Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G274.4 Capsicum annuum HOM05D004175 ORTHO05D004664 5.8e-138 494.6 319 100.0
CAN.G525.1 Capsicum annuum HOM05D004175 ORTHO05D004664 1.6e-116 423.3 319 90.6
Sopen05g014800 Solanum pennellii HOM05D004175 ORTHO05D004664 9.3e-112 407.5 314 88.5
Solyc05g018150.3 Solanum lycopersicum HOM05D004175 ORTHO05D004664 3.0e-110 402.5 314 87.9
Peaxi162Scf00001g00131 Petunia axillaris HOM05D004175 ORTHO05D004664 1.1e-109 400.6 316 85.8
VMungo0251G2778 Vigna mungo HOM05D004175 ORTHO05D004664 2.3e-102 376.3 317 74.1
Medtr8g102770 Medicago truncatula HOM05D004175 ORTHO05D004664 6.7e-102 374.8 319 73.0
Glyma.08G034700 Glycine max HOM05D004175 ORTHO05D004664 1.1e-101 374.0 317 79.2
PSO210G6864 Papaver somniferum HOM05D004175 ORTHO05D004664 8.4e-97 357.8 317 76.0
Glyma.05G227700 Glycine max HOM05D004175 ORTHO05D004664 5.5e-96 355.1 317 76.3
CSS0007429 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 9.3e-96 354.4 317 76.0
CSS0045871 Camellia sinensis var. sinensis HOM05D004175 ORTHO05D004664 9.3e-96 354.4 317 76.0
CANSAT56G2035 Cannabis sativa HOM05D004175 ORTHO05D004664 1.6e-95 353.6 316 75.3
Ciclev10008855m.g Citrus clementina HOM05D004175 ORTHO05D004664 6.0e-95 351.7 314 74.8
Phvul.002G310000 Phaseolus vulgaris HOM05D004175 ORTHO05D004664 3.9e-94 349.0 317 71.6
Hund09241 Selenicereus undatus HOM05D004175 ORTHO05D004664 3.9e-94 349.0 319 69.9
TAR383G0226 Trochodendron aralioides HOM05D004175 ORTHO05D004664 7.4e-93 344.7 317 75.4
Lalb_Chr05g0223141 Lupinus albus HOM05D004175 ORTHO05D004664 2.1e-92 343.2 317 70.7
Cc06_g10300 Coffea canephora HOM05D004175 ORTHO05D004664 2.8e-92 342.8 314 71.0
Dinv36699 Davidia involucrata HOM05D004175 ORTHO05D004664 2.6e-90 336.3 319 71.8
Cfa003199 Carpinus fangiana HOM05D004175 ORTHO05D004664 4.5e-90 335.5 319 73.4
MD15G1194400 Malus domestica HOM05D004175 ORTHO05D004664 7.6e-90 334.7 317 74.8
Haze_25808 Corylus avellana HOM05D004175 ORTHO05D004664 1.7e-89 333.6 319 69.3
PSO210G7624 Papaver somniferum HOM05D004175 ORTHO05D004664 1.7e-89 333.6 317 73.5
Sc08g0007900 Simmondsia chinensis HOM05D004175 ORTHO05D004664 1.7e-89 333.6 317 75.4
SGA_v2.0_scaffold62G21556 Striga asiatica HOM05D004175 ORTHO05D004664 2.2e-89 333.2 316 73.7
Gohir.D06G065000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.1e-88 330.9 315 74.6
Oeu017825.1 Olea europaea HOM05D004175 ORTHO05D004664 1.9e-88 330.1 315 74.9
Gohir.A06G066500 Gossypium hirsutum HOM05D004175 ORTHO05D004664 3.5e-87 325.9 315 74.0
Lj3g0019618 Lotus japonicus HOM05D004175 ORTHO05D004664 3.5e-87 325.9 314 68.2
Eucgr.C03782 Eucalyptus grandis HOM05D004175 ORTHO05D004664 1.0e-86 324.3 317 72.6
Psat7g016360 Pisum sativum HOM05D004175 ORTHO05D004664 1.3e-86 323.9 316 70.3
Prupe.7G222100 Prunus persica HOM05D004175 ORTHO05D004664 1.3e-86 323.9 319 67.1
