Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G276.8 Capsicum annuum HOM05D001176 ORTHO05D003317 4.1e-93 344.7 177 100.0
Nitab4.5_0005208g0020 Nicotiana tabacum HOM05D001176 ORTHO05D003317 1.5e-26 123.6 101 67.3
Nitab4.5_0000132g0440 Nicotiana tabacum HOM05D001176 ORTHO05D003317 1.9e-26 123.2 101 66.3
CAN.G541.26 Capsicum annuum HOM05D001176 ORTHO05D003317 7.4e-26 121.3 80 78.8
PGSC0003DMG400028180 Solanum tuberosum HOM05D001176 ORTHO05D003317 1.6e-25 120.2 84 73.8
Sopen10g033240 Solanum pennellii HOM05D001176 ORTHO05D003317 3.7e-25 119.0 84 72.6
Solyc10g083790.3 Solanum lycopersicum HOM05D001176 ORTHO05D003317 4.8e-25 118.6 84 72.6
ClCG04G009570 Citrullus lanatus HOM05D001176 ORTHO05D003317 1.1e-24 117.5 130 53.8
MELO3C024495.2 Cucumis melo HOM05D001176 ORTHO05D003317 4.0e-24 115.5 84 71.4
CsaV3_6G040180 Cucumis sativus L. HOM05D001176 ORTHO05D003317 4.0e-24 115.5 84 71.4
Peaxi162Scf00110g00819 Petunia axillaris HOM05D001176 ORTHO05D003317 4.0e-24 115.5 80 73.8
Actinidia26638 Actinidia chinensis HOM05D001176 ORTHO05D003317 1.2e-23 114.0 84 70.2
CANSAT78G1928 Cannabis sativa HOM05D001176 ORTHO05D003317 1.2e-23 114.0 84 66.7
Cpa.g.sc5.131 Carica papaya HOM05D001176 ORTHO05D003317 1.2e-23 114.0 84 69.0
Manes.08G016300 Manihot esculenta HOM05D001176 ORTHO05D003317 1.2e-23 114.0 84 70.2
MSTRG.19204 Avicennia marina HOM05D001176 ORTHO05D003317 1.5e-23 113.6 84 69.0
Migut.J00470 Erythranthe guttata HOM05D001176 ORTHO05D003317 2.0e-23 113.2 84 67.9
SGA_v2.0_scaffold40G15455 Striga asiatica HOM05D003470 ORTHO05D003317 2.6e-23 112.8 85 68.2
GSVIVG01033707001 Vitis vinifera HOM05D001176 ORTHO05D003317 2.6e-23 112.8 84 69.0
Haze_19470 Corylus avellana HOM05D001176 ORTHO05D003317 3.4e-23 112.5 84 67.9
TPR.G22456 Trifolium pratense HOM05D001176 ORTHO05D003317 3.4e-23 112.5 84 70.2
Atru.chr8.1712 Acer truncatum HOM05D001176 ORTHO05D003317 5.8e-23 111.7 84 67.9
CiPaw.09G004700 Carya illinoinensis HOM05D001176 ORTHO05D003317 1.0e-22 110.9 84 66.7
CARHR162980 Cardamine hirsuta HOM05D001176 ORTHO05D003317 1.3e-22 110.5 84 67.9
Psat6g077400 Pisum sativum HOM05D001176 ORTHO05D003317 1.3e-22 110.5 80 72.5
Duzib106G0318 Durio zibethinus HOM05D001176 ORTHO05D003317 1.7e-22 110.2 84 66.7
QL07p041486 Quercus lobata HOM05D001176 ORTHO05D003317 1.7e-22 110.2 84 66.7
Ciclev10011420m.g Citrus clementina HOM05D001176 ORTHO05D003317 2.2e-22 109.8 84 65.5
Medtr1g062190 Medicago truncatula HOM05D001176 ORTHO05D003317 2.9e-22 109.4 84 69.0
Sp5g09190 Schrenkiella parvula HOM05D001176 ORTHO05D003317 2.9e-22 109.4 84 66.7
Sed0014925 Sechium edule HOM05D001176 ORTHO05D003317 2.9e-22 109.4 84 66.7
Aa31LG10G8300 Aethionema arabicum HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 65.5
AL5G34010 Arabidopsis lyrata HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 65.5
AT3G53130 Arabidopsis thaliana HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 65.5
