Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 1.5e-261 905.6 444 100.0
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 3.1e-246 854.7 444 93.0
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 2.7e-234 815.1 425 92.2
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 8.7e-225 783.5 442 86.4
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 1.7e-217 759.2 444 82.2
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 6.6e-217 757.3 444 80.4
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 1.3e-215 753.1 441 81.2
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 4.8e-215 751.1 424 86.6
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 1.8e-214 749.2 441 81.6
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 3.1e-214 748.4 441 80.7
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 1.5e-213 746.1 441 80.3
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 8.4e-212 740.3 440 80.0
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 4.2e-211 738.0 441 79.8
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 1.6e-210 736.1 441 79.8
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 1.5e-208 729.6 443 78.1
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 1.5e-208 729.6 438 78.1
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 1.5e-208 729.6 444 79.3
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 5.6e-208 727.6 441 78.9
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 2.1e-207 725.7 440 78.2
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 2.1e-207 725.7 437 78.7
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 3.7e-207 724.9 444 77.7
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 6.2e-207 724.2 441 78.7
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 6.2e-207 724.2 443 76.7
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 9.0e-206 720.3 439 77.7
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 1.2e-205 719.9 441 77.8
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 2.0e-205 719.2 441 76.2
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 2.6e-205 718.8 426 80.3
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 5.8e-205 717.6 437 76.7
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 7.6e-205 717.2 444 77.3
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 1.7e-204 716.1 438 76.5
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 8.4e-204 713.8 424 79.7
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 7.1e-203 710.7 422 80.1
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 9.3e-203 710.3 444 76.6
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 2.1e-202 709.1 440 75.9
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 2.1e-202 709.1 441 75.7
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 2.1e-202 709.1 440 76.6
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 2.1e-202 709.1 444 75.5
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 7.9e-202 707.2 432 76.2
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 1.0e-201 706.8 437 78.0
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 1.8e-201 706.1 440 75.9
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 3.0e-201 705.3 428 77.1
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 3.9e-201 704.9 437 75.1
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 5.1e-201 704.5 432 75.7
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 6.7e-201 704.1 438 75.3
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 6.7e-201 704.1 439 75.4
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 1.9e-200 702.6 441 74.8
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 2.5e-200 702.2 428 76.2
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 3.3e-200 701.8 441 77.3
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 9.6e-200 700.3 440 75.9
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 9.6e-200 700.3 441 75.1
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 2.1e-199 699.1 428 76.4
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 3.7e-199 698.4 450 74.7
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 3.7e-199 698.4 440 74.3
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 3.7e-199 698.4 444 75.2
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 6.2e-199 697.6 435 75.2
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 1.1e-198 696.8 457 73.3
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 3.1e-198 695.3 434 76.5
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 3.1e-198 695.3 444 74.5
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 4.0e-198 694.9 442 74.7
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 9.0e-198 693.7 441 74.4
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 2.0e-197 692.6 360 93.3
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 2.6e-197 692.2 439 74.9
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 3.4e-197 691.8 439 74.9
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 3.4e-197 691.8 422 75.1
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 5.8e-197 691.0 440 75.0
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 7.6e-197 690.6 441 74.1
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 7.6e-197 690.6 441 72.8
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 7.6e-197 690.6 440 73.6
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 8.4e-196 687.2 440 74.8
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 1.9e-195 686.0 447 73.2
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 1.9e-195 686.0 439 74.9
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 2.5e-195 685.6 440 75.0
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 4.2e-195 684.9 437 73.5
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 5.5e-195 684.5 437 72.5
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 4.6e-194 681.4 432 73.1
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 7.9e-194 680.6 439 71.3
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 8.7e-193 677.2 444 71.8
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 4.3e-192 674.9 419 75.2