Duzib187G1630 Durio zibethinus HOM05D004175 ORTHO05D004664 2.3e-86 323.2 315 73.3
Gohir.A13G195800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 5.1e-86 322.0 315 72.7
MD02G1060900 Malus domestica HOM05D004175 ORTHO05D004664 6.7e-86 321.6 317 67.2
FAN26G0873 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.7e-86 321.2 316 73.4
FAN26G2762 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.7e-86 321.2 316 73.4
FAN28G2614 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.1e-85 320.9 316 73.1
Ca_17354_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.9e-85 320.1 313 66.5
Ca_29618_v3 Cicer arietinum L. HOM05D004175 ORTHO05D004664 1.9e-85 320.1 313 66.5
FvH4_1g05880 Fragaria vesca HOM05D004175 ORTHO05D004664 1.9e-85 320.1 316 72.8
FAN23G2598 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.9e-85 320.1 316 73.1
Oeu000358.1 Olea europaea HOM05D004175 ORTHO05D004664 1.9e-85 320.1 317 68.8
ClCG11G002240 Citrullus lanatus HOM05D004175 ORTHO05D004664 2.2e-84 316.6 345 56.2
Gohir.D13G201000 Gossypium hirsutum HOM05D004175 ORTHO05D004664 2.8e-84 316.2 315 72.1
Thecc.09G102700 Theobroma cacao HOM05D004175 ORTHO05D004664 2.8e-84 316.2 315 73.0
MSTRG.6019 Avicennia marina HOM05D004175 ORTHO05D004664 8.2e-84 314.7 316 71.2
GSVIVG01015319001 Vitis vinifera HOM05D004175 ORTHO05D004664 2.4e-83 313.2 317 71.9
QL02p042164 Quercus lobata HOM05D004175 ORTHO05D004664 3.1e-83 312.8 311 68.5
CiPaw.03G226400 Carya illinoinensis HOM05D004175 ORTHO05D004664 1.2e-82 310.8 319 69.3
DCAR_012049 Daucus carota HOM05D004175 ORTHO05D004664 1.5e-82 310.5 317 65.0
Lsat_1_v5_gn_5_143861 Lactuca sativa HOM05D004175 ORTHO05D004664 2.6e-82 309.7 312 66.7
arahy.Tifrunner.gnm1.ann1.2Q2DTK Arachis hypogaea HOM05D004175 ORTHO05D004664 4.5e-82 308.9 325 66.2
AUR62010918 Chenopodium quinoa HOM05D004175 ORTHO05D004664 4.5e-82 308.9 303 68.6
Manes.16G110500 Manihot esculenta HOM05D004175 ORTHO05D004664 4.5e-82 308.9 316 71.8
Atru.chr7.1440 Acer truncatum HOM05D004175 ORTHO05D004664 5.9e-82 308.5 313 67.4
Thhalv10014089m.g Eutrema salsugineum HOM05D004175 ORTHO05D004664 2.2e-81 306.6 314 65.0
Aqoxy7G03896 Aquilegia oxysepala HOM05D004175 ORTHO05D004664 3.8e-81 305.8 319 63.9
Gorai.010G076100 Gossypium raimondii HOM05D004175 ORTHO05D004664 3.8e-81 305.8 315 71.1
HanXRQChr10g0318361 Helianthus annuus HOM05D004175 ORTHO05D004664 3.8e-81 305.8 318 67.0
vmacro10860 Vaccinium macrocarpon HOM05D004175 ORTHO05D004664 1.4e-80 303.9 311 71.7
Sp6g24700 Schrenkiella parvula HOM05D004175 ORTHO05D004664 1.9e-80 303.5 314 71.0
Actinidia09442 Actinidia chinensis HOM05D001936 ORTHO05D002296 4.2e-80 302.4 313 70.6
Sed0003540 Sechium edule HOM05D004175 ORTHO05D004664 4.2e-80 302.4 318 68.2
Aa31LG1G8760 Aethionema arabicum HOM05D004175 ORTHO05D004664 7.2e-80 301.6 311 69.1
