Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G274.2 Capsicum annuum HOM05D000542 ORTHO05D000202 3.2e-22 107.5 51 100.0
CAN.G787.25 Capsicum annuum HOM05D000542 ORTHO05D000202 8.1e-10 66.2 45 73.3
CAN.G787.21 Capsicum annuum HOM05D000542 ORTHO05D000202 1.8e-09 65.1 48 66.7
Nitab4.5_0009466g0030 Nicotiana tabacum HOM05D000542 ORTHO05D000202 4.0e-09 63.9 47 68.1
Nitab4.5_0001794g0130 Nicotiana tabacum HOM05D000542 ORTHO05D000202 9.0e-09 62.8 47 68.1
Peaxi162Scf00110g00146 Petunia axillaris HOM05D000542 ORTHO05D000202 9.0e-09 62.8 47 68.1
Sopen01g051690 Solanum pennellii HOM05D000542 ORTHO05D000202 9.0e-09 62.8 47 68.1
PGSC0003DMG400025192 Solanum tuberosum HOM05D000542 ORTHO05D000202 9.0e-09 62.8 47 68.1
CAN.G787.15 Capsicum annuum HOM05D000542 ORTHO05D000202 1.2e-08 62.4 48 64.6
Solyc01g109500.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 1.5e-08 62.0 44 70.5
CAN.G322.125 Capsicum annuum HOM05D000542 ORTHO05D000202 2.0e-08 61.6 47 66.0
Peaxi162Scf00016g00087 Petunia axillaris HOM05D000542 ORTHO05D000202 2.0e-08 61.6 47 66.0
CAN.G787.23 Capsicum annuum HOM05D000542 ORTHO05D000202 4.4e-08 60.5 42 66.7
CSS0038670 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 1.7e-07 58.5 44 63.6
PGSC0003DMG400025193 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.7e-07 58.5 47 61.7
PGSC0003DMG400025194 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.7e-07 58.5 47 61.7
CSS0046303 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 2.2e-07 58.2 44 63.6
Rhsim11G0175000 Rhododendron simsii HOM05D000542 ORTHO05D000202 2.2e-07 58.2 47 59.6
CAN.G322.123 Capsicum annuum HOM05D000542 ORTHO05D000202 2.9e-07 57.8 47 63.8
SalBow6G5032 Salvia bowleyana HOM05D000542 ORTHO05D000202 2.9e-07 57.8 44 61.4
SalBow6G6229 Salvia bowleyana HOM05D000542 ORTHO05D000202 2.9e-07 57.8 44 61.4
Sc18g0004590 Simmondsia chinensis HOM05D000542 ORTHO05D000202 2.9e-07 57.8 43 65.1
vmacro17187 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 2.9e-07 57.8 47 57.4
CAN.G194.14 Capsicum annuum HOM05D000542 ORTHO05D000202 3.8e-07 57.4 48 58.3
CiPaw.05G063300 Carya illinoinensis HOM05D000542 ORTHO05D000202 3.8e-07 57.4 44 65.9
Rhsim11G0175300 Rhododendron simsii HOM05D000542 ORTHO05D000202 3.8e-07 57.4 47 59.6
Rhsim11G0175500 Rhododendron simsii HOM05D000542 ORTHO05D000202 3.8e-07 57.4 47 59.6
TAR628G0639 Trochodendron aralioides HOM05D000542 ORTHO05D000202 3.8e-07 57.4 44 59.1
TAR628G1303 Trochodendron aralioides HOM05D000542 ORTHO05D000202 3.8e-07 57.4 44 59.1
CSS0030457 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 4.9e-07 57.0 44 61.4
MSTRG.20091 Avicennia marina HOM05D000542 ORTHO05D000202 6.4e-07 56.6 44 63.6
CSS0001855 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 6.4e-07 56.6 44 61.4
Rhsim11G0175700 Rhododendron simsii HOM05D000542 ORTHO05D000202 6.4e-07 56.6 47 57.4
Aqoxy6G01077 Aquilegia oxysepala HOM05D000542 ORTHO05D000202 8.4e-07 56.2 44 56.8
CAN.G787.22 Capsicum annuum HOM05D000542 ORTHO05D000202 8.4e-07 56.2 44 63.6
Medtr4g069570 Medicago truncatula HOM05D000542 ORTHO05D000202 8.4e-07 56.2 43 53.5
Potri.009G114600 Populus trichocarpa HOM05D000542 ORTHO05D000202 8.4e-07 56.2 47 61.7
Ah.01g019540 Amaranthus hybridus HOM05D000542 ORTHO05D000202 1.1e-06 55.8 44 61.4
DCAR_022111 Daucus carota HOM05D000542 ORTHO05D000202 1.1e-06 55.8 47 61.7
Haze_02371 Corylus avellana HOM05D000542 ORTHO05D000202 1.4e-06 55.5 44 61.4
Hma1.2p1_0066F.1_g036520 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.4e-06 55.5 44 61.4
Hma1.2p1_0066F.1_g036550 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.4e-06 55.5 44 61.4
Hma1.2p1_0066F.1_g036565 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.4e-06 55.5 44 61.4
Hma1.2p1_0066F.1_g036585 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.4e-06 55.5 44 61.4
Lj9P368T54 Lonicera japonica HOM05D000542 ORTHO05D000202 1.4e-06 55.5 47 57.4
Hund00275 Selenicereus undatus HOM05D000542 ORTHO05D000202 1.4e-06 55.5 45 62.2
Hund00285 Selenicereus undatus HOM05D000542 ORTHO05D000202 1.4e-06 55.5 45 62.2
CiPaw.06G136600 Carya illinoinensis HOM05D000542 ORTHO05D000202 1.9e-06 55.1 44 61.4
Cfa005017 Carpinus fangiana HOM05D000542 ORTHO05D000202 3.2e-06 54.3 44 59.1
Psat7g142040 Pisum sativum HOM05D000542 ORTHO05D000202 3.2e-06 54.3 46 45.7
QL11p043294 Quercus lobata HOM05D000542 ORTHO05D000202 3.2e-06 54.3 44 61.4
CAN.G787.24 Capsicum annuum HOM05D000542 ORTHO05D000202 4.2e-06 53.9 45 60.0
Dinv23537 Davidia involucrata HOM05D000542 ORTHO05D000202 4.2e-06 53.9 44 59.1
TPR.G20462 Trifolium pratense HOM05D000542 ORTHO05D000202 4.2e-06 53.9 46 47.8
CANSAT56G0239 Cannabis sativa HOM05D000542 ORTHO05D000202 7.1e-06 53.1 44 54.5
Lj9C368T21 Lonicera japonica HOM05D000542 ORTHO05D000202 7.1e-06 53.1 44 59.1
SGA_v2.0_scaffold58G20548 Striga asiatica HOM05D000542 ORTHO05D000202 7.1e-06 53.1 44 52.3
Medtr4g069040 Medicago truncatula HOM05D000542 ORTHO05D000202 9.3e-06 52.8 46 45.7
Prupe.8G098700 Prunus persica HOM05D000542 ORTHO05D000202 9.3e-06 52.8 47 57.4
TPR.G27336 Trifolium pratense HOM05D000542 ORTHO05D000202 9.3e-06 52.8 48 56.2


User provided reference genes

Program Settings