Ca_11536_v3 Cicer arietinum L. HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 67.9
Dinv37353 Davidia involucrata HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 66.7
Thhalv10023482m.g Eutrema salsugineum HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 65.5
Gohir.D11G342200 Gossypium hirsutum HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 66.7
Gorai.007G372200 Gossypium raimondii HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 66.7
Thecc.05G074700 Theobroma cacao HOM05D001176 ORTHO05D003317 3.8e-22 109.0 84 66.7
Ah.15g091370 Amaranthus hybridus HOM05D001176 ORTHO05D003317 4.9e-22 108.6 101 58.4
Eucgr.A01599 Eucalyptus grandis HOM05D001176 ORTHO05D003317 4.9e-22 108.6 84 65.5
vmacro08803 Vaccinium macrocarpon HOM05D001176 ORTHO05D003317 4.9e-22 108.6 84 65.5
Carub.0005s1966 Capsella rubella HOM05D001176 ORTHO05D003317 6.5e-22 108.2 84 65.5
Cc06_g04720 Coffea canephora HOM05D001176 ORTHO05D003317 8.4e-22 107.8 84 65.5
BcaC08g44624 Brassica carinata HOM05D002585 ORTHO05D002917 1.1e-21 107.5 84 64.3
CDE02G4052 Ceratophyllum demersum HOM05D001176 ORTHO05D003317 1.1e-21 107.5 84 65.5
Glyma.13G147500 Glycine max HOM05D001176 ORTHO05D003317 1.1e-21 107.5 84 67.9
Oeu041470.1 Olea europaea HOM05D001176 ORTHO05D003317 1.1e-21 107.5 80 66.2
PGR004G1849 Punica granatum HOM05D001176 ORTHO05D003317 1.1e-21 107.5 84 65.5
Cfa016465 Carpinus fangiana HOM05D001176 ORTHO05D003317 1.4e-21 107.1 84 66.7
Glyma.10G062900 Glycine max HOM05D001176 ORTHO05D003317 1.4e-21 107.1 84 66.7
TAR623G0464 Trochodendron aralioides HOM05D001176 ORTHO05D003317 1.4e-21 107.1 84 64.3
DCAR_017658 Daucus carota HOM05D001176 ORTHO05D003317 1.9e-21 106.7 84 64.3
Sabra06G0094300 Salix brachista HOM05D001176 ORTHO05D003317 1.9e-21 106.7 84 66.7
TWI74G0518 Tripterygium wilfordii HOM05D001176 ORTHO05D003317 1.9e-21 106.7 84 64.3
VMungo0720G0039 Vigna mungo HOM05D001176 ORTHO05D003317 1.9e-21 106.7 84 66.7
arahy.Tifrunner.gnm1.ann1.12WBQG Arachis hypogaea HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 65.5
arahy.Tifrunner.gnm1.ann1.GLV5L5 Arachis hypogaea HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 65.5
EL10Ac7g16711 Beta vulgaris HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 64.3
AUR62026972 Chenopodium quinoa HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 61.9
Lsat_1_v5_gn_1_52661 Lactuca sativa HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 63.1
Potri.006G119800 Populus trichocarpa HOM05D001176 ORTHO05D003317 2.5e-21 106.3 84 66.7
BraA07t29827Z Brassica rapa HOM05D001176 ORTHO05D003317 3.2e-21 105.9 84 63.1
Thhalv10010267m.g Eutrema salsugineum HOM05D001176 ORTHO05D003317 3.2e-21 105.9 84 64.3
HanXRQChr01g0028241 Helianthus annuus HOM05D001176 ORTHO05D003317 3.2e-21 105.9 84 64.3
THA.LOC104818583 Tarenaya hassleriana HOM05D001176 ORTHO05D003317 3.2e-21 105.9 84 64.3
AUR62029077 Chenopodium quinoa HOM05D001176 ORTHO05D003317 4.2e-21 105.5 84 61.9
