 35.2
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.2e-15 89.0 209 32.5
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 3.3e-13 80.9 73 50.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.2e-12 78.2 307 28.7
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.2e-12 78.2 170 35.3
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 2.8e-12 77.8 428 23.6
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.4e-11 75.5 46 73.9
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 2.3e-06 58.2 307 24.1


User provided reference genes

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