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 1.3e-191 673.3 441 72.8
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 4.8e-191 671.4 396 79.3
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 4.1e-190 668.3 466 70.4
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 9.0e-190 667.2 441 72.3
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 9.0e-190 667.2 418 73.7
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 2.6e-189 665.6 418 73.4
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 5.9e-189 664.5 455 72.3
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 2.9e-188 662.1 450 72.0
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 3.6e-186 655.2 432 70.6
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 1.7e-183 646.4 473 67.9
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 2.0e-181 639.4 432 69.0
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 5.0e-180 634.8 500 64.6
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 1.2e-178 630.2 434 68.7
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 3.0e-177 625.5 398 74.6
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 3.7e-175 618.6 438 65.5
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 7.0e-174 614.4 421 70.3
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 1.3e-172 610.1 447 66.4
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.4e-169 600.1 441 63.7
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 1.7e-167 593.2 434 69.6
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 1.7e-167 593.2 483 59.6
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 4.5e-165 585.1 392 71.2
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 2.1e-162 576.2 441 64.6
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 1.2e-160 570.5 365 74.2
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 4.8e-159 565.1 538 55.4
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 2.7e-154 549.3 375 69.3
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 8.8e-153 544.3 441 57.1
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 4.8e-151 538.5 437 61.1
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 7.7e-149 531.2 466 56.2
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 7.7e-149 531.2 438 58.0
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 7.5e-144 514.6 425 59.5
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 7.5e-144 514.6 436 56.2
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 4.9e-143 511.9 422 60.0
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 2.9e-135 486.1 430 53.7
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 1.1e-126 457.6 435 51.7
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 4.7e-122 442.2 269 75.1
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 9.9e-120 434.5 412 52.4
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 1.8e-113 413.7 244 76.2
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 8.7e-108 394.8 246 82.1
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 5.8e-104 382.1 244 76.2
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 8.1e-98 361.7 386 43.8
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 1.1e-94 351.3 277 62.5
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 1.4e-94 350.9 444 41.2
Ciclev10012767m.g Citrus clementina HOM05D004472 ORTHO05D007169 2.4e-94 350.1 194 79.9
Hma1.2p1_0386F.1_g141870 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 5.4e-94 349.0 196 80.6
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 1.5e-88 330.9 507 36.5
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 2.0e-59 234.2 168 69.0
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 2.8e-58 230.3 199 60.3
Haze_26548 Corylus avellana HOM05D005705 ORTHO05D007152 2.6e-48 197.2 419 31.3
Lsat_1_v5_gn_5_163500 Lactuca sativa HOM05D004472 ORTHO05D007169 5.9e-48 196.1 184 53.3
Peaxi162Scf00258g00729 Petunia axillaris HOM05D004472 ORTHO05D007169 5.9e-48 196.1 95 93.7
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.7e-47 194.5 169 54.4
BcaNung04407 Brassica carinata HOM05D004472 ORTHO05D007169 5.0e-47 193.0 246 43.1
BcaNung06765 Brassica carinata HOM05D004472 ORTHO05D027254 2.6e-43 180.6 145 58.6
BcaC04g21709 Brassica carinata HOM05D004472 ORTHO05D013781 6.3e-42 176.0 152 56.6
BcaC03g16493 Brassica carinata HOM05D004472 ORTHO05D013781 4.1e-41 173.3 195 47.7
A02p27200 Brassica napus HOM05D004472 ORTHO05D013781 5.4e-41 172.9 113 65.5
SEGI_39608 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 4.7e-37 159.8 132 56.1
BcaB02g11100 Brassica carinata HOM05D004472 ORTHO05D027254 3.1e-33 147.1 142 52.8
BolC9t55720H Brassica oleracea HOM05D004472 ORTHO05D013781 3.8e-31 140.2 96 64.6
A09p46770 Brassica napus HOM05D004472 ORTHO05D013781 3.3e-30 137.1 86 67.4
BcaC01g04270 Brassica carinata HOM05D004472 ORTHO05D013781 6.1e-29 132.9 125 52.8
BcaC02g12460 Brassica carinata HOM05D004472 ORTHO05D013781 2.9e-26 124.0 129 51.2
BcaNung00145 Brassica carinata HOM05D004472 ORTHO05D013781 1.6e-24 118.2 148 45.3
BcaC05g24672 Brassica carinata HOM05D004472 ORTHO05D027254 6.6e-23 112.8 126 47.6
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.1e-20 104.0 96 54.2
CARHR228030 Cardamine hirsuta HOM05D004472 ORTHO05D039758 1.9e-17 94.7 67 70.1
C03p43020 Brassica napus HOM05D004472 ORTHO05D013781 4.6e-16 90.1 66 60.6
BcaB02g11125 Brassica carinata HOM05D004472 ORTHO05D039758 1.9e-14 84.7 65 66.2
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 2.6e-11 74.3 66 60.6
SMO364G0765 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 1.3e-10 72.0 43 74.4
BcaB06g25539 Brassica carinata HOM05D004472 ORTHO05D094557 2.9e-10 70.9 82 46.3
BolC3t16570H Brassica oleracea HOM05D004472 ORTHO05D013781 1.6e-08 65.1 55 56.4
BraA07t27940Z Brassica rapa HOM05D004472 ORTHO05D013781 1.6e-08 65.1 55 56.4
BraA06t25637Z Brassica rapa HOM05D004472 ORTHO05D013781 3.5e-08 63.9 53 56.6
CARHR241940 Cardamine hirsuta HOM05D004472 ORTHO05D007169 6.0e-08 63.2 38 76.3
BraA08t32859Z Brassica rapa HOM05D004472 ORTHO05D027254 2.3e-07 61.2 47 59.6


User provided reference genes

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