Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G277.1 Capsicum annuum HOM05D001081 ORTHO05D024763 3.6e-129 464.9 236 100.0
CAN.G481.14 Capsicum annuum HOM05D001081 ORTHO05D004708 7.7e-63 244.6 220 65.5
Solyc03g083130.3 Solanum lycopersicum HOM05D001081 ORTHO05D004708 2.1e-44 183.3 214 55.1
Sopen03g022900 Solanum pennellii HOM05D001081 ORTHO05D004708 2.1e-44 183.3 214 55.1
CAN.G39.28 Capsicum annuum HOM05D001081 ORTHO05D024763 1.0e-43 181.0 148 66.2
Nitab4.5_0000548g0110 Nicotiana tabacum HOM05D001081 ORTHO05D004708 7.5e-42 174.9 223 50.2
Peaxi162Scf00740g00138 Petunia axillaris HOM05D001081 ORTHO05D004708 1.7e-41 173.7 239 47.3
Cfa016233 Carpinus fangiana HOM05D001081 ORTHO05D004708 6.8e-19 98.6 107 49.5
Dinv35339 Davidia involucrata HOM05D001081 ORTHO05D004708 2.6e-18 96.7 113 50.4
QL09p008772 Quercus lobata HOM05D001081 ORTHO05D004708 4.4e-18 95.9 201 32.8
QL09p008909 Quercus lobata HOM05D001081 ORTHO05D004708 4.4e-18 95.9 201 32.8
TAR375G0280 Trochodendron aralioides HOM05D001081 ORTHO05D004708 5.8e-18 95.5 200 34.5
CSS0032097 Camellia sinensis var. sinensis HOM05D001081 ORTHO05D004708 1.7e-17 94.0 181 34.8
Lj1C1018T17 Lonicera japonica HOM05D001081 ORTHO05D004708 4.9e-17 92.4 181 36.5
Sopen03g019390 Solanum pennellii HOM05D001081 ORTHO05D024763 4.9e-17 92.4 106 56.6
Nitab4.5_0006933g0030 Nicotiana tabacum HOM05D001081 ORTHO05D004708 6.4e-17 92.0 169 38.5
GSVIVG01038555001 Vitis vinifera HOM05D001081 ORTHO05D004708 1.4e-16 90.9 98 52.0
Lj1C1020T7 Lonicera japonica HOM05D001081 ORTHO05D004708 1.9e-16 90.5 182 35.2
CANSAT21G0069 Cannabis sativa HOM05D001081 ORTHO05D004708 2.4e-16 90.1 98 50.0
Nn1g00260 Nelumbo nucifera HOM05D001081 ORTHO05D004708 7.1e-16 88.6 108 44.4
Ciclev10018477m.g Citrus clementina HOM05D001081 ORTHO05D004708 1.2e-15 87.8 107 43.9
vmacro22638 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.2e-15 87.8 145 36.6
Manes.01G183500 Manihot esculenta HOM05D001081 ORTHO05D004708 1.6e-15 87.4 106 46.2
vmacro06386 Vaccinium macrocarpon HOM05D001081 ORTHO05D004708 1.6e-15 87.4 179 32.4
Hma1.2p1_0404F.1_g145360 Hydrangea macrophylla HOM05D001081 ORTHO05D004708 2.1e-15 87.0 112 48.2
Potri.012G016100 Populus trichocarpa HOM05D001081 ORTHO05D004708 2.1e-15 87.0 107 44.9
TWI39G0445 Tripterygium wilfordii HOM05D001081 ORTHO05D004708 2.1e-15 87.0 107 42.1
COL.COLO4_16768 Corchorus olitorius HOM05D001081 ORTHO05D004708 6.0e-15 85.5 107 43.0
Oeu041052.4 Olea europaea HOM05D001081 ORTHO05D004708 7.8e-15 85.1 107 43.0
Rhsim03G0209100 Rhododendron simsii HOM05D001081 ORTHO05D004708 1.3e-14 84.3 179 32.4
Thecc.03G199500 Theobroma cacao HOM05D001081 ORTHO05D004708 6.6e-14 82.0 107 43.0