BNapus_Darmor_BZH_scaffold_38p02220 Brassica napus HOM05D004175 ORTHO05D004664 7.2e-80 301.6 319 63.9
BolC9t58515H Brassica oleracea HOM05D004175 ORTHO05D004664 1.2e-79 300.8 319 63.9
Nn2g11614 Nelumbo nucifera HOM05D004175 ORTHO05D004664 2.1e-79 300.1 317 69.4
TWI32G1108 Tripterygium wilfordii HOM05D004175 ORTHO05D004664 2.1e-79 300.1 316 65.8
BraA10t44078Z Brassica rapa HOM05D004175 ORTHO05D004664 2.7e-79 299.7 319 63.9
Ah.14g083210 Amaranthus hybridus HOM05D004175 ORTHO05D004664 3.6e-79 299.3 316 69.6
AT5G19680 Arabidopsis thaliana HOM05D004175 ORTHO05D004664 4.6e-79 298.9 314 64.6
Migut.J01107 Erythranthe guttata HOM05D004175 ORTHO05D004664 4.6e-79 298.9 316 69.3
BcaC03g13699 Brassica carinata HOM05D004175 ORTHO05D004664 6.1e-79 298.5 319 68.7
A10p20040 Brassica napus HOM05D004175 ORTHO05D004664 6.1e-79 298.5 319 63.9
CsaV3_2G001990 Cucumis sativus L. HOM05D004175 ORTHO05D004664 7.9e-79 298.1 315 67.0
FAN19G1571 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.0e-78 297.7 335 62.1
SGA_v2.0_scaffold10G05161 Striga asiatica HOM05D004175 ORTHO05D004664 1.0e-78 297.7 315 66.3
BraA02t05525Z Brassica rapa HOM05D004175 ORTHO05D004664 1.4e-78 297.4 319 68.7
Carub.0006s1803 Capsella rubella HOM05D004175 ORTHO05D004664 1.4e-78 297.4 314 64.6
MELO3C004581.2 Cucumis melo HOM05D004175 ORTHO05D004664 3.9e-78 295.8 315 67.0
arahy.Tifrunner.gnm1.ann1.5M1SBB Arachis hypogaea HOM05D004175 ORTHO05D004664 5.1e-78 295.4 325 64.3
A02p05730 Brassica napus HOM05D004175 ORTHO05D004664 5.1e-78 295.4 319 68.0
Zm00001eb204970 Zea mays HOM05D004175 ORTHO05D004664 2.0e-77 293.5 310 70.0
THA.LOC104811087 Tarenaya hassleriana HOM05D004175 ORTHO05D004664 5.7e-77 292.0 314 68.2
BcaC04g19365 Brassica carinata HOM05D004175 ORTHO05D004664 7.4e-77 291.6 319 63.0
C09p56500 Brassica napus HOM05D004175 ORTHO05D004664 7.4e-77 291.6 319 63.0
Potri.006G163900 Populus trichocarpa HOM05D004175 ORTHO05D004664 9.7e-77 291.2 316 69.6
BcaB05g23410 Brassica carinata HOM05D004175 ORTHO05D004664 1.7e-76 290.4 319 62.7
AL6G31190 Arabidopsis lyrata HOM05D004175 ORTHO05D004664 3.7e-76 289.3 314 63.4
Duzib168G0201 Durio zibethinus HOM05D004175 ORTHO05D004664 1.4e-75 287.3 234 76.1
SHI11434 Sapria himalayana HOM05D004175 ORTHO05D004664 9.1e-75 284.6 344 57.8
ECA234G4006 Erigeron canadensis HOM05D004175 ORTHO05D004664 2.6e-74 283.1 312 67.3
CARHR193230 Cardamine hirsuta HOM05D004175 ORTHO05D004664 2.9e-73 279.6 314 61.1
ATR0705G211 Amborella trichopoda HOM05D004175 ORTHO05D004664 1.1e-72 277.7 314 65.0
Nn8g39121 Nelumbo nucifera HOM05D004175 ORTHO05D004664 4.2e-72 275.8 290 71.7
Rhsim05G0041300 Rhododendron simsii HOM05D004175 ORTHO05D004664 4.2e-72 275.8 297 66.3
Cpa.g.sc40.51 Carica papaya HOM05D004175 ORTHO05D004664 7.2e-72 275.0 287 71.8
Gorai.013G229800 Gossypium raimondii HOM05D004175 ORTHO05D004664 9.4e-72 274.6 288 71.9
