Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 4.5e-70 268.9 280 100.0
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.7e-21 107.5 118 67.8
Sopen04g027610 Solanum pennellii HOM05D002879 ORTHO05D002930 2.3e-21 107.1 120 79.2
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.2e-15 86.3 105 54.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.3e-13 81.3 98 62.2
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.1e-12 78.2 88 67.0
Peaxi162Scf00599g00008 Petunia axillaris HOM05D041824 ORTHO05D002930 1.9e-12 77.4 115 67.0
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.3e-12 76.3 95 71.6
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.6e-12 75.9 89 57.3
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.1e-11 72.0 111 56.8
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.1e-10 71.6 89 55.1
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 2.4e-10 70.5 128 54.7
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 2.4e-10 70.5 108 52.8
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 3.1e-10 70.1 68 72.1
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 4.0e-10 69.7 105 43.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 5.3e-10 69.3 92 50.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 5.3e-10 69.3 123 52.8
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.9e-10 68.9 110 54.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 9.0e-10 68.6 88 51.1
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.6e-09 67.0 122 50.0
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.4e-09 66.6 88 71.6
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 3.4e-09 66.6 89 73.0
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.4e-09 66.6 89 60.7
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-09 66.6 86 61.6
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 5.8e-09 65.9 99 47.5
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 5.8e-09 65.9 72 69.4
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.6e-09 65.5 70 51.4
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.3e-08 64.7 88 60.2
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.3e-08 64.7 87 60.9
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.7e-08 64.3 99 54.5
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.7e-08 64.3 76 57.9
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-08 64.3 111 54.1
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.7e-08 64.3 111 54.1
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.8e-08 63.2 96 56.2
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 3.8e-08 63.2 79 51.9
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.9e-08 62.8 123 51.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 6.4e-08 62.4 99 51.5
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 8.4e-08 62.0 95 65.3
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 1.1e-07 61.6 71 63.4
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 1.1e-07 61.6 63 69.8
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 1.4e-07 61.2 65 72.3
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.9e-07 60.8 78 57.7
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.9e-07 60.8 58 51.7
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.9e-07 60.8 103 54.4
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 2.4e-07 60.5 81 61.7
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.2e-07 60.1 89 57.3
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 3.2e-07 60.1 89 57.3
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.2e-07 59.7 59 50.8
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.2e-07 59.7 59 50.8
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.2e-07 59.7 59 50.8
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 4.2e-07 59.7 96 56.2
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 4.2e-07 59.7 58 51.7
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.4e-07 59.3 56 69.6
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 7.1e-07 58.9 99 46.5
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.1e-07 58.9 119 51.3
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 7.1e-07 58.9 67 70.1
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.3e-07 58.5 125 55.2
Lj2g0004069 Lotus japonicus HOM05D002879 ORTHO05D002930 9.3e-07 58.5 63 73.0
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 9.3e-07 58.5 86 59.3
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 9.3e-07 58.5 86 59.3
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 9.3e-07 58.5 87 54.0
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.2e-06 58.2 113 57.5
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.6e-06 57.8 127 49.6
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.7e-06 57.0 96 64.6
Ca_12311_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 3.5e-06 56.6 88 68.2
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.5e-06 56.6 90 56.7
TAR381G1351 Trochodendron aralioides HOM05D002879 ORTHO05D002930 3.5e-06 56.6 94 66.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 4.6e-06 56.2 121 47.1
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.6e-06 56.2 67 44.8
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 4.6e-06 56.2 89 67.4
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 4.6e-06 56.2 89 68.5
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 4.6e-06 56.2 123 47.2
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 6.0e-06 55.8 127 56.7
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.0e-06 55.8 51 51.0
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 6.0e-06 55.8 115 59.1
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 6.0e-06 55.8 115 59.1
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 7.9e-06 55.5 85 44.7
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 7.9e-06 55.5 113 47.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 7.9e-06 55.5 89 55.1
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 7.9e-06 55.5 99 64.6
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.9e-06 55.5 122 55.7
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 7.9e-06 55.5 115 56.5
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 7.9e-06 55.5 115 55.7
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.9e-06 55.5 111 48.6


User provided reference genes

Program Settings