Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G271.7 Capsicum annuum HOM05D002553 ORTHO05D002767 2.9e-81 305.1 144 100.0
PGSC0003DMG400018888 Solanum tuberosum HOM05D002553 ORTHO05D002767 1.6e-47 193.0 103 87.4
Solyc10g009400.3 Solanum lycopersicum HOM05D002553 ORTHO05D002767 8.0e-47 190.7 101 89.1
Sopen10g005180 Solanum pennellii HOM05D002553 ORTHO05D002767 2.6e-45 185.7 101 87.1
Nitab4.5_0000176g0030 Nicotiana tabacum HOM05D002553 ORTHO05D002767 3.6e-39 165.2 101 76.2
Nitab4.5_0001510g0020 Nicotiana tabacum HOM05D002553 ORTHO05D002767 6.2e-39 164.5 101 74.3
Peaxi162Scf01441g00005 Petunia axillaris HOM05D002553 ORTHO05D002767 1.4e-35 153.3 100 72.0
Oeu057684.1 Olea europaea HOM05D002553 ORTHO05D002767 5.8e-29 131.3 101 63.4
Migut.M00920 Erythranthe guttata HOM05D002553 ORTHO05D002767 1.9e-27 126.3 101 62.4
Actinidia19805 Actinidia chinensis HOM05D002553 ORTHO05D002767 2.1e-26 122.9 98 61.2
CSS0035336 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 2.3e-25 119.4 88 63.6
SGA_v2.0_scaffold1G00162 Striga asiatica HOM05D002553 ORTHO05D002767 6.6e-25 117.9 101 55.4
Hma1.2p1_0666F.1_g199460 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 1.1e-24 117.1 102 57.8
Rhsim05G0144400 Rhododendron simsii HOM05D002553 ORTHO05D002767 7.3e-24 114.4 98 57.1
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 2.1e-23 112.8 86 61.6
Sc09g0003350 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.8e-22 109.8 95 52.6
Lsat_1_v5_gn_2_67941 Lactuca sativa HOM05D002553 ORTHO05D002767 4.0e-22 108.6 86 58.1
HanXRQChr14g0445961 Helianthus annuus HOM05D002553 ORTHO05D002767 5.2e-22 108.2 86 58.1
Cc02_g32700 Coffea canephora HOM05D002553 ORTHO05D002767 9.0e-22 107.5 103 56.3
Atru.chr2.474 Acer truncatum HOM05D002553 ORTHO05D002767 1.2e-21 107.1 111 53.2
MD04G1209100 Malus domestica HOM05D002553 ORTHO05D002767 1.2e-21 107.1 88 56.8
AUR62000868 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.6e-21 105.9 86 60.5
MSTRG.16234 Avicennia marina HOM05D002553 ORTHO05D002767 4.4e-21 105.1 98 56.1
PGR031G3980 Punica granatum HOM05D002553 ORTHO05D002767 9.9e-21 104.0 111 52.3
QL03p004484 Quercus lobata HOM05D002553 ORTHO05D002767 1.3e-20 103.6 151 39.7
TWI56G0412 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 1.3e-20 103.6 86 57.0
CANSAT25G3036 Cannabis sativa HOM05D002553 ORTHO05D002767 1.7e-20 103.2 98 51.0
Haze_04234 Corylus avellana HOM05D002553 ORTHO05D002767 1.7e-20 103.2 98 49.0
Cpa.g.sc48.13 Carica papaya HOM05D002553 ORTHO05D002767 2.9e-20 102.4 89 53.9
DCAR_029434 Daucus carota HOM05D002553 ORTHO05D002767 3.8e-20 102.1 90 57.8
ECA238G2267 Erigeron canadensis HOM05D002553 ORTHO05D002767 4.9e-20 101.7 99 50.5
CiPaw.07G014700 Carya illinoinensis HOM05D002553 ORTHO05D002767 6.4e-20 101.3 97 46.4
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 8.4e-20 100.9 105 46.7
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 1.1e-19 100.5 87 57.5
RcHm_v2.0_Chr3g0454111 Rosa chinensis HOM05D002553 ORTHO05D002767 1.1e-19 100.5 86 54.7
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.9e-19 99.8 86 53.5
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 2.4e-19 99.4 98 49.0
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 3.2e-19 99.0 86 55.8
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 3.2e-19 99.0 86 58.1
FvH4_6g05341 Fragaria vesca HOM05D002553 ORTHO05D002767 9.3e-19 97.4 86 52.3
FAN05G4192 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.2e-18 97.1 86 52.3
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.6e-18 96.7 86 53.5
Dinv40259 Davidia involucrata HOM05D002553 ORTHO05D002767 2.7e-18 95.9 73 61.6
ATR0626G345 Amborella trichopoda HOM05D002553 ORTHO05D002767 1.3e-17 93.6 110 48.2
CDE08G1662 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 1.3e-17 93.6 102 50.0
Gorai.004G243500 Gossypium raimondii HOM05D002553 ORTHO05D002767 1.3e-17 93.6 98 49.0
Sabra05G0037600 Salix brachista HOM05D002553 ORTHO05D002767 1.7e-17 93.2 119 43.7
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 3.0e-17 92.4 90 53.3