CDE02G1631 Ceratophyllum demersum HOM05D004175 ORTHO05D004664 4.7e-71 272.3 317 65.3
RcHm_v2.0_Chr2g0091621 Rosa chinensis HOM05D004175 ORTHO05D004664 1.0e-70 271.2 291 71.8
Os02g0230100 Oryza sativa ssp. japonica HOM05D004175 ORTHO05D004664 1.8e-70 270.4 310 66.5
Sabra18G0074500 Salix brachista HOM05D004175 ORTHO05D004664 2.0e-69 266.9 290 71.4
Potri.018G086200 Populus trichocarpa HOM05D004175 ORTHO05D004664 7.4e-69 265.0 291 70.4
TPR.G23501 Trifolium pratense HOM05D004175 ORTHO05D004664 2.2e-68 263.5 316 59.5
BolC2t08664H Brassica oleracea HOM05D004175 ORTHO05D004664 3.7e-68 262.7 216 72.2
MBI04_g40471_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 8.2e-68 261.5 293 69.3
BcaC04g19363 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-67 261.2 293 62.8
ECA247G2452 Erigeron canadensis HOM05D004175 ORTHO05D004664 2.0e-66 256.9 290 63.4
BcaC01g02078 Brassica carinata HOM05D004175 ORTHO05D004664 6.5e-65 251.9 217 63.1
BcaC04g19364 Brassica carinata HOM05D004175 ORTHO05D004664 1.1e-64 251.1 238 60.5
Hund26252 Selenicereus undatus HOM05D004175 ORTHO05D004664 2.7e-63 246.5 312 59.3
Lalb_Chr09g0331471 Lupinus albus HOM05D004175 ORTHO05D004664 1.8e-62 243.8 297 60.9
RcHm_v2.0_Chr2g0091541 Rosa chinensis HOM05D004175 ORTHO05D004664 5.2e-62 242.3 300 59.7
unitig_26.g8970 Utricularia gibba HOM05D004175 ORTHO05D004664 6.3e-60 235.3 318 56.3
COL.COLO4_34774 Corchorus olitorius HOM05D004175 ORTHO05D004664 5.0e-57 225.7 154 79.2
Pp3c1_38690 Physcomitrium patens HOM05D004175 ORTHO05D004664 9.4e-56 221.5 308 53.6
C02p31840 Brassica napus HOM05D004175 ORTHO05D004664 5.2e-54 215.7 218 62.8
Nitab4.5_0000012g0030 Nicotiana tabacum HOM05D004175 ORTHO05D004664 1.7e-52 210.7 156 74.4
SEGI_33191 Sequoiadendron giganteum HOM05D004175 ORTHO05D004664 4.8e-52 209.1 310 53.5
C07p36980 Brassica napus HOM05D004175 ORTHO05D004664 3.1e-51 206.5 223 60.5
Gorai.001G184800 Gossypium raimondii HOM05D004175 ORTHO05D004664 3.1e-51 206.5 158 75.3
Nitab4.5_0003199g0020 Nicotiana tabacum HOM05D004175 ORTHO05D004664 7.0e-51 205.3 317 45.4
C09p49510 Brassica napus HOM05D004175 ORTHO05D004664 2.0e-50 203.8 175 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1201 Anthoceros agrestis HOM05D004175 ORTHO05D004664 4.5e-50 202.6 308 52.3
Pp3c2_9120 Physcomitrium patens HOM05D004175 ORTHO05D004664 1.3e-49 201.1 308 49.4
EL10Ac8g18403 Beta vulgaris HOM05D004175 ORTHO05D004664 1.7e-49 200.7 288 56.6
C04p04320 Brassica napus HOM05D004175 ORTHO05D004664 2.5e-48 196.8 185 59.5
C05p31230 Brassica napus HOM05D004175 ORTHO05D004664 5.5e-48 195.7 177 59.3
C03p72980 Brassica napus HOM05D004175 ORTHO05D004664 7.2e-48 195.3 177 59.3
BcaC01g02978 Brassica carinata HOM05D004175 ORTHO05D004664 3.6e-47 193.0 218 52.8
A07p01400 Brassica napus HOM05D004175 ORTHO05D004664 8.0e-47 191.8 179 67.6
SMO337G0008 Selaginella moellendorffii HOM05D004175 ORTHO05D004664 8.0e-47 191.8 308 55.5
