Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G28.9 Capsicum annuum HOM05D001877 ORTHO05D115295 1.4e-90 336.3 165 100.0
CAN.G475.24 Capsicum annuum HOM05D001877 ORTHO05D001886 3.0e-37 159.1 178 52.2
Solyc04g076350.1 Solanum lycopersicum HOM05D001877 ORTHO05D001886 1.5e-36 156.8 194 48.5
Sopen00g008090 Solanum pennellii HOM05D001877 ORTHO05D001886 1.9e-36 156.4 185 49.7
PGSC0003DMG400009359 Solanum tuberosum HOM05D001877 ORTHO05D001886 4.3e-36 155.2 194 47.9
Nitab4.5_0000131g0230 Nicotiana tabacum HOM05D001877 ORTHO05D001886 1.1e-31 140.6 149 53.0
Nitab4.5_0005913g0010 Nicotiana tabacum HOM05D001877 ORTHO05D001886 1.9e-31 139.8 150 52.0
Peaxi162Scf00454g00037 Petunia axillaris HOM05D001877 ORTHO05D001886 9.6e-28 127.5 156 48.1
DCAR_009559 Daucus carota HOM05D001877 ORTHO05D001886 2.4e-10 69.7 107 40.2
PSO170G1558 Papaver somniferum HOM05D001877 ORTHO05D001886 1.5e-09 67.0 87 43.7
PSO210G5358 Papaver somniferum HOM05D001877 ORTHO05D001886 1.5e-09 67.0 87 43.7
Cc10_g15910 Coffea canephora HOM05D001877 ORTHO05D001886 2.6e-09 66.2 62 51.6
Duzib116G0851 Durio zibethinus HOM05D001877 ORTHO05D001886 1.3e-08 63.9 87 41.4
arahy.Tifrunner.gnm1.ann1.Z51FA8 Arachis hypogaea HOM05D001877 ORTHO05D001886 1.7e-08 63.5 60 55.0
BcaC04g22120 Brassica carinata HOM05D001877 ORTHO05D001886 1.7e-08 63.5 95 35.8
C09p23130 Brassica napus HOM05D001877 ORTHO05D001886 1.7e-08 63.5 95 35.8
BcaC09g49500 Brassica carinata HOM05D001877 ORTHO05D001886 2.2e-08 63.2 156 28.8
C01p35840 Brassica napus HOM05D001877 ORTHO05D001886 2.2e-08 63.2 156 28.8
BolC1t03545H Brassica oleracea HOM05D001877 ORTHO05D001886 2.2e-08 63.2 156 28.8
Ca_05440_v3 Cicer arietinum L. HOM05D001877 ORTHO05D001886 2.2e-08 63.2 55 54.5
Medtr5g066340 Medicago truncatula HOM05D001877 ORTHO05D001886 2.2e-08 63.2 55 54.5
AL2G18180 Arabidopsis lyrata HOM05D001877 ORTHO05D001886 3.8e-08 62.4 178 27.0
Psat2g065440 Pisum sativum HOM05D001877 ORTHO05D001886 3.8e-08 62.4 55 54.5
A09p18520 Brassica napus HOM05D001877 ORTHO05D001886 4.9e-08 62.0 164 28.7
A01p28290 Brassica napus HOM05D001877 ORTHO05D001886 6.5e-08 61.6 135 29.6
BraA01t02958Z Brassica rapa HOM05D001877 ORTHO05D001886 6.5e-08 61.6 57 49.1
AT1G58215 Arabidopsis thaliana HOM05D001877 ORTHO05D001886 8.4e-08 61.2 57 50.9
Carub.0002s0639 Capsella rubella HOM05D001877 ORTHO05D001886 8.4e-08 61.2 57 50.9
CARHR053800 Cardamine hirsuta HOM05D001877 ORTHO05D001886 8.4e-08 61.2 57 50.9
Thecc.08G071100 Theobroma cacao HOM05D001877 ORTHO05D001886 8.4e-08 61.2 125 36.0
TPR.G34710 Trifolium pratense HOM05D001877 ORTHO05D001886 8.4e-08 61.2 55 52.7
CSS0024127 Camellia sinensis var. sinensis HOM05D001877 ORTHO05D001886 1.1e-07 60.8 81 39.5
CSS0041038 Camellia sinensis var. sinensis HOM05D001877 ORTHO05D001886 1.1e-07 60.8 81 39.5
Duzib093G0209 Durio zibethinus HOM05D001877 ORTHO05D001886 1.1e-07 60.8 87 40.2
Glyma.02G214500 Glycine max HOM05D001877 ORTHO05D001886 1.1e-07 60.8 55 52.7
Rhsim07G0212000 Rhododendron simsii HOM05D001877 ORTHO05D001886 1.1e-07 60.8 154 31.2
Sp2g05410 Schrenkiella parvula HOM05D001877 ORTHO05D001886 1.1e-07 60.8 57 49.1
Thhalv10023956m.g Eutrema salsugineum HOM05D001877 ORTHO05D001886 1.4e-07 60.5 95 33.7
LjContig00408g0026946 Lotus japonicus HOM05D001877 ORTHO05D001886 1.4e-07 60.5 50 58.0
Lalb_Chr04g0252821 Lupinus albus HOM05D001877 ORTHO05D001886 1.4e-07 60.5 49 59.2
Lalb_Chr11g0064961 Lupinus albus HOM05D001877 ORTHO05D001886 1.9e-07 60.1 55 54.5
Rhsim08G0016600 Rhododendron simsii HOM05D001877 ORTHO05D001886 1.9e-07 60.1 161 30.4
Aa31LG2G10930 Aethionema arabicum HOM05D001877 ORTHO05D001886 2.5e-07 59.7 95 33.7