Eucgr.G00091 Eucalyptus grandis HOM05D001081 ORTHO05D004708 8.6e-14 81.6 100 45.0
Gohir.A11G015200 Gossypium hirsutum HOM05D001081 ORTHO05D004708 1.1e-13 81.3 107 41.1
DCAR_008928 Daucus carota HOM05D001081 ORTHO05D004708 1.9e-13 80.5 223 28.3
Eucgr.G00110 Eucalyptus grandis HOM05D001081 ORTHO05D004708 1.9e-13 80.5 100 44.0
Migut.F00209 Erythranthe guttata HOM05D001081 ORTHO05D004708 2.5e-13 80.1 107 43.0
Gohir.D11G015300 Gossypium hirsutum HOM05D001081 ORTHO05D004708 3.3e-13 79.7 107 41.1
Aqoxy3G00072 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 4.3e-13 79.3 107 45.8
Cpa.g.sc3.89 Carica papaya HOM05D001081 ORTHO05D004708 5.6e-13 79.0 98 45.9
Psat6g034720 Pisum sativum HOM05D001081 ORTHO05D004708 5.6e-13 79.0 108 38.0
Eucgr.H05019 Eucalyptus grandis HOM05D001081 ORTHO05D004708 7.3e-13 78.6 100 44.0
Eucgr.K00385 Eucalyptus grandis HOM05D001081 ORTHO05D004708 9.5e-13 78.2 99 43.4
Lj4g0008522 Lotus japonicus HOM05D001081 ORTHO05D004708 9.5e-13 78.2 107 40.2
Sabra12G0016000 Salix brachista HOM05D001081 ORTHO05D004708 9.5e-13 78.2 107 41.1
Atru.chr12.2203 Acer truncatum HOM05D001081 ORTHO05D004708 2.1e-12 77.0 107 38.3
Actinidia08651 Actinidia chinensis HOM05D001081 ORTHO05D004708 2.1e-12 77.0 107 42.1
TPR.G12082 Trifolium pratense HOM05D001081 ORTHO05D004708 2.8e-12 76.6 108 39.8
AL6G35710 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 3.6e-12 76.3 107 39.3
Gorai.007G015700 Gossypium raimondii HOM05D001081 ORTHO05D004708 3.6e-12 76.3 107 41.1
Sabra11G0071600 Salix brachista HOM05D001081 ORTHO05D004708 3.6e-12 76.3 106 39.6
EL10Ac3g05278 Beta vulgaris HOM05D001081 ORTHO05D004708 4.7e-12 75.9 107 39.3
AUR62006087 Chenopodium quinoa HOM05D001081 ORTHO05D004708 4.7e-12 75.9 164 34.1
DCAR_008935 Daucus carota HOM05D001081 ORTHO05D004708 4.7e-12 75.9 194 29.9
Ca_12793_v3 Cicer arietinum L. HOM05D001081 ORTHO05D004708 6.2e-12 75.5 108 38.0
Hund21007 Selenicereus undatus HOM05D001081 ORTHO05D004708 6.2e-12 75.5 107 38.3
Thhalv10003513m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 1.1e-11 74.7 107 39.3
THA.LOC104798901 Tarenaya hassleriana HOM05D001081 ORTHO05D004708 2.3e-11 73.6 106 39.6
AT5G24275 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 3.1e-11 73.2 108 39.8
RcHm_v2.0_Chr1g0380531 Rosa chinensis HOM05D001081 ORTHO05D004708 3.1e-11 73.2 105 39.0
FvH4_7g31550 Fragaria vesca HOM05D001081 ORTHO05D004708 5.2e-11 72.4 103 40.8
Medtr1g008050 Medicago truncatula HOM05D001081 ORTHO05D004708 5.2e-11 72.4 108 38.0
BcaNung01800 Brassica carinata HOM05D001081 ORTHO05D004708 8.9e-11 71.6 118 37.3
Sp2g23080 Schrenkiella parvula HOM05D001081 ORTHO05D004708 8.9e-11 71.6 107 37.4