Lj7A662T62 Lonicera japonica HOM05D004175 ORTHO05D004664 2.3e-46 190.3 212 75.0
BcaC03g15042 Brassica carinata HOM05D004175 ORTHO05D004664 2.0e-45 187.2 185 57.8
BcaC06g33783 Brassica carinata HOM05D004175 ORTHO05D004664 4.4e-45 186.0 186 64.0
C03p57560 Brassica napus HOM05D004175 ORTHO05D004664 7.5e-45 185.3 177 65.0
Mapoly0051s0012 Marchantia polymorpha HOM05D004175 ORTHO05D004664 8.3e-44 181.8 310 48.7
BolC3t19136H Brassica oleracea HOM05D004175 ORTHO05D004664 1.2e-42 177.9 152 63.2
BraA03t14262Z Brassica rapa HOM05D004175 ORTHO05D004664 2.0e-42 177.2 153 73.9
BolC3t18031H Brassica oleracea HOM05D004175 ORTHO05D004664 2.3e-41 173.7 140 67.1
CBR_g36965 Chara braunii HOM05D004175 ORTHO05D004664 2.3e-41 173.7 308 49.4
Gorai.009G408400 Gossypium raimondii HOM05D004175 ORTHO05D004664 2.3e-41 173.7 207 73.9
C01p01530 Brassica napus HOM05D004175 ORTHO05D004664 7.3e-40 168.7 161 58.4
MBI04_g06580_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 1.3e-36 157.9 126 68.3
Gohir.D04G104800 Gossypium hirsutum HOM05D004175 ORTHO05D004664 1.7e-36 157.5 183 76.0
Glyma.08G276800 Glycine max HOM05D004175 ORTHO05D004664 5.4e-35 152.5 153 60.1
BolC7t44210H Brassica oleracea HOM05D004175 ORTHO05D004664 7.8e-34 148.7 132 62.9
MD03G1179500 Malus domestica HOM05D004175 ORTHO05D004664 4.4e-29 132.9 158 55.1
Cre05.g234655 Chlamydomonas reinhardtii HOM05D004175 ORTHO05D004664 1.5e-21 107.8 146 47.3
PRCOL_00004941 Prasinoderma coloniale HOM05D004175 ORTHO05D004664 8.3e-20 102.1 328 34.5
FAN10G3778 Fragaria x ananassa HOM05D004175 ORTHO05D004664 1.9e-19 100.9 84 66.7
FAN10G1780 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.1e-19 99.0 84 65.5
FAN10G3383 Fragaria x ananassa HOM05D004175 ORTHO05D004664 7.1e-19 99.0 84 65.5
COL.COLO4_34775 Corchorus olitorius HOM05D004175 ORTHO05D004664 2.7e-18 97.1 96 55.2
FAN10G2625 Fragaria x ananassa HOM05D004175 ORTHO05D004664 2.5e-16 90.5 77 64.9
BolC9t58072H Brassica oleracea HOM05D004175 ORTHO05D004664 6.8e-14 82.4 96 45.8
FAN28G1141 Fragaria x ananassa HOM05D004175 ORTHO05D004664 8.9e-14 82.0 77 58.4
FvH4_5g23601 Fragaria vesca HOM05D004175 ORTHO05D045656 1.5e-13 81.3 67 67.2
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 5.8e-13 79.3 80 61.2
MBI04_g44954_MAGBIO Magnolia biondii HOM05D004175 ORTHO05D004664 5.8e-13 79.3 163 45.4
BolC4t22068H Brassica oleracea HOM05D004175 ORTHO05D004664 2.2e-12 77.4 101 46.5
C09p52070 Brassica napus HOM05D004175 ORTHO05D004664 6.4e-12 75.9 102 43.1
FvH4_3g18060 Fragaria vesca HOM05D004175 ORTHO05D004664 8.6e-09 65.5 49 67.3
FAN20G2587 Fragaria x ananassa HOM05D000366 ORTHO05D000437 3.6e-07 60.1 96 41.7
C05p31220 Brassica napus HOM05D000252 ORTHO05D004664 2.4e-06 57.4 31 83.9


User provided reference genes

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