HanXRQChr04g0111461 Helianthus annuus HOM05D001877 ORTHO05D001886 2.5e-07 59.7 56 51.8
Gohir.D06G031301 Gossypium hirsutum HOM05D001877 ORTHO05D001886 3.2e-07 59.3 92 33.7
Gorai.010G034500 Gossypium raimondii HOM05D001877 ORTHO05D001886 3.2e-07 59.3 92 33.7
SHI20375 Sapria himalayana HOM05D001877 ORTHO05D001886 3.2e-07 59.3 83 37.3
vmacro18557 Vaccinium macrocarpon HOM05D001877 ORTHO05D001886 3.2e-07 59.3 55 52.7
Glyma.14G182000 Glycine max HOM05D001877 ORTHO05D001886 4.2e-07 58.9 89 39.3
Sabra02G0083700 Salix brachista HOM05D001877 ORTHO05D001886 4.2e-07 58.9 116 33.6
VMungo0647G2357 Vigna mungo HOM05D001877 ORTHO05D001886 4.2e-07 58.9 55 52.7
Lalb_Chr17g0344561 Lupinus albus HOM05D001877 ORTHO05D001886 5.5e-07 58.5 55 50.9
TAR625G0907 Trochodendron aralioides HOM05D001877 ORTHO05D001886 5.5e-07 58.5 55 49.1
Gorai.002G139100 Gossypium raimondii HOM05D001877 ORTHO05D001886 7.1e-07 58.2 180 28.3
TWI56G0012 Tripterygium wilfordii HOM05D001877 ORTHO05D001886 7.1e-07 58.2 60 48.3
Atru.chr13.1007 Acer truncatum HOM05D001877 ORTHO05D001886 9.3e-07 57.8 56 48.2
AL1G20270 Arabidopsis lyrata HOM05D001877 ORTHO05D001886 9.3e-07 57.8 63 44.4
Nn1g05579 Nelumbo nucifera HOM05D001877 ORTHO05D001886 9.3e-07 57.8 55 49.1
SalBow3G1258 Salvia bowleyana HOM05D001877 ORTHO05D001886 9.3e-07 57.8 55 49.1
Sp1g08310 Schrenkiella parvula HOM05D001877 ORTHO05D001886 9.3e-07 57.8 63 44.4
A06p06400 Brassica napus HOM05D001877 ORTHO05D001886 1.2e-06 57.4 64 42.2
C05p07800 Brassica napus HOM05D001877 ORTHO05D001886 1.2e-06 57.4 64 42.2
BolC5t29531H Brassica oleracea HOM05D001877 ORTHO05D001886 1.2e-06 57.4 64 42.2
BraA06t23851Z Brassica rapa HOM05D001877 ORTHO05D001886 1.2e-06 57.4 64 42.2
Thhalv10009464m.g Eutrema salsugineum HOM05D001877 ORTHO05D001886 1.2e-06 57.4 130 30.8
Actinidia24559 Actinidia chinensis HOM05D001877 ORTHO05D001886 1.6e-06 57.0 83 41.0
Carub.0001s0906 Capsella rubella HOM05D001877 ORTHO05D001886 1.6e-06 57.0 63 42.9
Cpa.g.sc21.25 Carica papaya HOM05D001877 ORTHO05D001886 1.6e-06 57.0 117 35.9
Gohir.A01G126550 Gossypium hirsutum HOM05D001877 ORTHO05D001886 1.6e-06 57.0 169 26.0
Lj4A737T60 Lonicera japonica HOM05D001877 ORTHO05D001886 1.6e-06 57.0 62 46.8
PGR031G2648 Punica granatum HOM05D001877 ORTHO05D001886 1.6e-06 57.0 101 34.7
COL.COLO4_35251 Corchorus olitorius HOM05D001877 ORTHO05D001886 2.1e-06 56.6 87 39.1
Lj4A717G29 Lonicera japonica HOM05D001877 ORTHO05D001886 2.1e-06 56.6 55 50.9
Actinidia28823 Actinidia chinensis HOM05D001877 ORTHO05D001886 2.7e-06 56.2 55 52.7
AT1G09720 Arabidopsis thaliana HOM05D001877 ORTHO05D001886 2.7e-06 56.2 63 42.9
MELO3C003522.2 Cucumis melo HOM05D001877 ORTHO05D001886 2.7e-06 56.2 55 49.1
Potri.002G106400 Populus trichocarpa HOM05D001877 ORTHO05D001886 2.7e-06 56.2 114 34.2
Sc03g0000370 Simmondsia chinensis HOM05D001877 ORTHO05D001886 2.7e-06 56.2 111 31.5
MBI16_g27576_MAGBIO Magnolia biondii HOM05D001877 ORTHO05D001886 3.5e-06 55.8 56 46.4
Aa31LG1G5270 Aethionema arabicum HOM05D001877 ORTHO05D001886 4.6e-06 55.5 57 42.1
Manes.02G144700 Manihot esculenta HOM05D001877 ORTHO05D001886 4.6e-06 55.5 89 36.0
Phvul.008G182000 Phaseolus vulgaris HOM05D001877 ORTHO05D001886 4.6e-06 55.5 55 49.1
vmacro04650 Vaccinium macrocarpon HOM05D001877 ORTHO05D001886 4.6e-06 55.5 61 42.6
CARHR009690 Cardamine hirsuta HOM05D001877 ORTHO05D001886 7.9e-06 54.7 63 41.3
Cfa006879 Carpinus fangiana HOM05D001877 ORTHO05D001886 7.9e-06 54.7 81 39.5
VMungo0251G2689 Vigna mungo HOM05D001877 ORTHO05D001886 7.9e-06 54.7 119 30.3


User provided reference genes

Program Settings