Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.8e-88 328.6 162 100.0
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.1e-79 300.1 160 90.6
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.1e-76 290.0 163 90.2
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.9e-76 289.3 160 86.9
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 4.2e-76 288.1 163 89.6
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.2e-76 288.1 163 89.0
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.1e-65 253.4 138 87.0
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 9.0e-63 243.8 137 85.4
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 3.3e-57 225.3 156 70.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 4.3e-57 224.9 157 70.1
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.3e-56 223.4 156 69.2
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 1.1e-55 220.3 142 72.5
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.1e-55 220.3 146 71.9
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.4e-55 219.9 157 69.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.1e-55 218.8 163 68.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 9.0e-55 217.2 156 68.6
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 2.0e-54 216.1 147 72.1
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.0e-54 216.1 155 71.0
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.6e-54 215.7 156 67.9
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 3.4e-54 215.3 161 64.6
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 3.4e-54 215.3 161 68.3
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 4.5e-54 214.9 189 59.8
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 4.5e-54 214.9 156 67.9
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 5.9e-54 214.5 138 71.0
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 7.6e-54 214.2 149 70.5
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 3.8e-53 211.8 139 70.5
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 5.0e-53 211.5 161 67.1
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 5.0e-53 211.5 167 64.7
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 8.4e-53 210.7 155 67.1
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 1.1e-52 210.3 156 67.9
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.1e-52 210.3 158 68.4
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.4e-52 209.9 148 68.9
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.9e-52 209.5 148 68.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 2.5e-52 209.1 153 62.7
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.5e-52 209.1 161 66.5
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 9.3e-52 207.2 153 66.0
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 9.3e-52 207.2 158 65.2
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.2e-51 206.8 148 67.6
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.2e-51 206.8 147 68.0
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.6e-51 206.5 147 66.0
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 2.1e-51 206.1 155 63.9
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 4.6e-51 204.9 149 63.8
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 6.1e-51 204.5 153 65.4
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 6.1e-51 204.5 160 63.8
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 6.1e-51 204.5 156 67.3
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.0e-50 203.8 144 68.1
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.0e-50 203.8 164 59.1
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 1.8e-50 203.0 149 63.1
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.8e-50 203.0 157 65.0
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 2.3e-50 202.6 149 63.8
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 3.0e-50 202.2 154 63.6
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 5.1e-50 201.4 155 65.2
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 8.7e-50 200.7 150 62.0
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.1e-49 200.3 138 71.7
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.1e-49 200.3 143 69.2
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.9e-49 199.5 154 61.0
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.3e-49 198.7 150 62.7
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.3e-49 198.7 151 64.2
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 4.3e-49 198.4 163 60.7
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 7.4e-49 197.6 151 66.9
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 9.7e-49 197.2 161 61.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.2e-48 196.1 150 62.0
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.2e-48 196.1 150 62.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.2e-48 196.1 139 69.8
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.2e-48 196.1 156 64.7
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 2.8e-48 195.7 150 62.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 6.3e-48 194.5 146 65.8
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 8.2e-48 194.1 153 61.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 6.9e-47 191.0 155 63.2
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 2.6e-46 189.1 142 62.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 3.4e-46 188.7 206 50.5
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 5.9e-46 188.0 163 57.7
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 7.7e-46 187.6 160 60.6
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 6.5e-45 184.5 152 60.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 9.4e-44 180.6 150 58.0
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.2e-43 180.3 173 54.9
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.7e-43 179.1 139 61.9
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 4.6e-43 178.3 159 57.2
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 6.1e-43 177.9 157 58.6
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.0e-42 177.2 129 65.9
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.4e-42 176.8 141 60.3
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.4e-42 176.8 156 58.3
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 6.7e-42 174.5 151 60.3
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 2.0e-30 136.3 128 53.1
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.6e-30 136.0 137 49.6
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 2.2e-29 132.9 111 55.0
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 3.6e-27 125.6 78 79.5
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 4.0e-26 122.1 137 43.8
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 3.3e-25 119.0 140 45.0
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 9.7e-25 117.5 124 50.0
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 6.3e-24 114.8 93 65.6
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 5.7e-17 91.7 71 63.4
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 8.3e-16 87.8 115 46.1
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 8.3e-16 87.8 106 44.3
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 7.0e-15 84.7 115 45.2
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.2e-14 84.0 63 60.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 5.5e-12 75.1 64 54.7


User provided reference genes

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