Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.4e-221 772.7 403 100.0
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 3.9e-99 365.9 308 64.3
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 5.1e-99 365.5 308 64.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.5e-98 364.0 308 64.3
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.9e-94 349.7 308 62.3
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 2.5e-93 346.7 314 61.8
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 3.8e-70 269.6 154 87.0
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 4.1e-56 223.0 267 50.9
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 4.2e-53 213.0 243 51.4
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.6e-52 211.1 207 54.1
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.3e-51 207.2 264 48.1
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.2e-51 206.1 296 43.2
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.2e-51 206.1 264 47.7
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 1.5e-50 204.5 236 50.4
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.5e-50 204.5 266 46.2
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.8e-49 200.3 215 52.1
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 2.8e-49 200.3 240 49.6
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 3.7e-49 199.9 230 48.7
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 4.8e-49 199.5 240 48.3
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 8.3e-49 198.7 207 50.7
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 8.3e-49 198.7 207 48.3
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 3.1e-48 196.8 235 49.4
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 4.1e-48 196.4 207 51.2
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 4.1e-48 196.4 246 47.2
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.1e-48 196.4 257 43.6
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 4.1e-48 196.4 241 48.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 9.1e-48 195.3 240 46.7
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.2e-47 194.9 266 44.0
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 2.0e-47 194.1 251 44.2
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 2.0e-47 194.1 239 46.9
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 1.0e-46 191.8 239 47.3
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.7e-46 191.0 241 46.5
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 2.3e-46 190.7 213 50.2
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 3.8e-46 189.9 247 45.7
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 5.0e-46 189.5 207 50.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 8.6e-46 188.7 207 47.8
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 8.6e-46 188.7 207 49.8
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 8.6e-46 188.7 206 49.5
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.5e-45 188.0 207 48.3
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.5e-45 188.0 233 45.9
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.5e-45 188.0 207 48.8
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.9e-45 187.6 242 43.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 1.9e-45 187.6 210 48.6
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.3e-45 186.8 251 45.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 3.3e-45 186.8 231 47.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 7.2e-45 185.7 207 47.3
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 9.5e-45 185.3 207 47.8
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 9.5e-45 185.3 233 45.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 1.2e-44 184.9 272 43.8
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.1e-44 184.1 207 47.3
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.1e-44 184.1 207 47.8
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.1e-44 184.1 207 48.8
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 2.8e-44 183.7 246 47.6
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 2.8e-44 183.7 241 44.8
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 2.8e-44 183.7 207 50.2
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.6e-44 183.3 213 48.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 6.1e-44 182.6 207 47.3
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.0e-44 182.2 232 47.0
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.0e-43 181.8 231 45.0
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 1.4e-43 181.4 232 45.3
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 2.3e-43 180.6 207 45.9
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.3e-43 180.6 294 42.2
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.0e-43 179.9 232 46.6
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 4.0e-43 179.9 207 46.9
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 4.0e-43 179.9 217 47.0
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 6.8e-43 179.1 233 43.3
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.2e-42 178.3 233 43.8
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 2.0e-42 177.6 216 45.8
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 9.8e-42 175.3 234 43.6
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.3e-41 174.9 226 42.9
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.3e-41 174.9 271 42.8
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 2.8e-41 173.7 231 42.9
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.3e-41 172.6 196 46.9
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 6.3e-41 172.6 271 42.8
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 5.4e-40 169.5 265 42.6
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 9.2e-40 168.7 173 50.9
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.6e-39 167.9 266 41.4
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.6e-39 167.9 244 43.9
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 2.7e-39 167.2 242 44.2
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 2.7e-39 167.2 271 43.2
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.7e-39 167.2 230 40.0
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 5.9e-39 166.0 265 42.6
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 1.3e-38 164.9 265 43.8
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.7e-38 164.5 207 44.0
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 8.6e-38 162.2 242 43.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.5e-37 161.4 204 45.1
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 3.3e-37 160.2 231 42.0
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 2.8e-36 157.1 262 41.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 3.6e-36 156.8 207 41.5
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.4e-35 154.8 230 42.2
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.0e-35 153.7 229 38.9
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 1.2e-34 151.8 232 37.5
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 5.8e-34 149.4 233 40.3
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 6.0e-31 139.4 207 40.6
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 2.5e-29 134.0 120 53.3
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 6.8e-27 125.9 206 38.3
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.6e-26 124.0 273 35.2
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 4.4e-26 123.2 229 35.8
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 9.8e-26 122.1 234 37.6
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.7e-25 121.3 268 36.2
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 8.3e-25 119.0 232 37.1
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 2.4e-24 117.5 96 64.6
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.2e-23 115.2 266 36.1
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.9e-22 110.2 85 65.9
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 3.1e-19 100.5 202 33.7
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.7e-17 94.7 136 41.9
PGSC0003DMG400008511 Solanum tuberosum HOM05D000751 ORTHO05D005618 2.4e-16 90.9 88 60.2
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.1e-15 87.8 207 31.9
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.3e-14 85.1 113 40.7
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.3e-14 85.1 69 63.8
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.9e-14 83.6 159 37.1
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 1.9e-13 81.3 246 30.1
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 2.5e-13 80.9 129 39.5
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 2.5e-13 80.9 127 37.8
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.5e-13 80.9 155 34.8
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.1e-12 77.8 238 31.1
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 4.7e-12 76.6 117 38.5
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 8.1e-12 75.9 82 46.3
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.8e-10 69.7 154 33.8
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 8.4e-09 65.9 125 40.0
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.4e-08 65.1 53 60.4
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.1e-08 63.5 53 52.8
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.2e-08 62.4 53 56.6
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 5.1e-06 56.6 83 42.2


User provided reference genes

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