Gohir.A11G323100 Gossypium hirsutum HOM05D001176 ORTHO05D003317 4.2e-21 105.5 84 64.3
Nn2g13887 Nelumbo nucifera HOM05D001176 ORTHO05D003317 5.5e-21 105.1 84 65.5
ECA248G1435 Erigeron canadensis HOM05D001176 ORTHO05D003317 7.1e-21 104.8 84 63.1
RcHm_v2.0_Chr3g0471231 Rosa chinensis HOM05D001176 ORTHO05D003317 7.1e-21 104.8 84 63.1
Lj5g0025528 Lotus japonicus HOM05D001176 ORTHO05D003317 1.2e-20 104.0 84 65.5
Sc20g0005820 Simmondsia chinensis HOM05D001176 ORTHO05D003317 1.6e-20 103.6 84 63.1
HPP92_015168 Vanilla planifolia HOM05D001176 ORTHO05D003317 1.6e-20 103.6 84 64.3
MD14G1097800 Malus domestica HOM05D001176 ORTHO05D003317 2.7e-20 102.8 84 64.3
Phvul.007G226500 Phaseolus vulgaris HOM05D001176 ORTHO05D003317 2.7e-20 102.8 84 63.1
Prupe.7G123500 Prunus persica HOM05D001176 ORTHO05D003317 4.6e-20 102.1 84 63.1
PSO339G0330 Papaver somniferum HOM05D001176 ORTHO05D003317 7.9e-20 101.3 84 64.3
Aqoxy1G01043 Aquilegia oxysepala HOM05D001176 ORTHO05D003317 1.0e-19 100.9 84 63.1
FvH4_6g17140 Fragaria vesca HOM05D001176 ORTHO05D003317 2.3e-19 99.8 84 61.9
A07p21400 Brassica napus HOM05D001176 ORTHO05D003317 3.9e-19 99.0 79 62.0
C06p21010 Brassica napus HOM05D001176 ORTHO05D003317 3.9e-19 99.0 79 62.0
BolC6t37285H Brassica oleracea HOM05D001176 ORTHO05D003317 3.9e-19 99.0 79 62.0
FAN05G1696 Fragaria x ananassa HOM05D001176 ORTHO05D003317 5.1e-19 98.6 80 63.8
FAN05G2872 Fragaria x ananassa HOM05D001176 ORTHO05D003317 5.1e-19 98.6 80 63.8
Lalb_Chr21g0315241 Lupinus albus HOM05D001176 ORTHO05D003317 5.1e-19 98.6 84 64.3
SalBow3G1680 Salvia bowleyana HOM05D001176 ORTHO05D003317 5.1e-19 98.6 75 68.0
unitig_22.g5107 Utricularia gibba HOM05D001176 ORTHO05D003317 6.7e-19 98.2 83 60.2
COL.COLO4_22248 Corchorus olitorius HOM05D001176 ORTHO05D003317 3.3e-18 95.9 78 62.8
FAN02G1694 Fragaria x ananassa HOM05D001176 ORTHO05D003317 4.3e-18 95.5 80 62.5
FAN14G4971 Fragaria x ananassa HOM05D001176 ORTHO05D003317 4.3e-18 95.5 80 62.5
Os10g0546600 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D003317 5.7e-18 95.1 84 58.3
SEGI_25701 Sequoiadendron giganteum HOM05D001176 ORTHO05D003317 5.7e-18 95.1 85 57.6
MBI18_g19460_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D003317 9.6e-18 94.4 84 59.5
Mapoly0028s0136 Marchantia polymorpha HOM05D001176 ORTHO05D003317 2.1e-17 93.2 80 55.0
Lj3A994T59 Lonicera japonica HOM05D001176 ORTHO05D003317 2.8e-17 92.8 84 59.5
ATR0661G531 Amborella trichopoda HOM05D001176 ORTHO05D003317 6.2e-17 91.7 67 70.1
Pp3c6_15960 Physcomitrium patens HOM05D001176 ORTHO05D003317 6.2e-17 91.7 80 56.2
SMO276G0038 Selaginella moellendorffii HOM05D001176 ORTHO05D003317 1.0e-14 84.3 84 52.4
Rhsim04G0139400 Rhododendron simsii HOM05D001176 ORTHO05D003317 2.9e-14 82.8 50 76.0
Hma1.2p1_2774F.1_g328270 Hydrangea macrophylla HOM05D001176 ORTHO05D003317 1.3e-11 73.9 67 59.7
CBR_g21846 Chara braunii HOM05D001176 ORTHO05D003317 3.9e-11 72.4 86 46.5
CBR_g4469 Chara braunii HOM05D001176 ORTHO05D003317 3.9e-11 72.4 85 45.9