FAN05G5165 Fragaria x ananassa HOM05D002553 ORTHO05D002767 5.1e-17 91.7 86 48.8
Potri.005G039000 Populus trichocarpa HOM05D002553 ORTHO05D002767 5.1e-17 91.7 96 47.9
unitig_32.g11004 Utricularia gibba HOM05D002553 ORTHO05D002767 5.1e-17 91.7 94 53.2
Gohir.D08G229300 Gossypium hirsutum HOM05D002553 ORTHO05D002767 6.6e-17 91.3 98 48.0
arahy.Tifrunner.gnm1.ann1.NG2XET Arachis hypogaea HOM05D002553 ORTHO05D002767 1.1e-16 90.5 99 49.5
arahy.Tifrunner.gnm1.ann1.Y4B2Z0 Arachis hypogaea HOM05D002553 ORTHO05D002767 1.1e-16 90.5 99 49.5
Lalb_Chr15g0077101 Lupinus albus HOM05D002553 ORTHO05D002767 1.5e-16 90.1 86 55.8
Thecc.05G308100 Theobroma cacao HOM05D002553 ORTHO05D002767 2.5e-16 89.4 101 46.5
PSO210G0829 Papaver somniferum HOM05D002553 ORTHO05D002767 3.3e-16 89.0 104 47.1
vmacro19643 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 3.3e-16 89.0 144 37.5
Aqoxy1G02454 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 5.6e-16 88.2 107 44.9
PSO832G1112 Papaver somniferum HOM05D002553 ORTHO05D002767 7.3e-16 87.8 104 47.1
SalBow8G2918 Salvia bowleyana HOM05D002553 ORTHO05D002767 7.3e-16 87.8 127 41.7
VMungo0540G2049 Vigna mungo HOM05D002553 ORTHO05D002767 7.3e-16 87.8 98 46.9
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 1.6e-15 86.7 88 48.9
Phvul.006G093922 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.6e-15 86.7 98 45.9
THA.LOC104818678 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 2.8e-15 85.9 86 52.3
BcaNung02464 Brassica carinata HOM05D002553 ORTHO05D002767 3.6e-15 85.5 85 51.8
Lj1g0019778 Lotus japonicus HOM05D002553 ORTHO05D002767 3.6e-15 85.5 100 45.0
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 8.1e-15 84.3 78 55.1
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 8.1e-15 84.3 78 55.1
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 1.1e-14 84.0 93 48.4
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 1.1e-14 84.0 93 48.4
Glyma.19G237200 Glycine max HOM05D002553 ORTHO05D002767 1.1e-14 84.0 98 44.9
Phvul.006G093933 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.4e-14 83.6 98 45.9
Psat3g010200 Pisum sativum HOM05D002553 ORTHO05D002767 2.4e-14 82.8 101 42.6
Carub.0006s2514 Capsella rubella HOM05D002553 ORTHO05D002767 4.0e-14 82.0 93 45.2
Nn1g02088 Nelumbo nucifera HOM05D002553 ORTHO05D002767 5.3e-14 81.6 80 50.0
BcaNung04367 Brassica carinata HOM05D002553 ORTHO05D002767 9.0e-14 80.9 99 42.4
Ca_09373_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 9.0e-14 80.9 88 50.0
Aa31LG11G9180 Aethionema arabicum HOM05D002553 ORTHO05D002767 1.2e-13 80.5 93 44.1
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 1.5e-13 80.1 91 45.1
AL6G39610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 3.4e-13 79.0 93 45.2
CARHR186000 Cardamine hirsuta HOM05D002553 ORTHO05D002767 4.9e-12 75.1 91 44.0
AT5G27400 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.1e-11 73.9 93 43.0
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.1e-11 73.9 93 43.0
Medtr7g113850 Medicago truncatula HOM05D002553 ORTHO05D002767 1.1e-11 73.9 91 46.2
Sp2g20630 Schrenkiella parvula HOM05D002553 ORTHO05D002767 2.4e-11 72.8 85 44.7
Zm00001eb417780 Zea mays HOM05D002553 ORTHO05D002767 5.4e-11 71.6 79 45.6
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 1.2e-10 70.5 78 44.9
Pp3c27_4830 Physcomitrium patens HOM05D002553 ORTHO05D002767 2.1e-10 69.7 96 42.7
Os05g0143200 Oryza sativa ssp. japonica HOM05D002553 ORTHO05D002767 2.7e-10 69.3 79 44.3
Lj7C475G4 Lonicera japonica HOM05D002553 ORTHO05D002767 1.3e-07 60.5 43 67.4
TPR.G33193 Trifolium pratense HOM05D002553 ORTHO05D002767 3.7e-07 58.9 86 38.4
Mapoly0153s0022 Marchantia polymorpha HOM05D002553 ORTHO05D002767 3.1e-06 55.8 101 31.7
CSS0010777 Camellia sinensis var. sinensis HOM05D002553 ORTHO05D002767 5.3e-06 55.1 43 60.5
AagrBONN_evm.TU.Sc2ySwM_368.1399 Anthoceros agrestis HOM05D002553 ORTHO05D002767 9.0e-06 54.3 80 33.8


User provided reference genes

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