Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G282.35 Capsicum annuum HOM05D008195 ORTHO05D010950 9.7e-79 296.6 134 100.0
CAN.G479.7 Capsicum annuum HOM05D008195 ORTHO05D010950 2.0e-28 129.4 72 84.7
CAN.G675.32 Capsicum annuum HOM05D008195 ORTHO05D010950 7.3e-26 120.9 60 90.0
PGSC0003DMG400024640 Solanum tuberosum HOM05D008195 ORTHO05D000743 1.2e-20 103.6 60 76.7
Solyc03g115160.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.6e-20 103.2 59 78.0
Sopen03g034220 Solanum pennellii HOM05D008195 ORTHO05D000743 1.6e-20 103.2 59 78.0
PGSC0003DMG400041231 Solanum tuberosum HOM05D008195 ORTHO05D010950 6.0e-20 101.3 60 76.7
Solyc01g010500.3 Solanum lycopersicum HOM05D001818 ORTHO05D001780 2.1e-17 92.8 59 72.9
PGSC0003DMG400016768 Solanum tuberosum HOM05D008195 ORTHO05D010950 2.8e-17 92.4 65 66.2
CAN.G1228.30 Capsicum annuum HOM05D008195 ORTHO05D010950 8.1e-17 90.9 87 54.0
CAN.G111.39 Capsicum annuum HOM05D008195 ORTHO05D000743 4.0e-16 88.6 60 66.7
PGSC0003DMG401020463 Solanum tuberosum HOM05D008195 ORTHO05D010950 5.2e-16 88.2 60 70.0
PGSC0003DMG400035870 Solanum tuberosum HOM05D008195 ORTHO05D010950 8.9e-16 87.4 60 68.3
Sopen06g024520 Solanum pennellii HOM05D008195 ORTHO05D010950 3.4e-15 85.5 60 70.0
Solyc06g066200.2 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.7e-14 83.2 59 67.8
Sopen06g024610 Solanum pennellii HOM05D008195 ORTHO05D000743 4.9e-14 81.6 60 65.0
PGSC0003DMG400037001 Solanum tuberosum HOM05D008195 ORTHO05D000743 4.9e-14 81.6 89 48.3
Sopen06g021820 Solanum pennellii HOM05D008195 ORTHO05D000743 6.4e-14 81.3 59 66.1
PGSC0003DMG400020472 Solanum tuberosum HOM05D008195 ORTHO05D000743 1.1e-13 80.5 60 65.0
Nitab4.5_0007689g0050 Nicotiana tabacum HOM05D008195 ORTHO05D000743 3.2e-13 79.0 60 65.0
Nitab4.5_0001485g0150 Nicotiana tabacum HOM05D008195 ORTHO05D000743 9.2e-13 77.4 60 65.0
Solyc06g066140.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.6e-12 76.6 60 60.0
Peaxi162Scf00201g00235 Petunia axillaris HOM05D008195 ORTHO05D000743 4.6e-12 75.1 58 62.1
Sopen06g021660 Solanum pennellii HOM05D000006 ORTHO05D000001 1.3e-11 73.6 60 55.0
PGSC0003DMG400023177 Solanum tuberosum HOM05D008195 ORTHO05D010950 1.7e-11 73.2 54 61.1
Solyc06g066360.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 3.9e-11 72.0 60 53.3
PGSC0003DMG400026134 Solanum tuberosum HOM05D008195 ORTHO05D000743 5.1e-11 71.6 60 60.0
Sopen06g024280 Solanum pennellii HOM05D008195 ORTHO05D000743 6.6e-11 71.2 54 61.1
Solyc03g115180.3 Solanum lycopersicum HOM05D008195 ORTHO05D000743 1.9e-10 69.7 60 53.3
Dinv22785 Davidia involucrata HOM05D001093 ORTHO05D000743 1.1e-08 63.9 70 44.3
SGA_v2.0_scaffold313G48311 Striga asiatica HOM05D001093 ORTHO05D000743 1.1e-08 63.9 61 47.5
CAN.G479.4 Capsicum annuum HOM05D008195 ORTHO05D000743 1.8e-08 63.2 46 63.0
Oeu047262.2 Olea europaea HOM05D001093 ORTHO05D000743 2.0e-07 59.7 59 49.2
SalBow5G5623 Salvia bowleyana HOM05D001093 ORTHO05D000743 5.8e-07 58.2 60 46.7
Dinv17406 Davidia involucrata HOM05D001093 ORTHO05D000743 7.6e-07 57.8 53 47.2
vmacro16499 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 7.6e-07 57.8 60 43.3
Actinidia16122 Actinidia chinensis HOM05D001093 ORTHO05D000743 1.3e-06 57.0 96 33.3
Cc00_g03840 Coffea canephora HOM05D001093 ORTHO05D000743 1.3e-06 57.0 43 53.5
CSS0005519 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 2.9e-06 55.8 60 40.0
vmacro17606 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 4.9e-06 55.1 68 39.7


User provided reference genes

Program Settings