BcaNung01806 Brassica carinata HOM05D001081 ORTHO05D004708 1.5e-10 70.9 102 40.2
A06p35070 Brassica napus HOM05D001081 ORTHO05D004708 1.5e-10 70.9 107 37.4
C07p43530 Brassica napus HOM05D001081 ORTHO05D004708 1.5e-10 70.9 102 40.2
BolC7t44880H Brassica oleracea HOM05D001081 ORTHO05D004708 1.5e-10 70.9 102 40.2
BraA06t26428Z Brassica rapa HOM05D001081 ORTHO05D004708 1.5e-10 70.9 107 37.4
AT5G24280 Arabidopsis thaliana HOM05D001081 ORTHO05D004708 2.0e-10 70.5 107 36.4
FAN03G0095 Fragaria x ananassa HOM05D001081 ORTHO05D004708 2.6e-10 70.1 103 38.8
Thhalv10003512m.g Eutrema salsugineum HOM05D001081 ORTHO05D004708 4.4e-10 69.3 107 36.4
Carub.0006s2205 Capsella rubella HOM05D001081 ORTHO05D004708 5.8e-10 68.9 107 38.3
BraA06t26425Z Brassica rapa HOM05D001081 ORTHO05D004708 7.6e-10 68.6 102 38.2
HanXRQChr08g0225271 Helianthus annuus HOM05D001081 ORTHO05D003320 7.6e-10 68.6 95 40.0
Ah.07g205570 Amaranthus hybridus HOM05D001081 ORTHO05D004708 9.9e-10 68.2 103 41.7
CAN.G836.41 Capsicum annuum HOM05D005053 ORTHO05D024763 1.3e-09 67.8 73 57.5
Haze_00208 Corylus avellana HOM05D001081 ORTHO05D004708 1.3e-09 67.8 99 39.4
Medtr1g007990 Medicago truncatula HOM05D001081 ORTHO05D004708 1.3e-09 67.8 108 33.3
SGA_v2.0_scaffold192G40538 Striga asiatica HOM05D001081 ORTHO05D004708 2.2e-09 67.0 98 38.8
HanXRQChr08g0225331 Helianthus annuus HOM05D001081 ORTHO05D004708 2.9e-09 66.6 107 37.4
C07p43490 Brassica napus HOM05D001081 ORTHO05D004708 4.9e-09 65.9 107 36.4
BolC7t44875H Brassica oleracea HOM05D001081 ORTHO05D004708 4.9e-09 65.9 107 36.4
Solyc03g071810.1 Solanum lycopersicum HOM05D001081 ORTHO05D024763 4.9e-09 65.9 120 42.5
Aqoxy4G01595 Aquilegia oxysepala HOM05D001081 ORTHO05D004708 6.4e-09 65.5 107 36.4
MBI06_g13415_MAGBIO Magnolia biondii HOM05D001081 ORTHO05D004708 6.4e-09 65.5 107 38.3
CARHR189220 Cardamine hirsuta HOM05D001081 ORTHO05D004708 8.4e-09 65.1 107 40.2
CARHR189240 Cardamine hirsuta HOM05D001081 ORTHO05D004708 8.4e-09 65.1 107 39.3
AL6G35700 Arabidopsis lyrata HOM05D001081 ORTHO05D004708 1.1e-08 64.7 108 38.0
A06p35020 Brassica napus HOM05D001081 ORTHO05D004708 2.4e-08 63.5 102 38.2
Carub.0006s2203 Capsella rubella HOM05D001081 ORTHO05D004708 5.4e-08 62.4 107 37.4
BcaB01g02574 Brassica carinata HOM05D001081 ORTHO05D004708 4.6e-07 59.3 102 35.3
ECA233G5228 Erigeron canadensis HOM05D001081 ORTHO05D004708 6.0e-07 58.9 106 33.0
AagrBONN_evm.TU.Sc2ySwM_228.1615 Anthoceros agrestis HOM05D001081 ORTHO05D004708 6.6e-06 55.5 97 33.0
PSO781G0289 Papaver somniferum HOM05D001081 ORTHO05D004708 6.6e-06 55.5 104 35.6


User provided reference genes

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