Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-184 649.0 320 100.0
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 3.5e-167 591.7 313 93.0
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.6e-159 566.2 311 89.1
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 2.3e-150 535.8 311 85.2
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 8.9e-147 523.9 311 84.2
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.7e-134 483.0 312 75.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.5e-133 479.9 311 74.3
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.4e-131 472.6 316 72.2
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.7e-129 466.5 310 72.3
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.9e-128 463.0 315 70.5
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 4.2e-128 461.8 309 72.2
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 5.4e-128 461.5 304 72.4
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 3.0e-126 455.7 311 70.1
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 6.6e-126 454.5 319 69.3
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 8.7e-126 454.1 309 72.2
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.9e-125 453.0 311 70.4
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 2.5e-125 452.6 311 69.8
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 3.6e-124 448.7 318 68.9
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 3.6e-124 448.7 308 69.8
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 6.2e-124 448.0 314 68.8
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.8e-123 446.4 315 68.3
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.8e-123 446.4 318 67.3
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.8e-123 446.4 315 67.9
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 4.0e-123 445.3 314 68.5
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.2e-122 443.7 334 67.1
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 2.6e-122 442.6 320 68.1
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 4.5e-122 441.8 309 68.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.3e-121 440.3 312 68.3
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.7e-121 439.9 309 68.6
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.2e-121 439.5 309 68.6
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 7.1e-120 434.5 315 66.3
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 9.3e-120 434.1 312 69.9
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.6e-119 431.8 312 64.4
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 7.9e-119 431.0 315 67.6
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 7.9e-119 431.0 309 66.3
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 1.3e-118 430.3 364 61.3
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 3.9e-118 428.7 313 66.8
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 6.7e-118 427.9 312 64.7
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 8.7e-118 427.6 309 65.7
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 1.9e-117 426.4 315 66.7
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 3.3e-117 425.6 309 64.7
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 7.4e-117 424.5 319 65.2
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 8.1e-116 421.0 309 65.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.8e-115 419.9 310 65.5
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.8e-115 419.9 312 63.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 1.2e-114 417.2 309 66.3
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.5e-114 416.8 315 65.1
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.5e-114 416.8 313 66.1
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.0e-114 416.4 312 63.5
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 3.4e-114 415.6 318 65.4
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 4.5e-114 415.2 318 64.5
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 5.8e-114 414.8 316 65.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 9.9e-114 414.1 318 64.2
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.3e-113 413.7 318 63.8
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.2e-113 412.9 312 64.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 3.8e-113 412.1 313 63.3
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 1.4e-112 410.2 309 65.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 2.4e-112 409.5 310 63.9
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 3.2e-112 409.1 310 64.2
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 4.2e-112 408.7 313 63.6
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 9.3e-112 407.5 309 64.1
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.8e-110 403.3 310 63.9
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.1e-109 400.6 312 63.1
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.1e-109 400.6 312 63.1
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 1.1e-109 400.6 312 63.1
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 3.3e-109 399.1 313 64.5
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 5.6e-109 398.3 310 62.9
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 9.6e-109 397.5 309 62.1
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.6e-108 396.7 310 62.3
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.6e-108 396.7 309 61.8
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 8.1e-108 394.4 321 62.0
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 2.4e-107 392.9 311 63.7
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.4e-107 392.9 312 63.1
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 5.8e-106 388.3 314 62.4
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 7.6e-106 387.9 313 61.7
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.3e-105 387.1 285 66.0
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 3.8e-105 385.6 316 62.0
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 8.4e-105 384.4 311 60.5
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.9e-104 383.3 316 61.1
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.2e-104 382.5 310 62.6
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 4.2e-104 382.1 317 62.1
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 4.2e-104 382.1 314 60.8
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.2e-103 380.6 311 57.6
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 3.0e-102 375.9 307 60.6
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 5.1e-102 375.2 316 59.5
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.1e-101 374.0 358 55.0
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.8e-99 366.7 311 55.6
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 3.1e-99 365.9 309 58.9
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 4.1e-99 365.5 309 58.9
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 3.4e-98 362.5 303 56.4
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.3e-97 360.5 297 57.2
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.9e-96 356.7 309 57.6
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-94 350.1 215 82.8
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.9e-93 346.7 339 51.9
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.2e-90 337.4 341 53.7
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.9e-89 332.8 252 65.5
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.0e-89 332.0 227 66.5
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 5.5e-88 328.6 311 55.3
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 3.0e-86 322.8 274 57.7
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 4.8e-84 315.5 336 47.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.4e-83 313.9 314 51.9
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.7e-81 307.0 253 59.3
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.7e-79 299.7 260 58.8
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.9e-73 279.6 311 43.7
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 2.2e-68 263.5 284 48.6
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 2.8e-68 263.1 210 61.9
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 7.7e-66 255.0 337 42.4
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.9e-65 253.1 253 49.8
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 5.7e-61 238.8 315 39.7
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.8e-60 236.5 157 70.7
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 7.2e-56 221.9 273 44.3
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.1e-55 220.3 284 39.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 2.2e-52 210.3 161 67.7
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.6e-47 194.1 158 62.0
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 5.2e-46 189.1 318 34.0
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 1.3e-41 174.5 252 40.9
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 3.6e-39 166.4 174 50.6
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.2e-37 161.4 146 54.1
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 6.6e-33 145.6 87 78.2
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.8e-31 140.2 78 80.8
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 4.0e-30 136.3 80 80.0
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 3.2e-27 126.7 69 78.3
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.1e-27 126.3 143 52.4
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 6.0e-26 122.5 217 38.7
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 6.6e-25 119.0 121 53.7
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.3e-24 116.3 88 59.1
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.1e-22 111.7 131 43.5
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.1e-19 101.7 90 57.8
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.4e-19 99.4 90 55.6
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.9e-16 90.9 90 56.7
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.5e-16 90.5 85 52.9
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.2e-15 85.9 80 58.8
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 5.8e-13 79.3 67 62.7
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 7.6e-13 79.0 38 89.5
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 2.1e-10 70.9 71 54.9
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.6e-07 61.2 61 54.1
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 2.1e-07 60.8 138 30.4
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.8e-07 60.5 33 81.8
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 1.4e-06 58.2 37 67.6


User provided reference genes

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