Pp3c5_28020 Physcomitrium patens HOM05D001176 ORTHO05D003317 2.8e-09 66.2 95 42.1
Mapoly0011s0135 Marchantia polymorpha HOM05D001176 ORTHO05D003317 6.3e-09 65.1 95 40.0
Cre08.g373100 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D003317 4.1e-08 62.4 90 41.1
CDE02G2271 Ceratophyllum demersum HOM05D001176 ORTHO05D003317 1.2e-07 60.8 78 43.6
MBI10_g09189_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D003317 3.4e-07 59.3 78 41.0
SMO351G0009 Selaginella moellendorffii HOM05D001176 ORTHO05D003317 4.5e-07 58.9 78 39.7
Carub.0001s3010 Capsella rubella HOM05D001176 ORTHO05D003317 5.9e-07 58.5 78 41.0
Ca_11539_v3 Cicer arietinum L. HOM05D001176 ORTHO05D003317 5.9e-07 58.5 42 64.3
MELO3C014945.2 Cucumis melo HOM05D001176 ORTHO05D003317 5.9e-07 58.5 78 41.0
Zm00001eb258960 Zea mays HOM05D001176 ORTHO05D003317 5.9e-07 58.5 78 41.0
CARHR031100 Cardamine hirsuta HOM05D001176 ORTHO05D003317 7.7e-07 58.2 78 41.0
CsaV3_3G007050 Cucumis sativus L. HOM05D001176 ORTHO05D003317 7.7e-07 58.2 78 41.0
THA.LOC104814399 Tarenaya hassleriana HOM05D001176 ORTHO05D003317 7.7e-07 58.2 78 41.0
HPP92_003369 Vanilla planifolia HOM05D001176 ORTHO05D003317 7.7e-07 58.2 78 43.6
GSVIVG01019158001 Vitis vinifera HOM05D001176 ORTHO05D003317 7.7e-07 58.2 78 42.3
Atru.chr12.2158 Acer truncatum HOM05D001176 ORTHO05D003317 1.0e-06 57.8 78 41.0
AL1G45870 Arabidopsis lyrata HOM05D001176 ORTHO05D003317 1.0e-06 57.8 78 41.0
AT1G31800 Arabidopsis thaliana HOM05D001176 ORTHO05D003317 1.0e-06 57.8 78 41.0
Thhalv10007138m.g Eutrema salsugineum HOM05D001176 ORTHO05D003317 1.0e-06 57.8 78 41.0
Sp1g27490 Schrenkiella parvula HOM05D001176 ORTHO05D003317 1.0e-06 57.8 78 41.0
CBR_g41079 Chara braunii HOM05D001176 ORTHO05D003317 1.3e-06 57.4 72 41.7
PGR031G1111 Punica granatum HOM05D001176 ORTHO05D003317 1.3e-06 57.4 78 41.0
BcaB04g18125 Brassica carinata HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 41.0
BcaC07g37726 Brassica carinata HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 41.0
A08p10400 Brassica napus HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 41.0
BolC8t48109H Brassica oleracea HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 41.0
BraA08t33039Z Brassica rapa HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 41.0
Os02g0817900 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D003317 1.7e-06 57.0 78 39.7
CANSAT11G0194 Cannabis sativa HOM05D001176 ORTHO05D003317 2.2e-06 56.6 78 39.7
HanXRQChr17g0559051 Helianthus annuus HOM05D001176 ORTHO05D003317 2.2e-06 56.6 78 41.0
PRCOL_00002320 Prasinoderma coloniale HOM05D001176 ORTHO05D003317 2.2e-06 56.6 62 51.6
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 2.9e-06 56.2 78 39.7
Cfa006301 Carpinus fangiana HOM05D001176 ORTHO05D003317 2.9e-06 56.2 78 39.7
Duzib128G0007 Durio zibethinus HOM05D001176 ORTHO05D003317 2.9e-06 56.2 78 42.3
Nn1g03127 Nelumbo nucifera HOM05D001176 ORTHO05D003317 2.9e-06 56.2 78 41.0
