Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 2.1e-106 389.0 199 100.0
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 3.0e-92 342.0 199 88.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 2.4e-89 332.4 197 86.8
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 2.4e-89 332.4 197 87.3
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.2e-88 330.1 200 87.5
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.6e-82 309.7 199 82.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 5.9e-64 248.1 202 67.3
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 1.7e-63 246.5 207 67.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.9e-62 243.0 174 74.7
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.5e-62 242.7 199 65.3
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 6.1e-61 238.0 201 66.2
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 7.9e-61 237.7 207 62.8
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 7.9e-61 237.7 209 63.6
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.4e-60 236.9 202 66.8
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.4e-60 236.9 200 66.5
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.3e-60 236.1 205 62.4
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 3.0e-60 235.7 202 65.8
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.1e-60 235.0 192 68.8
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 6.7e-60 234.6 196 65.3
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.3e-58 230.3 203 61.1
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.3e-58 230.3 203 63.5
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.7e-58 229.9 205 64.9
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.4e-57 226.1 207 61.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.4e-57 226.1 188 64.9
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 2.4e-57 226.1 208 63.0
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 3.1e-57 225.7 197 62.4
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 4.1e-57 225.3 207 61.8
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 5.3e-57 224.9 186 65.6
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.3e-57 224.9 204 63.2
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 5.3e-57 224.9 204 63.2
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 5.3e-57 224.9 211 61.1
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 6.9e-57 224.6 196 65.8
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 9.1e-57 224.2 192 63.0
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 9.1e-57 224.2 197 62.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.2e-56 223.8 202 59.9
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.2e-56 223.8 206 60.2
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.5e-56 223.4 204 62.7
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.5e-56 223.4 202 58.4
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.5e-56 223.4 199 63.8
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.0e-56 223.0 200 64.5
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.0e-56 223.0 203 60.6
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 5.9e-56 221.5 204 61.3
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 5.9e-56 221.5 203 62.1
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 7.7e-56 221.1 199 64.3
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.3e-55 220.3 201 60.2
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.3e-55 220.3 202 63.9
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.9e-55 219.2 202 63.4
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 8.5e-55 217.6 202 60.9
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 8.5e-55 217.6 188 63.8
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.4e-54 216.9 192 63.5
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.4e-54 216.9 208 60.1
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.4e-54 216.9 198 62.1
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-54 216.1 201 61.7
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.2e-54 215.7 192 60.9
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 5.5e-54 214.9 202 59.9
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 7.2e-54 214.5 193 61.7
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 7.2e-54 214.5 193 60.6
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 9.4e-54 214.2 154 74.0
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.1e-53 213.0 203 63.1
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 3.6e-53 212.2 161 70.2
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 3.6e-53 212.2 161 70.2
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 3.6e-53 212.2 193 62.7
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 6.1e-53 211.5 203 59.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 3.9e-52 208.8 186 61.3
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 8.8e-52 207.6 205 57.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.1e-51 207.2 202 56.9
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.1e-51 207.2 202 56.9
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.1e-51 207.2 202 56.9
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-51 207.2 185 60.5
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.5e-51 206.8 202 56.9
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.5e-51 206.8 204 57.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 2.0e-51 206.5 193 59.1
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 5.7e-51 204.9 202 55.9
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 5.7e-51 204.9 195 56.9
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 9.7e-51 204.1 189 56.1
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 9.7e-51 204.1 145 75.2
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 9.7e-51 204.1 191 60.7
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.7e-50 203.4 155 70.3
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.7e-50 203.4 204 56.4
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.8e-50 202.6 211 56.4
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 3.7e-50 202.2 163 65.0
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 4.8e-50 201.8 205 56.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 6.3e-50 201.4 192 55.2
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.4e-49 200.3 166 64.5
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 3.1e-49 199.1 163 64.4
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 5.3e-49 198.4 158 66.5
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 5.3e-49 198.4 182 61.0
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.2e-48 197.2 201 54.2
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.5e-48 195.7 153 64.7
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 4.5e-48 195.3 192 59.4
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 7.7e-48 194.5 195 58.5
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 4.2e-46 188.7 202 55.0
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.7e-45 186.0 207 49.3
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.0e-44 184.1 187 57.2
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.0e-44 184.1 149 65.1
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.0e-44 182.6 200 54.0
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.2e-44 181.8 200 54.5
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 6.7e-44 181.4 202 50.0
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 3.3e-43 179.1 203 46.8
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 2.1e-37 159.8 155 51.6
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.5e-35 153.7 202 44.1
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.4e-33 146.4 156 47.4
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 5.2e-28 128.6 157 48.4
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.8e-27 124.4 92 64.1
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 7.8e-24 114.8 122 48.4
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 8.3e-18 94.7 160 35.6
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.8e-17 93.6 116 49.1
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 6.6e-15 85.1 179 29.1
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 6.6e-15 85.1 141 31.2
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 1.5e-14 84.0 113 51.3
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.9e-14 83.6 188 29.8
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.6e-13 80.5 141 34.0
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 6.2e-13 78.6 141 31.9
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 2.3e-12 76.6 75 54.7
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.3e-12 76.6 140 32.9
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 2.3e-12 76.6 101 45.5


User provided reference genes

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