Sed0016380 Sechium edule HOM05D001176 ORTHO05D003317 2.9e-06 56.2 78 39.7
TAR362G0187 Trochodendron aralioides HOM05D001176 ORTHO05D003317 2.9e-06 56.2 78 41.0
ClCG10G008080 Citrullus lanatus HOM05D001176 ORTHO05D003317 3.8e-06 55.8 78 39.7
Dinv05894 Davidia involucrata HOM05D001176 ORTHO05D003317 3.8e-06 55.8 78 39.7
ECA238G4204 Erigeron canadensis HOM05D001176 ORTHO05D003317 3.8e-06 55.8 78 41.0
AagrBONN_evm.TU.Sc2ySwM_117.2586 Anthoceros agrestis HOM05D001176 ORTHO05D003317 5.0e-06 55.5 84 38.1
MCO10G170 Micromonas commoda HOM05D001176 ORTHO05D003317 5.0e-06 55.5 81 37.0
Nn3g19881 Nelumbo nucifera HOM05D001176 ORTHO05D003317 5.0e-06 55.5 76 40.8
RcHm_v2.0_Chr3g0448381 Rosa chinensis HOM05D001176 ORTHO05D003317 5.0e-06 55.5 78 39.7
ATR0088G045 Amborella trichopoda HOM05D001176 ORTHO05D003317 6.5e-06 55.1 76 40.8
Aqoxy2G03809 Aquilegia oxysepala HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 41.0
Cre02.g142266 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 34.6
Gohir.D13G159400 Gossypium hirsutum HOM05D001176 ORTHO05D003317 6.5e-06 55.1 76 40.8
Gorai.013G180200 Gossypium raimondii HOM05D001176 ORTHO05D003317 6.5e-06 55.1 76 40.8
Lj2C52G4 Lonicera japonica HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
MD12G1257000 Malus domestica HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
PSO017G2236 Papaver somniferum HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
PSO063G1081 Papaver somniferum HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
Prupe.6G358000 Prunus persica HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
Rhsim05G0168700 Rhododendron simsii HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 37.2
SalBow1G1247 Salvia bowleyana HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 38.5
Sc09g0001650 Simmondsia chinensis HOM05D001176 ORTHO05D003317 6.5e-06 55.1 78 39.7
arahy.Tifrunner.gnm1.ann1.570P5C Arachis hypogaea HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 38.5
CSS0037928 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 38.5
Cc09_g03290 Coffea canephora HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
FvH4_6g00890 Fragaria vesca HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
FAN05G5118 Fragaria x ananassa HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
FAN09G3806 Fragaria x ananassa HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
FAN14G4358 Fragaria x ananassa HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
Lsat_1_v5_gn_2_16321 Lactuca sativa HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
Potri.013G088100 Populus trichocarpa HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 38.5
Thecc.05G203300 Theobroma cacao HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7
VMungo1383G3642 Vigna mungo HOM05D001176 ORTHO05D003317 8.5e-06 54.7 78 39.7


User provided reference genes

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